RNA–Protein interactions for RNA: ENST00000415469.5

LINC00858-201, long intergenic non-protein coding RNA 858, humanhuman

TSL 2 BASIC

Gene LINC00858, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-201ENST00000415469 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
LINC00858-201ENST00000415469 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
LINC00858-201ENST00000415469 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
LINC00858-201ENST00000415469 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
LINC00858-201ENST00000415469 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
LINC00858-201ENST00000415469 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
LINC00858-201ENST00000415469 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
LINC00858-201ENST00000415469 CAMSAP2Q08AD1 1489 aa13.31□□□□□ -0.28
LINC00858-201ENST00000415469 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
LINC00858-201ENST00000415469 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
LINC00858-201ENST00000415469 AKNAQ7Z591 1439 aa13.27□□□□□ -0.28
LINC00858-201ENST00000415469 CHD1O14646 1710 aa13.27□□□□□ -0.28
LINC00858-201ENST00000415469 ATP10BO94823 1461 aa13.26□□□□□ -0.29
LINC00858-201ENST00000415469 ABCA8O94911 1581 aa13.26□□□□□ -0.29
LINC00858-201ENST00000415469 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
LINC00858-201ENST00000415469 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
LINC00858-201ENST00000415469 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
LINC00858-201ENST00000415469 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
LINC00858-201ENST00000415469 ROCK1Q13464 1354 aa13.23□□□□□ -0.29
LINC00858-201ENST00000415469 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
LINC00858-201ENST00000415469 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
LINC00858-201ENST00000415469 CDC42BPAQ5VT25 1732 aa13.23□□□□□ -0.29
LINC00858-201ENST00000415469 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
LINC00858-201ENST00000415469 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
LINC00858-201ENST00000415469 PTPRGP23470 1445 aa13.22□□□□□ -0.29
LINC00858-201ENST00000415469 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC00858-201ENST00000415469 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.3
LINC00858-201ENST00000415469 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
LINC00858-201ENST00000415469 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
LINC00858-201ENST00000415469 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
LINC00858-201ENST00000415469 PZPP20742 1482 aa13.19□□□□□ -0.3
LINC00858-201ENST00000415469 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
LINC00858-201ENST00000415469 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
LINC00858-201ENST00000415469 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
LINC00858-201ENST00000415469 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
LINC00858-201ENST00000415469 ANP32CO43423 234 aa13.17□□□□□ -0.3
LINC00858-201ENST00000415469 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
LINC00858-201ENST00000415469 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
LINC00858-201ENST00000415469 PKD2Q13563 968 aa13.16□□□□□ -0.3
LINC00858-201ENST00000415469 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
LINC00858-201ENST00000415469 C9orf84Q5VXU9 1444 aa13.15□□□□□ -0.3
LINC00858-201ENST00000415469 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
LINC00858-201ENST00000415469 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
LINC00858-201ENST00000415469 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
LINC00858-201ENST00000415469 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00858-201ENST00000415469 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
LINC00858-201ENST00000415469 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
LINC00858-201ENST00000415469 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
LINC00858-201ENST00000415469 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
LINC00858-201ENST00000415469 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
LINC00858-201ENST00000415469 NUP155O75694 1391 aa13.11□□□□□ -0.31
LINC00858-201ENST00000415469 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
LINC00858-201ENST00000415469 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
LINC00858-201ENST00000415469 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
LINC00858-201ENST00000415469 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
LINC00858-201ENST00000415469 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
LINC00858-201ENST00000415469 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
LINC00858-201ENST00000415469 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.31
LINC00858-201ENST00000415469 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
LINC00858-201ENST00000415469 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
LINC00858-201ENST00000415469 ARHGAP5Q13017 1502 aa13.07□□□□□ -0.32
LINC00858-201ENST00000415469 PREX2Q70Z35 1606 aa13.07□□□□□ -0.32
LINC00858-201ENST00000415469 BCANQ96GW7 911 aa13.07□□□□□ -0.32
LINC00858-201ENST00000415469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00858-201ENST00000415469 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
LINC00858-201ENST00000415469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00858-201ENST00000415469 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
LINC00858-201ENST00000415469 MYT1Q01538 1121 aa13.06□□□□□ -0.32
LINC00858-201ENST00000415469 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
LINC00858-201ENST00000415469 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
LINC00858-201ENST00000415469 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
LINC00858-201ENST00000415469 CCDC7Q96M83 1385 aa13.04□□□□□ -0.32
LINC00858-201ENST00000415469 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
LINC00858-201ENST00000415469 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
LINC00858-201ENST00000415469 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
LINC00858-201ENST00000415469 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.33
LINC00858-201ENST00000415469 ZCCHC11Q5TAX3 1644 aaKnown RBP13.01□□□□□ -0.33
LINC00858-201ENST00000415469 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
LINC00858-201ENST00000415469 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
LINC00858-201ENST00000415469 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
LINC00858-201ENST00000415469 HNRNPUQ00839 825 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00858-201ENST00000415469 USP47Q96K76 1375 aa12.99□□□□□ -0.33
LINC00858-201ENST00000415469 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
LINC00858-201ENST00000415469 FKBP8Q14318 412 aa12.99□□□□□ -0.33
LINC00858-201ENST00000415469 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
LINC00858-201ENST00000415469 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
LINC00858-201ENST00000415469 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
LINC00858-201ENST00000415469 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
LINC00858-201ENST00000415469 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
LINC00858-201ENST00000415469 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
LINC00858-201ENST00000415469 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
LINC00858-201ENST00000415469 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.34
LINC00858-201ENST00000415469 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
LINC00858-201ENST00000415469 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
LINC00858-201ENST00000415469 KDM5CP41229 1560 aa12.94□□□□□ -0.34
LINC00858-201ENST00000415469 TRAPPC8Q9Y2L5 1435 aa12.93□□□□□ -0.34
LINC00858-201ENST00000415469 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
LINC00858-201ENST00000415469 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
LINC00858-201ENST00000415469 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
LINC00858-201ENST00000415469 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms