RNA–Protein interactions for RNA: ENST00000413833.1

LINC00421-201, long intergenic non-protein coding RNA 421, humanhuman

TSL 1 (best) BASIC

Gene LINC00421, Length 1,054 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00421-201ENST00000413833 ARHGEF12Q9NZN5 1544 aa30.14■■■□□ 2.42
LINC00421-201ENST00000413833 MYO5CQ9NQX4 1742 aa30.13■■■□□ 2.41
LINC00421-201ENST00000413833 ATP10AO60312 1499 aa30.09■■■□□ 2.41
LINC00421-201ENST00000413833 PLPPR3Q6T4P5 718 aa30.08■■■□□ 2.41
LINC00421-201ENST00000413833 KIF14Q15058 1648 aa30.07■■■□□ 2.4
LINC00421-201ENST00000413833 MLECQ14165 292 aa30.07■■■□□ 2.4
LINC00421-201ENST00000413833 C9orf84Q5VXU9 1444 aa30.06■■■□□ 2.4
LINC00421-201ENST00000413833 ARHGAP35Q9NRY4 1499 aa30.06■■■□□ 2.4
LINC00421-201ENST00000413833 PREX1Q8TCU6 1659 aa30.04■■■□□ 2.4
LINC00421-201ENST00000413833 FMN1Q68DA7 1419 aa30.04■■■□□ 2.4
LINC00421-201ENST00000413833 LRRIQ1Q96JM4 1722 aa30.03■■■□□ 2.4
LINC00421-201ENST00000413833 KDM5CP41229 1560 aa30.02■■■□□ 2.4
LINC00421-201ENST00000413833 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.39
LINC00421-201ENST00000413833 CERKQ8TCT0 537 aa29.99■■■□□ 2.39
LINC00421-201ENST00000413833 ZNF518AQ6AHZ1 1483 aa29.98■■■□□ 2.39
LINC00421-201ENST00000413833 STRCQ7RTU9 1775 aa29.97■■■□□ 2.39
LINC00421-201ENST00000413833 TROQ12816 1431 aaPredicted RBP29.96■■■□□ 2.39
LINC00421-201ENST00000413833 CDC42BPBQ9Y5S2 1711 aa29.94■■■□□ 2.38
LINC00421-201ENST00000413833 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
LINC00421-201ENST00000413833 CEBPAP49715 358 aaPredicted RBP29.93■■■□□ 2.38
LINC00421-201ENST00000413833 REREQ9P2R6 1566 aa29.93■■■□□ 2.38
LINC00421-201ENST00000413833 SETD1BQ9UPS6 1966 aaKnown RBP29.92■■■□□ 2.38
LINC00421-201ENST00000413833 ARHGAP5Q13017 1502 aa29.91■■■□□ 2.38
LINC00421-201ENST00000413833 ATP1B4Q9UN42 357 aaPredicted RBP29.91■■■□□ 2.38
LINC00421-201ENST00000413833 CDK11AQ9UQ88 783 aaPredicted RBP29.91■■■□□ 2.38
LINC00421-201ENST00000413833 AFAP1Q8N556 730 aa29.9■■■□□ 2.38
LINC00421-201ENST00000413833 UBTFP17480 764 aaKnown RBP29.89■■■□□ 2.38
LINC00421-201ENST00000413833 ABCA6Q8N139 1617 aa29.89■■■□□ 2.37
LINC00421-201ENST00000413833 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
LINC00421-201ENST00000413833 MLH3Q9UHC1 1453 aa29.85■■■□□ 2.37
LINC00421-201ENST00000413833 C3P01024 1663 aa29.84■■■□□ 2.37
LINC00421-201ENST00000413833 PREX2Q70Z35 1606 aa29.83■■■□□ 2.37
LINC00421-201ENST00000413833 CLIP1P30622 1438 aa29.83■■■□□ 2.37
LINC00421-201ENST00000413833 ABCC1P33527 1531 aa29.81■■■□□ 2.36
LINC00421-201ENST00000413833 AGLP35573 1532 aa29.81■■■□□ 2.36
LINC00421-201ENST00000413833 UHRF1BP1Q6BDS2 1440 aa29.8■■■□□ 2.36
LINC00421-201ENST00000413833 ITSN2Q9NZM3 1697 aa29.8■■■□□ 2.36
LINC00421-201ENST00000413833 TRAPPC8Q9Y2L5 1435 aa29.79■■■□□ 2.36
LINC00421-201ENST00000413833 KIDINS220Q9ULH0 1771 aa29.77■■■□□ 2.36
LINC00421-201ENST00000413833 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
LINC00421-201ENST00000413833 DMRT2Q9Y5R5 561 aa29.73■■■□□ 2.35
LINC00421-201ENST00000413833 PTPRTO14522 1441 aa29.71■■■□□ 2.35
LINC00421-201ENST00000413833 CASKIN1Q8WXD9 1431 aa29.71■■■□□ 2.35
LINC00421-201ENST00000413833 CCDC18Q5T9S5 1454 aa29.69■■■□□ 2.34
LINC00421-201ENST00000413833 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
LINC00421-201ENST00000413833 MYT1LQ9UL68 1186 aa29.67■■■□□ 2.34
LINC00421-201ENST00000413833 LTBP4Q8N2S1 1624 aa29.65■■■□□ 2.34
LINC00421-201ENST00000413833 SAMD9LQ8IVG5 1584 aa29.64■■■□□ 2.33
LINC00421-201ENST00000413833 MROH2AA6NES4 1674 aa29.61■■■□□ 2.33
LINC00421-201ENST00000413833 CNTLNQ9NXG0 1405 aa29.61■■■□□ 2.33
LINC00421-201ENST00000413833 NCOA1Q15788 1441 aa29.6■■■□□ 2.33
LINC00421-201ENST00000413833 FYCO1Q9BQS8 1478 aa29.56■■■□□ 2.32
LINC00421-201ENST00000413833 ILDR2Q71H61 639 aa29.56■■■□□ 2.32
LINC00421-201ENST00000413833 SYCP2Q9BX26 1530 aa29.55■■■□□ 2.32
LINC00421-201ENST00000413833 GPATCH8Q9UKJ3 1502 aaKnown RBP29.54■■■□□ 2.32
LINC00421-201ENST00000413833 NPATQ14207 1427 aa29.54■■■□□ 2.32
LINC00421-201ENST00000413833 ESF1Q9H501 851 aaKnown RBP29.53■■■□□ 2.32
LINC00421-201ENST00000413833 SUPT6HQ7KZ85 1726 aaKnown RBP29.52■■■□□ 2.32
LINC00421-201ENST00000413833 IQSEC2Q5JU85 1478 aa29.52■■■□□ 2.32
LINC00421-201ENST00000413833 DISP3Q9P2K9 1392 aa29.52■■■□□ 2.32
LINC00421-201ENST00000413833 CAMSAP1Q5T5Y3 1602 aa29.5■■■□□ 2.31
LINC00421-201ENST00000413833 PLXNC1O60486 1568 aa29.5■■■□□ 2.31
LINC00421-201ENST00000413833 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
LINC00421-201ENST00000413833 ATP7AQ04656 1500 aa29.47■■■□□ 2.31
LINC00421-201ENST00000413833 ZMYM3Q14202 1370 aa29.47■■■□□ 2.31
LINC00421-201ENST00000413833 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
LINC00421-201ENST00000413833 ZNF142P52746 1687 aaPredicted RBP29.46■■■□□ 2.31
LINC00421-201ENST00000413833 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.3
LINC00421-201ENST00000413833 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.3
LINC00421-201ENST00000413833 HNRNPMP52272 730 aaKnown RBP eCLIP29.44■■■□□ 2.3
LINC00421-201ENST00000413833 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
LINC00421-201ENST00000413833 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
LINC00421-201ENST00000413833 MYO3AQ8NEV4 1616 aa29.42■■■□□ 2.3
LINC00421-201ENST00000413833 A2MP01023 1474 aa29.4■■■□□ 2.3
LINC00421-201ENST00000413833 SOCS7O14512 581 aa29.39■■■□□ 2.3
LINC00421-201ENST00000413833 PLEKHH2Q8IVE3 1493 aa29.38■■■□□ 2.29
LINC00421-201ENST00000413833 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
LINC00421-201ENST00000413833 PLA2R1Q13018 1463 aa29.36■■■□□ 2.29
LINC00421-201ENST00000413833 CEP170BQ9Y4F5 1589 aaPredicted RBP29.35■■■□□ 2.29
LINC00421-201ENST00000413833 NCKAP5LQ9HCH0 1330 aa29.35■■■□□ 2.29
LINC00421-201ENST00000413833 TCOF1Q13428 1488 aaKnown RBP29.35■■■□□ 2.29
LINC00421-201ENST00000413833 ADGBQ8N7X0 1667 aa29.34■■■□□ 2.29
LINC00421-201ENST00000413833 CFDP1Q9UEE9 299 aaPredicted RBP29.32■■■□□ 2.28
LINC00421-201ENST00000413833 ZNF335Q9H4Z2 1342 aaPredicted RBP29.31■■■□□ 2.28
LINC00421-201ENST00000413833 CCNB3Q8WWL7 1395 aa29.3■■■□□ 2.28
LINC00421-201ENST00000413833 TIAM1Q13009 1591 aa29.29■■■□□ 2.28
LINC00421-201ENST00000413833 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
LINC00421-201ENST00000413833 PKD2Q13563 968 aa29.27■■■□□ 2.28
LINC00421-201ENST00000413833 GGT6Q6P531 493 aa29.25■■■□□ 2.27
LINC00421-201ENST00000413833 PPP6R1Q9UPN7 881 aa29.24■■■□□ 2.27
LINC00421-201ENST00000413833 DNMT1P26358 1616 aaKnown RBP29.23■■■□□ 2.27
LINC00421-201ENST00000413833 ZNF644Q9H582 1327 aaPredicted RBP29.23■■■□□ 2.27
LINC00421-201ENST00000413833 MTUS2Q5JR59 1369 aa29.23■■■□□ 2.27
LINC00421-201ENST00000413833 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.27
LINC00421-201ENST00000413833 A2ML1A8K2U0 1454 aa29.2■■■□□ 2.26
LINC00421-201ENST00000413833 EHBP1L1Q8N3D4 1523 aa29.19■■■□□ 2.26
LINC00421-201ENST00000413833 UBAP1LF5GYI3 381 aa29.16■■■□□ 2.26
LINC00421-201ENST00000413833 DHX29Q7Z478 1369 aaKnown RBP29.15■■■□□ 2.26
LINC00421-201ENST00000413833 POLR1AO95602 1720 aaPredicted RBP29.15■■■□□ 2.26
LINC00421-201ENST00000413833 NEURL4Q96JN8 1562 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms