RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 SLC4A1APQ9BWU0 796 aaKnown RBP29.28■■■□□ 2.28
SPRN-201ENST00000414069 ZNF326Q5BKZ1 582 aaKnown RBP29.27■■■□□ 2.28
SPRN-201ENST00000414069 L3MBTL2Q969R5 705 aa29.27■■■□□ 2.28
SPRN-201ENST00000414069 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
SPRN-201ENST00000414069 KIAA0556O60303 1618 aa29.23■■■□□ 2.27
SPRN-201ENST00000414069 HSPA5P11021 654 aaKnown RBP29.22■■■□□ 2.27
SPRN-201ENST00000414069 POLR3GLQ9BT43 218 aa29.18■■■□□ 2.26
SPRN-201ENST00000414069 DENND4BO75064 1496 aaPredicted RBP29.17■■■□□ 2.26
SPRN-201ENST00000414069 ABCC5O15440 1437 aa29.15■■■□□ 2.26
SPRN-201ENST00000414069 DAPK1P53355 1430 aa29.15■■■□□ 2.26
SPRN-201ENST00000414069 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
SPRN-201ENST00000414069 TCOF1Q13428 1488 aaKnown RBP29.15■■■□□ 2.26
SPRN-201ENST00000414069 MIA2Q96PC5 1412 aa29.13■■■□□ 2.25
SPRN-201ENST00000414069 PLEKHD1A6NEE1 506 aa29.12■■■□□ 2.25
SPRN-201ENST00000414069 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
SPRN-201ENST00000414069 RAPGEF6Q8TEU7 1601 aa29.1■■■□□ 2.25
SPRN-201ENST00000414069 NBPF8Q3BBV2 869 aa29.09■■■□□ 2.25
SPRN-201ENST00000414069 WASHC2AQ641Q2 1341 aa29.06■■■□□ 2.24
SPRN-201ENST00000414069 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
SPRN-201ENST00000414069 CARMIL2Q6F5E8 1435 aa29.05■■■□□ 2.24
SPRN-201ENST00000414069 C11orf95C9JLR9 678 aaPredicted RBP29.05■■■□□ 2.24
SPRN-201ENST00000414069 HNRNPMP52272 730 aaKnown RBP eCLIP29.05■■■□□ 2.24
SPRN-201ENST00000414069 MAGI1Q96QZ7 1491 aaPredicted RBP29.05■■■□□ 2.24
SPRN-201ENST00000414069 TROQ12816 1431 aaPredicted RBP29.04■■■□□ 2.24
SPRN-201ENST00000414069 FKBP8Q14318 412 aa29.02■■■□□ 2.24
SPRN-201ENST00000414069 KIF14Q15058 1648 aa29.01■■■□□ 2.23
SPRN-201ENST00000414069 PKD2Q13563 968 aa29■■■□□ 2.23
SPRN-201ENST00000414069 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
SPRN-201ENST00000414069 SENP3-EIF4A1A0A087X0R7 540 aa28.98■■■□□ 2.23
SPRN-201ENST00000414069 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
SPRN-201ENST00000414069 GPATCH8Q9UKJ3 1502 aaKnown RBP28.96■■■□□ 2.23
SPRN-201ENST00000414069 KDM2AQ9Y2K7 1162 aa28.95■■■□□ 2.23
SPRN-201ENST00000414069 CCDC184Q52MB2 194 aa28.94■■■□□ 2.22
SPRN-201ENST00000414069 HNRNPUQ00839 825 aaKnown RBP eCLIP28.94■■■□□ 2.22
SPRN-201ENST00000414069 GCC2Q8IWJ2 1684 aa28.94■■■□□ 2.22
SPRN-201ENST00000414069 ANKRD30BQ9BXX2 1392 aa28.94■■■□□ 2.22
SPRN-201ENST00000414069 TSPY4P0CV99 314 aa28.9■■■□□ 2.22
SPRN-201ENST00000414069 TSPY10P0CW01 314 aa28.9■■■□□ 2.22
SPRN-201ENST00000414069 AKNAQ7Z591 1439 aa28.9■■■□□ 2.22
SPRN-201ENST00000414069 NUP160Q12769 1436 aa28.89■■■□□ 2.21
SPRN-201ENST00000414069 NCOA1Q15788 1441 aa28.88■■■□□ 2.21
SPRN-201ENST00000414069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.88■■■□□ 2.21
SPRN-201ENST00000414069 IRX6P78412 446 aaPredicted RBP28.87■■■□□ 2.21
SPRN-201ENST00000414069 PTPRGP23470 1445 aa28.87■■■□□ 2.21
SPRN-201ENST00000414069 ATP10BO94823 1461 aa28.87■■■□□ 2.21
SPRN-201ENST00000414069 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
SPRN-201ENST00000414069 FAM9BQ8IZU0 186 aa28.87■■■□□ 2.21
SPRN-201ENST00000414069 DNMT1P26358 1616 aaKnown RBP28.87■■■□□ 2.21
SPRN-201ENST00000414069 ROCK1Q13464 1354 aa28.86■■■□□ 2.21
SPRN-201ENST00000414069 NUP155O75694 1391 aa28.85■■■□□ 2.21
SPRN-201ENST00000414069 ANKRD30AQ9BXX3 1397 aa28.81■■■□□ 2.2
SPRN-201ENST00000414069 RBM19Q9Y4C8 960 aaKnown RBP28.8■■■□□ 2.2
SPRN-201ENST00000414069 ANKRD50Q9ULJ7 1429 aa28.78■■■□□ 2.2
SPRN-201ENST00000414069 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
SPRN-201ENST00000414069 PZPP20742 1482 aa28.76■■■□□ 2.2
SPRN-201ENST00000414069 RGL3Q3MIN7 710 aa28.76■■■□□ 2.2
SPRN-201ENST00000414069 NEFLP07196 543 aa28.75■■■□□ 2.19
SPRN-201ENST00000414069 KIF7Q2M1P5 1343 aa28.73■■■□□ 2.19
SPRN-201ENST00000414069 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
SPRN-201ENST00000414069 C9orf84Q5VXU9 1444 aa28.72■■■□□ 2.19
SPRN-201ENST00000414069 CCDC7Q96M83 1385 aa28.72■■■□□ 2.19
SPRN-201ENST00000414069 DCAF11Q8TEB1 546 aa28.7■■■□□ 2.18
SPRN-201ENST00000414069 TEX14Q8IWB6 1497 aa28.69■■■□□ 2.18
SPRN-201ENST00000414069 KIF15Q9NS87 1388 aa28.68■■■□□ 2.18
SPRN-201ENST00000414069 PRKRIP1Q9H875 184 aaPredicted RBP28.66■■■□□ 2.18
SPRN-201ENST00000414069 KIAA1107Q9UPP5 1409 aa28.65■■■□□ 2.18
SPRN-201ENST00000414069 ABCA8O94911 1581 aa28.64■■■□□ 2.17
SPRN-201ENST00000414069 MSH5O43196 834 aa28.63■■■□□ 2.17
SPRN-201ENST00000414069 CARD11Q9BXL7 1154 aa28.63■■■□□ 2.17
SPRN-201ENST00000414069 ANO8Q9HCE9 1232 aaPredicted RBP28.62■■■□□ 2.17
SPRN-201ENST00000414069 ITSN2Q9NZM3 1697 aa28.62■■■□□ 2.17
SPRN-201ENST00000414069 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
SPRN-201ENST00000414069 CNTLNQ9NXG0 1405 aa28.61■■■□□ 2.17
SPRN-201ENST00000414069 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
SPRN-201ENST00000414069 ABCC10Q5T3U5 1492 aa28.61■■■□□ 2.17
SPRN-201ENST00000414069 USP47Q96K76 1375 aa28.59■■■□□ 2.17
SPRN-201ENST00000414069 CDC42BPAQ5VT25 1732 aa28.59■■■□□ 2.17
SPRN-201ENST00000414069 MYT1LQ9UL68 1186 aa28.54■■■□□ 2.16
SPRN-201ENST00000414069 ST20-MTHFSA0A0A6YYL1 179 aa28.54■■■□□ 2.16
SPRN-201ENST00000414069 CHD1O14646 1710 aa28.51■■■□□ 2.15
SPRN-201ENST00000414069 ADGRL2O95490 1459 aa28.5■■■□□ 2.15
SPRN-201ENST00000414069 ARHGAP5Q13017 1502 aa28.48■■■□□ 2.15
SPRN-201ENST00000414069 ADCY10Q96PN6 1610 aa28.48■■■□□ 2.15
SPRN-201ENST00000414069 SPATA31E1Q6ZUB1 1445 aa28.47■■■□□ 2.15
SPRN-201ENST00000414069 ADGBQ8N7X0 1667 aa28.46■■■□□ 2.15
SPRN-201ENST00000414069 MBD5Q9P267 1494 aa28.45■■■□□ 2.15
SPRN-201ENST00000414069 NBPF1Q3BBV0 1214 aa28.45■■■□□ 2.15
SPRN-201ENST00000414069 SYCP2Q9BX26 1530 aa28.44■■■□□ 2.14
SPRN-201ENST00000414069 CROCC2H7BZ55 1655 aa28.42■■■□□ 2.14
SPRN-201ENST00000414069 AFAP1Q8N556 730 aa28.41■■■□□ 2.14
SPRN-201ENST00000414069 SALL2Q9Y467 1007 aaPredicted RBP28.41■■■□□ 2.14
SPRN-201ENST00000414069 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
SPRN-201ENST00000414069 CCDC141Q6ZP82 1450 aa28.4■■■□□ 2.14
SPRN-201ENST00000414069 TTC37Q6PGP7 1564 aa28.37■■■□□ 2.13
SPRN-201ENST00000414069 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
SPRN-201ENST00000414069 DEKP35659 375 aaKnown RBP28.35■■■□□ 2.13
SPRN-201ENST00000414069 PLEKHH2Q8IVE3 1493 aa28.35■■■□□ 2.13
SPRN-201ENST00000414069 CDC42BPBQ9Y5S2 1711 aa28.34■■■□□ 2.13
SPRN-201ENST00000414069 CCDC136Q96JN2 1154 aa28.34■■■□□ 2.13
SPRN-201ENST00000414069 BCORL1Q5H9F3 1711 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms