RNA–Protein interactions for RNA: ENST00000415645.6

NPIPB4-203, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPB4, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-203ENST00000415645 ZEB1P37275 1124 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-203ENST00000415645 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
NPIPB4-203ENST00000415645 PTPN23Q9H3S7 1636 aa11.18□□□□□ -0.62
NPIPB4-203ENST00000415645 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
NPIPB4-203ENST00000415645 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-203ENST00000415645 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-203ENST00000415645 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-203ENST00000415645 KIF14Q15058 1648 aa11.15□□□□□ -0.62
NPIPB4-203ENST00000415645 AKNAQ7Z591 1439 aa11.15□□□□□ -0.62
NPIPB4-203ENST00000415645 FHOD3Q2V2M9 1422 aa11.15□□□□□ -0.62
NPIPB4-203ENST00000415645 IQGAP3Q86VI3 1631 aa11.15□□□□□ -0.62
NPIPB4-203ENST00000415645 NCBP3Q53F19 620 aaKnown RBP11.14□□□□□ -0.63
NPIPB4-203ENST00000415645 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
NPIPB4-203ENST00000415645 LAMC1P11047 1609 aa11.14□□□□□ -0.63
NPIPB4-203ENST00000415645 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
NPIPB4-203ENST00000415645 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
NPIPB4-203ENST00000415645 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
NPIPB4-203ENST00000415645 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
NPIPB4-203ENST00000415645 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
NPIPB4-203ENST00000415645 CEP152O94986 1710 aa11.12□□□□□ -0.63
NPIPB4-203ENST00000415645 SETD1AO15047 1707 aaKnown RBP11.11□□□□□ -0.63
NPIPB4-203ENST00000415645 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
NPIPB4-203ENST00000415645 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
NPIPB4-203ENST00000415645 RIMS1Q86UR5 1692 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-203ENST00000415645 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-203ENST00000415645 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-203ENST00000415645 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
NPIPB4-203ENST00000415645 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
NPIPB4-203ENST00000415645 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
NPIPB4-203ENST00000415645 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
NPIPB4-203ENST00000415645 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
NPIPB4-203ENST00000415645 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
NPIPB4-203ENST00000415645 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
NPIPB4-203ENST00000415645 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
NPIPB4-203ENST00000415645 MTUS2Q5JR59 1369 aa11.06□□□□□ -0.64
NPIPB4-203ENST00000415645 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
NPIPB4-203ENST00000415645 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
NPIPB4-203ENST00000415645 ZNF142P52746 1687 aaPredicted RBP11.04□□□□□ -0.64
NPIPB4-203ENST00000415645 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
NPIPB4-203ENST00000415645 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
NPIPB4-203ENST00000415645 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
NPIPB4-203ENST00000415645 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
NPIPB4-203ENST00000415645 LMTK2Q8IWU2 1503 aa11.02□□□□□ -0.65
NPIPB4-203ENST00000415645 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
NPIPB4-203ENST00000415645 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
NPIPB4-203ENST00000415645 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
NPIPB4-203ENST00000415645 CENPBP07199 599 aaPredicted RBP11□□□□□ -0.65
NPIPB4-203ENST00000415645 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
NPIPB4-203ENST00000415645 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
NPIPB4-203ENST00000415645 FER1L4A9Z1Z3 1794 aa10.97□□□□□ -0.65
NPIPB4-203ENST00000415645 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.65
NPIPB4-203ENST00000415645 ABCC1P33527 1531 aa10.96□□□□□ -0.65
NPIPB4-203ENST00000415645 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
NPIPB4-203ENST00000415645 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
NPIPB4-203ENST00000415645 KIDINS220Q9ULH0 1771 aa10.96□□□□□ -0.66
NPIPB4-203ENST00000415645 DIEXFQ68CQ4 756 aaKnown RBP10.96□□□□□ -0.66
NPIPB4-203ENST00000415645 RRP7BPQ9NSQ0 103 aa10.96□□□□□ -0.66
NPIPB4-203ENST00000415645 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.66
NPIPB4-203ENST00000415645 MADDQ8WXG6 1647 aa10.96□□□□□ -0.66
NPIPB4-203ENST00000415645 TTC37Q6PGP7 1564 aa10.95□□□□□ -0.66
NPIPB4-203ENST00000415645 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
NPIPB4-203ENST00000415645 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
NPIPB4-203ENST00000415645 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
NPIPB4-203ENST00000415645 PRAG1Q86YV5 1406 aa10.94□□□□□ -0.66
NPIPB4-203ENST00000415645 PRDM15P57071 1507 aaPredicted RBP10.93□□□□□ -0.66
NPIPB4-203ENST00000415645 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
NPIPB4-203ENST00000415645 FMN1Q68DA7 1419 aa10.91□□□□□ -0.66
NPIPB4-203ENST00000415645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.91□□□□□ -0.66
NPIPB4-203ENST00000415645 ATP10AO60312 1499 aa10.9□□□□□ -0.67
NPIPB4-203ENST00000415645 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.67
NPIPB4-203ENST00000415645 CCNB3Q8WWL7 1395 aa10.89□□□□□ -0.67
NPIPB4-203ENST00000415645 PTPRGP23470 1445 aa10.89□□□□□ -0.67
NPIPB4-203ENST00000415645 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
NPIPB4-203ENST00000415645 E9PCH4 1651 aa10.88□□□□□ -0.67
NPIPB4-203ENST00000415645 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
NPIPB4-203ENST00000415645 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
NPIPB4-203ENST00000415645 AGLP35573 1532 aa10.87□□□□□ -0.67
NPIPB4-203ENST00000415645 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
NPIPB4-203ENST00000415645 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPIPB4-203ENST00000415645 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
NPIPB4-203ENST00000415645 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-203ENST00000415645 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
NPIPB4-203ENST00000415645 ZNF644Q9H582 1327 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-203ENST00000415645 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
NPIPB4-203ENST00000415645 ACIN1Q9UKV3 1341 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-203ENST00000415645 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
NPIPB4-203ENST00000415645 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
NPIPB4-203ENST00000415645 KDM6BO15054 1643 aa10.83□□□□□ -0.68
NPIPB4-203ENST00000415645 SPHKAPQ2M3C7 1700 aa10.83□□□□□ -0.68
NPIPB4-203ENST00000415645 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
NPIPB4-203ENST00000415645 ZFYVE16Q7Z3T8 1539 aa10.82□□□□□ -0.68
NPIPB4-203ENST00000415645 HECW2Q9P2P5 1572 aa10.82□□□□□ -0.68
NPIPB4-203ENST00000415645 CDK13Q14004 1512 aaKnown RBP10.82□□□□□ -0.68
NPIPB4-203ENST00000415645 ADAMTSL3P82987 1691 aa10.81□□□□□ -0.68
NPIPB4-203ENST00000415645 EFCAB6Q5THR3 1501 aa10.81□□□□□ -0.68
NPIPB4-203ENST00000415645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.684e-14■■■□□ 17.5
NPIPB4-203ENST00000415645 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
NPIPB4-203ENST00000415645 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
NPIPB4-203ENST00000415645 MIA2Q96PC5 1412 aa10.8□□□□□ -0.68
NPIPB4-203ENST00000415645 DUOX2Q9NRD8 1548 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms