RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.7
COPS7B-210ENST00000413197 ABCA8O94911 1581 aa19.39■□□□□ 0.69
COPS7B-210ENST00000413197 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
COPS7B-210ENST00000413197 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
COPS7B-210ENST00000413197 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
COPS7B-210ENST00000413197 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
COPS7B-210ENST00000413197 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
COPS7B-210ENST00000413197 UACAQ9BZF9 1416 aa19.33■□□□□ 0.69
COPS7B-210ENST00000413197 TULP1O00294 542 aaPredicted RBP19.32■□□□□ 0.68
COPS7B-210ENST00000413197 ATP10BO94823 1461 aa19.31■□□□□ 0.68
COPS7B-210ENST00000413197 HOMEZQ8IX15 550 aa19.31■□□□□ 0.68
COPS7B-210ENST00000413197 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
COPS7B-210ENST00000413197 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
COPS7B-210ENST00000413197 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
COPS7B-210ENST00000413197 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
COPS7B-210ENST00000413197 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
COPS7B-210ENST00000413197 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
COPS7B-210ENST00000413197 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.68
COPS7B-210ENST00000413197 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
COPS7B-210ENST00000413197 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
COPS7B-210ENST00000413197 CCDC18Q5T9S5 1454 aa19.27■□□□□ 0.68
COPS7B-210ENST00000413197 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
COPS7B-210ENST00000413197 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
COPS7B-210ENST00000413197 KDM5BQ9UGL1 1544 aa19.23■□□□□ 0.67
COPS7B-210ENST00000413197 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
COPS7B-210ENST00000413197 MSH5O43196 834 aa19.22■□□□□ 0.67
COPS7B-210ENST00000413197 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
COPS7B-210ENST00000413197 FANCIQ9NVI1 1328 aa19.21■□□□□ 0.67
COPS7B-210ENST00000413197 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
COPS7B-210ENST00000413197 KIF14Q15058 1648 aa19.18■□□□□ 0.66
COPS7B-210ENST00000413197 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
COPS7B-210ENST00000413197 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
COPS7B-210ENST00000413197 EHBP1L1Q8N3D4 1523 aa19.17■□□□□ 0.66
COPS7B-210ENST00000413197 NAIPQ13075 1403 aa19.17■□□□□ 0.66
COPS7B-210ENST00000413197 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
COPS7B-210ENST00000413197 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.66
COPS7B-210ENST00000413197 ERICH6BQ5W0A0 696 aa19.14■□□□□ 0.66
COPS7B-210ENST00000413197 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
COPS7B-210ENST00000413197 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
COPS7B-210ENST00000413197 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
COPS7B-210ENST00000413197 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
COPS7B-210ENST00000413197 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
COPS7B-210ENST00000413197 UBE2Q2Q8WVN8 375 aa19.07■□□□□ 0.64
COPS7B-210ENST00000413197 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
COPS7B-210ENST00000413197 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
COPS7B-210ENST00000413197 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
COPS7B-210ENST00000413197 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
COPS7B-210ENST00000413197 ABCC10Q5T3U5 1492 aa19.04■□□□□ 0.64
COPS7B-210ENST00000413197 TTC37Q6PGP7 1564 aa19.03■□□□□ 0.64
COPS7B-210ENST00000413197 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
COPS7B-210ENST00000413197 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
COPS7B-210ENST00000413197 PPP4R2Q9NY27 417 aa19.03■□□□□ 0.64
COPS7B-210ENST00000413197 KCNA4P22459 653 aa19.01■□□□□ 0.63
COPS7B-210ENST00000413197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
COPS7B-210ENST00000413197 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
COPS7B-210ENST00000413197 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
COPS7B-210ENST00000413197 NPM1P06748 294 aaKnown RBP eCLIP19■□□□□ 0.63
COPS7B-210ENST00000413197 GCC2Q8IWJ2 1684 aa19■□□□□ 0.63
COPS7B-210ENST00000413197 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
COPS7B-210ENST00000413197 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.633e-10■■■■■ 43
COPS7B-210ENST00000413197 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
COPS7B-210ENST00000413197 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
COPS7B-210ENST00000413197 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
COPS7B-210ENST00000413197 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
COPS7B-210ENST00000413197 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
COPS7B-210ENST00000413197 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
COPS7B-210ENST00000413197 CCDC184Q52MB2 194 aa18.96■□□□□ 0.63
COPS7B-210ENST00000413197 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
COPS7B-210ENST00000413197 PRKRIP1Q9H875 184 aaPredicted RBP18.94■□□□□ 0.62
COPS7B-210ENST00000413197 ZBED9Q6R2W3 1325 aa18.94■□□□□ 0.62
COPS7B-210ENST00000413197 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
COPS7B-210ENST00000413197 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
COPS7B-210ENST00000413197 CDC42BPBQ9Y5S2 1711 aa18.92■□□□□ 0.62
COPS7B-210ENST00000413197 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
COPS7B-210ENST00000413197 KDM6BO15054 1643 aa18.9■□□□□ 0.62
COPS7B-210ENST00000413197 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-210ENST00000413197 MIA2Q96PC5 1412 aa18.88■□□□□ 0.61
COPS7B-210ENST00000413197 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
COPS7B-210ENST00000413197 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
COPS7B-210ENST00000413197 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
COPS7B-210ENST00000413197 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
COPS7B-210ENST00000413197 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
COPS7B-210ENST00000413197 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
COPS7B-210ENST00000413197 ARHGAP5Q13017 1502 aa18.86■□□□□ 0.61
COPS7B-210ENST00000413197 HNRNPMP52272 730 aaKnown RBP eCLIP18.85■□□□□ 0.614e-7■■■■□ 19.8
COPS7B-210ENST00000413197 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
COPS7B-210ENST00000413197 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
COPS7B-210ENST00000413197 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
COPS7B-210ENST00000413197 MYO5CQ9NQX4 1742 aa18.85■□□□□ 0.61
COPS7B-210ENST00000413197 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
COPS7B-210ENST00000413197 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
COPS7B-210ENST00000413197 PLCH2O75038 1416 aa18.84■□□□□ 0.61
COPS7B-210ENST00000413197 SPATA31E1Q6ZUB1 1445 aa18.84■□□□□ 0.61
COPS7B-210ENST00000413197 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
COPS7B-210ENST00000413197 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.6
COPS7B-210ENST00000413197 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
COPS7B-210ENST00000413197 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
COPS7B-210ENST00000413197 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
COPS7B-210ENST00000413197 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
COPS7B-210ENST00000413197 ABCC5O15440 1437 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms