RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
ATRIP-204ENST00000412052 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
ATRIP-204ENST00000412052 DAPK1P53355 1430 aa19.78■□□□□ 0.76
ATRIP-204ENST00000412052 ABCC5O15440 1437 aa19.77■□□□□ 0.76
ATRIP-204ENST00000412052 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
ATRIP-204ENST00000412052 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
ATRIP-204ENST00000412052 ANKRD30BQ9BXX2 1392 aa19.76■□□□□ 0.75
ATRIP-204ENST00000412052 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
ATRIP-204ENST00000412052 CCDC7Q96M83 1385 aa19.75■□□□□ 0.75
ATRIP-204ENST00000412052 NUP153P49790 1475 aaKnown RBP19.74■□□□□ 0.75
ATRIP-204ENST00000412052 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
ATRIP-204ENST00000412052 NCOA1Q15788 1441 aa19.72■□□□□ 0.75
ATRIP-204ENST00000412052 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
ATRIP-204ENST00000412052 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
ATRIP-204ENST00000412052 PRKRIP1Q9H875 184 aaPredicted RBP19.72■□□□□ 0.75
ATRIP-204ENST00000412052 RPRD2Q5VT52 1461 aaKnown RBP19.71■□□□□ 0.75
ATRIP-204ENST00000412052 KIAA0556O60303 1618 aa19.7■□□□□ 0.74
ATRIP-204ENST00000412052 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
ATRIP-204ENST00000412052 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
ATRIP-204ENST00000412052 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
ATRIP-204ENST00000412052 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
ATRIP-204ENST00000412052 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
ATRIP-204ENST00000412052 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
ATRIP-204ENST00000412052 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
ATRIP-204ENST00000412052 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
ATRIP-204ENST00000412052 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
ATRIP-204ENST00000412052 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
ATRIP-204ENST00000412052 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
ATRIP-204ENST00000412052 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
ATRIP-204ENST00000412052 PZPP20742 1482 aa19.63■□□□□ 0.73
ATRIP-204ENST00000412052 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
ATRIP-204ENST00000412052 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
ATRIP-204ENST00000412052 MSH5O43196 834 aa19.61■□□□□ 0.73
ATRIP-204ENST00000412052 CAMSAP2Q08AD1 1489 aa19.61■□□□□ 0.73
ATRIP-204ENST00000412052 FBLN2P98095 1184 aa19.61■□□□□ 0.73
ATRIP-204ENST00000412052 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
ATRIP-204ENST00000412052 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
ATRIP-204ENST00000412052 KIF14Q15058 1648 aa19.6■□□□□ 0.73
ATRIP-204ENST00000412052 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.72
ATRIP-204ENST00000412052 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
ATRIP-204ENST00000412052 PKD2Q13563 968 aa19.57■□□□□ 0.72
ATRIP-204ENST00000412052 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
ATRIP-204ENST00000412052 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
ATRIP-204ENST00000412052 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
ATRIP-204ENST00000412052 BCORL1Q5H9F3 1711 aa19.53■□□□□ 0.72
ATRIP-204ENST00000412052 ZBED9Q6R2W3 1325 aa19.53■□□□□ 0.72
ATRIP-204ENST00000412052 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
ATRIP-204ENST00000412052 USP47Q96K76 1375 aa19.52■□□□□ 0.72
ATRIP-204ENST00000412052 CEP170Q5SW79 1584 aa19.52■□□□□ 0.72
ATRIP-204ENST00000412052 DHX29Q7Z478 1369 aaKnown RBP19.51■□□□□ 0.71
ATRIP-204ENST00000412052 MBD5Q9P267 1494 aa19.5■□□□□ 0.71
ATRIP-204ENST00000412052 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
ATRIP-204ENST00000412052 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
ATRIP-204ENST00000412052 POLR1AO95602 1720 aaPredicted RBP19.48■□□□□ 0.71
ATRIP-204ENST00000412052 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
ATRIP-204ENST00000412052 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
ATRIP-204ENST00000412052 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
ATRIP-204ENST00000412052 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
ATRIP-204ENST00000412052 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
ATRIP-204ENST00000412052 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
ATRIP-204ENST00000412052 NUP155O75694 1391 aa19.44■□□□□ 0.7
ATRIP-204ENST00000412052 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
ATRIP-204ENST00000412052 ADGRL2O95490 1459 aa19.43■□□□□ 0.7
ATRIP-204ENST00000412052 KDM5CP41229 1560 aa19.41■□□□□ 0.7
ATRIP-204ENST00000412052 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
ATRIP-204ENST00000412052 HNRNPMP52272 730 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATRIP-204ENST00000412052 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
ATRIP-204ENST00000412052 SYNJ2O15056 1496 aa19.39■□□□□ 0.7
ATRIP-204ENST00000412052 ADCY10Q96PN6 1610 aa19.39■□□□□ 0.69
ATRIP-204ENST00000412052 C9orf84Q5VXU9 1444 aa19.38■□□□□ 0.69
ATRIP-204ENST00000412052 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
ATRIP-204ENST00000412052 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
ATRIP-204ENST00000412052 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
ATRIP-204ENST00000412052 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
ATRIP-204ENST00000412052 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
ATRIP-204ENST00000412052 ERICH6BQ5W0A0 696 aa19.37■□□□□ 0.69
ATRIP-204ENST00000412052 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
ATRIP-204ENST00000412052 ATP10BO94823 1461 aa19.35■□□□□ 0.69
ATRIP-204ENST00000412052 CARMIL2Q6F5E8 1435 aa19.35■□□□□ 0.69
ATRIP-204ENST00000412052 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
ATRIP-204ENST00000412052 SMG6Q86US8 1419 aaKnown RBP19.33■□□□□ 0.68
ATRIP-204ENST00000412052 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
ATRIP-204ENST00000412052 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
ATRIP-204ENST00000412052 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
ATRIP-204ENST00000412052 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
ATRIP-204ENST00000412052 NUP160Q12769 1436 aa19.32■□□□□ 0.68
ATRIP-204ENST00000412052 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
ATRIP-204ENST00000412052 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
ATRIP-204ENST00000412052 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
ATRIP-204ENST00000412052 ABCA8O94911 1581 aa19.3■□□□□ 0.68
ATRIP-204ENST00000412052 SALL2Q9Y467 1007 aaPredicted RBP19.3■□□□□ 0.68
ATRIP-204ENST00000412052 UHRF1BP1Q6BDS2 1440 aa19.3■□□□□ 0.68
ATRIP-204ENST00000412052 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
ATRIP-204ENST00000412052 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
ATRIP-204ENST00000412052 SHANK2Q9UPX8 1470 aa19.25■□□□□ 0.67
ATRIP-204ENST00000412052 ROCK2O75116 1388 aaKnown RBP19.25■□□□□ 0.67
ATRIP-204ENST00000412052 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
ATRIP-204ENST00000412052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.67
ATRIP-204ENST00000412052 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
ATRIP-204ENST00000412052 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms