RNA–Protein interactions for RNA: ENST00000413644.6

CD164-204, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-204ENST00000413644 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
CD164-204ENST00000413644 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
CD164-204ENST00000413644 ABCA8O94911 1581 aa17.29■□□□□ 0.36
CD164-204ENST00000413644 DAPK1P53355 1430 aa17.29■□□□□ 0.36
CD164-204ENST00000413644 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
CD164-204ENST00000413644 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
CD164-204ENST00000413644 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
CD164-204ENST00000413644 KDM6BO15054 1643 aa17.28■□□□□ 0.36
CD164-204ENST00000413644 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
CD164-204ENST00000413644 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
CD164-204ENST00000413644 ABCC5O15440 1437 aa17.27■□□□□ 0.36
CD164-204ENST00000413644 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
CD164-204ENST00000413644 KIF14Q15058 1648 aa17.25■□□□□ 0.35
CD164-204ENST00000413644 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
CD164-204ENST00000413644 GPATCH8Q9UKJ3 1502 aaKnown RBP17.24■□□□□ 0.35
CD164-204ENST00000413644 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
CD164-204ENST00000413644 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
CD164-204ENST00000413644 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
CD164-204ENST00000413644 ATP10BO94823 1461 aa17.23■□□□□ 0.35
CD164-204ENST00000413644 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
CD164-204ENST00000413644 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
CD164-204ENST00000413644 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
CD164-204ENST00000413644 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
CD164-204ENST00000413644 PTPRGP23470 1445 aa17.2■□□□□ 0.34
CD164-204ENST00000413644 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
CD164-204ENST00000413644 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
CD164-204ENST00000413644 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
CD164-204ENST00000413644 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
CD164-204ENST00000413644 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
CD164-204ENST00000413644 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
CD164-204ENST00000413644 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
CD164-204ENST00000413644 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
CD164-204ENST00000413644 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
CD164-204ENST00000413644 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
CD164-204ENST00000413644 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
CD164-204ENST00000413644 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
CD164-204ENST00000413644 FOXD1Q16676 465 aa17.09■□□□□ 0.33
CD164-204ENST00000413644 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
CD164-204ENST00000413644 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
CD164-204ENST00000413644 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
CD164-204ENST00000413644 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
CD164-204ENST00000413644 ANKRD30BQ9BXX2 1392 aa17.07■□□□□ 0.32
CD164-204ENST00000413644 ANKRD30AQ9BXX3 1397 aa17.07■□□□□ 0.32
CD164-204ENST00000413644 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
CD164-204ENST00000413644 FAM69CQ0P6D2 419 aa17.05■□□□□ 0.32
CD164-204ENST00000413644 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
CD164-204ENST00000413644 GLI2P10070 1586 aa17.04■□□□□ 0.32
CD164-204ENST00000413644 PZPP20742 1482 aa17.04■□□□□ 0.32
CD164-204ENST00000413644 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
CD164-204ENST00000413644 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.32
CD164-204ENST00000413644 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
CD164-204ENST00000413644 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
CD164-204ENST00000413644 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
CD164-204ENST00000413644 PREX2Q70Z35 1606 aa17■□□□□ 0.31
CD164-204ENST00000413644 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
CD164-204ENST00000413644 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.314e-8■■■□□ 18.4
CD164-204ENST00000413644 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
CD164-204ENST00000413644 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
CD164-204ENST00000413644 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
CD164-204ENST00000413644 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
CD164-204ENST00000413644 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
CD164-204ENST00000413644 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
CD164-204ENST00000413644 TEX14Q8IWB6 1497 aa16.96■□□□□ 0.31
CD164-204ENST00000413644 TTC37Q6PGP7 1564 aa16.96■□□□□ 0.31
CD164-204ENST00000413644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■□□□ 12.7
CD164-204ENST00000413644 KIAA1107Q9UPP5 1409 aa16.95■□□□□ 0.3
CD164-204ENST00000413644 TSPOAP1O95153 1857 aa16.95■□□□□ 0.3
CD164-204ENST00000413644 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
CD164-204ENST00000413644 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
CD164-204ENST00000413644 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
CD164-204ENST00000413644 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
CD164-204ENST00000413644 PKD2Q13563 968 aa16.94■□□□□ 0.3
CD164-204ENST00000413644 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
CD164-204ENST00000413644 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
CD164-204ENST00000413644 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
CD164-204ENST00000413644 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
CD164-204ENST00000413644 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
CD164-204ENST00000413644 MAP3K4Q9Y6R4 1608 aa16.91■□□□□ 0.3
CD164-204ENST00000413644 NUP155O75694 1391 aa16.91■□□□□ 0.3
CD164-204ENST00000413644 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
CD164-204ENST00000413644 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
CD164-204ENST00000413644 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
CD164-204ENST00000413644 ANP32CO43423 234 aa16.89■□□□□ 0.29
CD164-204ENST00000413644 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
CD164-204ENST00000413644 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
CD164-204ENST00000413644 WASHC2AQ641Q2 1341 aa16.86■□□□□ 0.29
CD164-204ENST00000413644 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
CD164-204ENST00000413644 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
CD164-204ENST00000413644 WDR7Q9Y4E6 1490 aa16.85■□□□□ 0.29
CD164-204ENST00000413644 PLCH2O75038 1416 aa16.84■□□□□ 0.29
CD164-204ENST00000413644 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
CD164-204ENST00000413644 SPATA31E1Q6ZUB1 1445 aa16.81■□□□□ 0.28
CD164-204ENST00000413644 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
CD164-204ENST00000413644 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
CD164-204ENST00000413644 FAM135AQ9P2D6 1515 aa16.79■□□□□ 0.28
CD164-204ENST00000413644 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
CD164-204ENST00000413644 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
CD164-204ENST00000413644 UNC13BO14795 1591 aa16.77■□□□□ 0.28
CD164-204ENST00000413644 ABCC1P33527 1531 aa16.76■□□□□ 0.27
CD164-204ENST00000413644 UHRF1BP1Q6BDS2 1440 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms