RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ABCC5O15440 1437 aa20.84■□□□□ 0.93
TTC39A-208ENST00000413473 HNRNPUQ00839 825 aaKnown RBP eCLIP20.84■□□□□ 0.93
TTC39A-208ENST00000413473 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.93
TTC39A-208ENST00000413473 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.92
TTC39A-208ENST00000413473 KIAA0556O60303 1618 aa20.83■□□□□ 0.92
TTC39A-208ENST00000413473 CDK11AQ9UQ88 783 aaPredicted RBP20.83■□□□□ 0.92
TTC39A-208ENST00000413473 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
TTC39A-208ENST00000413473 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
TTC39A-208ENST00000413473 NBPF8Q3BBV2 869 aa20.8■□□□□ 0.92
TTC39A-208ENST00000413473 DNMT1P26358 1616 aaKnown RBP20.79■□□□□ 0.92
TTC39A-208ENST00000413473 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
TTC39A-208ENST00000413473 RAPGEF6Q8TEU7 1601 aa20.77■□□□□ 0.92
TTC39A-208ENST00000413473 CNTLNQ9NXG0 1405 aa20.77■□□□□ 0.92
TTC39A-208ENST00000413473 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
TTC39A-208ENST00000413473 CCDC7Q96M83 1385 aa20.75■□□□□ 0.91
TTC39A-208ENST00000413473 NCOA1Q15788 1441 aa20.75■□□□□ 0.91
TTC39A-208ENST00000413473 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
TTC39A-208ENST00000413473 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
TTC39A-208ENST00000413473 CFDP1Q9UEE9 299 aaPredicted RBP20.74■□□□□ 0.91
TTC39A-208ENST00000413473 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
TTC39A-208ENST00000413473 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
TTC39A-208ENST00000413473 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
TTC39A-208ENST00000413473 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
TTC39A-208ENST00000413473 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
TTC39A-208ENST00000413473 ZNF777Q9ULD5 760 aaPredicted RBP20.69■□□□□ 0.9
TTC39A-208ENST00000413473 PLB1Q6P1J6 1458 aa20.68■□□□□ 0.9
TTC39A-208ENST00000413473 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
TTC39A-208ENST00000413473 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
TTC39A-208ENST00000413473 IRX6P78412 446 aaPredicted RBP20.66■□□□□ 0.9
TTC39A-208ENST00000413473 FBLN2P98095 1184 aa20.66■□□□□ 0.9
TTC39A-208ENST00000413473 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
TTC39A-208ENST00000413473 PZPP20742 1482 aa20.66■□□□□ 0.9
TTC39A-208ENST00000413473 GPATCH8Q9UKJ3 1502 aaKnown RBP20.66■□□□□ 0.9
TTC39A-208ENST00000413473 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
TTC39A-208ENST00000413473 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
TTC39A-208ENST00000413473 MRS2Q9HD23 443 aa20.64■□□□□ 0.9
TTC39A-208ENST00000413473 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
TTC39A-208ENST00000413473 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
TTC39A-208ENST00000413473 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
TTC39A-208ENST00000413473 KIF14Q15058 1648 aa20.61■□□□□ 0.89
TTC39A-208ENST00000413473 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
TTC39A-208ENST00000413473 PKD2Q13563 968 aa20.6■□□□□ 0.89
TTC39A-208ENST00000413473 ITSN2Q9NZM3 1697 aa20.6■□□□□ 0.89
TTC39A-208ENST00000413473 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
TTC39A-208ENST00000413473 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
TTC39A-208ENST00000413473 CARMIL2Q6F5E8 1435 aa20.58■□□□□ 0.89
TTC39A-208ENST00000413473 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
TTC39A-208ENST00000413473 ANKRD30AQ9BXX3 1397 aa20.58■□□□□ 0.88
TTC39A-208ENST00000413473 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.88
TTC39A-208ENST00000413473 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
TTC39A-208ENST00000413473 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
TTC39A-208ENST00000413473 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
TTC39A-208ENST00000413473 ADCY10Q96PN6 1610 aa20.55■□□□□ 0.88
TTC39A-208ENST00000413473 ANKRD50Q9ULJ7 1429 aa20.54■□□□□ 0.88
TTC39A-208ENST00000413473 POLR1AO95602 1720 aaPredicted RBP20.54■□□□□ 0.88
TTC39A-208ENST00000413473 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
TTC39A-208ENST00000413473 MBD5Q9P267 1494 aa20.53■□□□□ 0.88
TTC39A-208ENST00000413473 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
TTC39A-208ENST00000413473 USP47Q96K76 1375 aa20.52■□□□□ 0.88
TTC39A-208ENST00000413473 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
TTC39A-208ENST00000413473 CROCC2H7BZ55 1655 aa20.51■□□□□ 0.87
TTC39A-208ENST00000413473 NUP160Q12769 1436 aa20.51■□□□□ 0.87
TTC39A-208ENST00000413473 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
TTC39A-208ENST00000413473 NUP155O75694 1391 aa20.49■□□□□ 0.87
TTC39A-208ENST00000413473 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
TTC39A-208ENST00000413473 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
TTC39A-208ENST00000413473 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
TTC39A-208ENST00000413473 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
TTC39A-208ENST00000413473 ATP10BO94823 1461 aa20.47■□□□□ 0.87
TTC39A-208ENST00000413473 BCORL1Q5H9F3 1711 aa20.46■□□□□ 0.87
TTC39A-208ENST00000413473 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.87
TTC39A-208ENST00000413473 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
TTC39A-208ENST00000413473 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
TTC39A-208ENST00000413473 ABCA8O94911 1581 aa20.43■□□□□ 0.86
TTC39A-208ENST00000413473 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
TTC39A-208ENST00000413473 ARID4BQ4LE39 1312 aaPredicted RBP20.42■□□□□ 0.86
TTC39A-208ENST00000413473 CARD11Q9BXL7 1154 aa20.41■□□□□ 0.86
TTC39A-208ENST00000413473 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
TTC39A-208ENST00000413473 KDM5CP41229 1560 aa20.41■□□□□ 0.86
TTC39A-208ENST00000413473 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
TTC39A-208ENST00000413473 UHRF1BP1Q6BDS2 1440 aa20.4■□□□□ 0.86
TTC39A-208ENST00000413473 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
TTC39A-208ENST00000413473 B4GALNT3Q6L9W6 998 aa20.38■□□□□ 0.85
TTC39A-208ENST00000413473 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
TTC39A-208ENST00000413473 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
TTC39A-208ENST00000413473 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
TTC39A-208ENST00000413473 MSH5O43196 834 aa20.34■□□□□ 0.85
TTC39A-208ENST00000413473 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
TTC39A-208ENST00000413473 KDM5DQ9BY66 1539 aa20.33■□□□□ 0.85
TTC39A-208ENST00000413473 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.85
TTC39A-208ENST00000413473 PTPRGP23470 1445 aa20.32■□□□□ 0.84
TTC39A-208ENST00000413473 SMG6Q86US8 1419 aaKnown RBP20.32■□□□□ 0.84
TTC39A-208ENST00000413473 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
TTC39A-208ENST00000413473 TMC1Q8TDI8 760 aa20.32■□□□□ 0.84
TTC39A-208ENST00000413473 FANCIQ9NVI1 1328 aa20.31■□□□□ 0.84
TTC39A-208ENST00000413473 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
TTC39A-208ENST00000413473 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
TTC39A-208ENST00000413473 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
TTC39A-208ENST00000413473 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
TTC39A-208ENST00000413473 RSPH4AQ5TD94 716 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms