RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
HMGN1P34-201ENST00000413023 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.37
HMGN1P34-201ENST00000413023 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
HMGN1P34-201ENST00000413023 DAPK1P53355 1430 aa12.76□□□□□ -0.37
HMGN1P34-201ENST00000413023 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
HMGN1P34-201ENST00000413023 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
HMGN1P34-201ENST00000413023 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
HMGN1P34-201ENST00000413023 CAMSAP2Q08AD1 1489 aa12.73□□□□□ -0.37
HMGN1P34-201ENST00000413023 AKNAQ7Z591 1439 aa12.73□□□□□ -0.37
HMGN1P34-201ENST00000413023 KDM6BO15054 1643 aa12.72□□□□□ -0.37
HMGN1P34-201ENST00000413023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.71□□□□□ -0.38
HMGN1P34-201ENST00000413023 ROCK1Q13464 1354 aa12.7□□□□□ -0.38
HMGN1P34-201ENST00000413023 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
HMGN1P34-201ENST00000413023 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
HMGN1P34-201ENST00000413023 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
HMGN1P34-201ENST00000413023 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
HMGN1P34-201ENST00000413023 DENND4BO75064 1496 aaPredicted RBP12.68□□□□□ -0.38
HMGN1P34-201ENST00000413023 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
HMGN1P34-201ENST00000413023 TTC37Q6PGP7 1564 aa12.67□□□□□ -0.38
HMGN1P34-201ENST00000413023 PLCH2O75038 1416 aa12.66□□□□□ -0.38
HMGN1P34-201ENST00000413023 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
HMGN1P34-201ENST00000413023 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
HMGN1P34-201ENST00000413023 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
HMGN1P34-201ENST00000413023 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
HMGN1P34-201ENST00000413023 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
HMGN1P34-201ENST00000413023 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
HMGN1P34-201ENST00000413023 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
HMGN1P34-201ENST00000413023 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
HMGN1P34-201ENST00000413023 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
HMGN1P34-201ENST00000413023 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
HMGN1P34-201ENST00000413023 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
HMGN1P34-201ENST00000413023 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
HMGN1P34-201ENST00000413023 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
HMGN1P34-201ENST00000413023 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P34-201ENST00000413023 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
HMGN1P34-201ENST00000413023 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
HMGN1P34-201ENST00000413023 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
HMGN1P34-201ENST00000413023 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
HMGN1P34-201ENST00000413023 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
HMGN1P34-201ENST00000413023 PZPP20742 1482 aa12.56□□□□□ -0.4
HMGN1P34-201ENST00000413023 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
HMGN1P34-201ENST00000413023 SYCP2Q9BX26 1530 aa12.56□□□□□ -0.4
HMGN1P34-201ENST00000413023 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
HMGN1P34-201ENST00000413023 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
HMGN1P34-201ENST00000413023 ANKRD30BQ9BXX2 1392 aa12.54□□□□□ -0.4
HMGN1P34-201ENST00000413023 KIF15Q9NS87 1388 aa12.54□□□□□ -0.4
HMGN1P34-201ENST00000413023 MYO5CQ9NQX4 1742 aa12.53□□□□□ -0.4
HMGN1P34-201ENST00000413023 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
HMGN1P34-201ENST00000413023 ABCA9Q8IUA7 1624 aa12.52□□□□□ -0.4
HMGN1P34-201ENST00000413023 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 PKD2Q13563 968 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 ACIN1Q9UKV3 1341 aaKnown RBP12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
HMGN1P34-201ENST00000413023 NUP155O75694 1391 aa12.5□□□□□ -0.41
HMGN1P34-201ENST00000413023 ABCC1P33527 1531 aa12.5□□□□□ -0.41
HMGN1P34-201ENST00000413023 FANCAO15360 1455 aa12.49□□□□□ -0.41
HMGN1P34-201ENST00000413023 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
HMGN1P34-201ENST00000413023 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
HMGN1P34-201ENST00000413023 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
HMGN1P34-201ENST00000413023 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
HMGN1P34-201ENST00000413023 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
HMGN1P34-201ENST00000413023 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
HMGN1P34-201ENST00000413023 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
HMGN1P34-201ENST00000413023 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
HMGN1P34-201ENST00000413023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGN1P34-201ENST00000413023 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
HMGN1P34-201ENST00000413023 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
HMGN1P34-201ENST00000413023 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
HMGN1P34-201ENST00000413023 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
HMGN1P34-201ENST00000413023 PLXNC1O60486 1568 aa12.41□□□□□ -0.42
HMGN1P34-201ENST00000413023 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
HMGN1P34-201ENST00000413023 RAPGEF3O95398 923 aa12.4□□□□□ -0.42
HMGN1P34-201ENST00000413023 FAM69CQ0P6D2 419 aa12.4□□□□□ -0.42
HMGN1P34-201ENST00000413023 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
HMGN1P34-201ENST00000413023 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
HMGN1P34-201ENST00000413023 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
HMGN1P34-201ENST00000413023 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
HMGN1P34-201ENST00000413023 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
HMGN1P34-201ENST00000413023 TEX14Q8IWB6 1497 aa12.37□□□□□ -0.43
HMGN1P34-201ENST00000413023 UNC13BO14795 1591 aa12.36□□□□□ -0.43
HMGN1P34-201ENST00000413023 GLI2P10070 1586 aa12.36□□□□□ -0.43
HMGN1P34-201ENST00000413023 KIF3BO15066 747 aa12.36□□□□□ -0.43
HMGN1P34-201ENST00000413023 MIER1Q8N108 512 aa12.36□□□□□ -0.43
HMGN1P34-201ENST00000413023 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
HMGN1P34-201ENST00000413023 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms