RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 CFDP1Q9UEE9 299 aaPredicted RBP30.13■■■□□ 2.41
ITSN2-205ENST00000412011 ABCC2Q92887 1545 aa30.12■■■□□ 2.41
ITSN2-205ENST00000412011 KDM6BO15054 1643 aa30.08■■■□□ 2.41
ITSN2-205ENST00000412011 ROCK1Q13464 1354 aa30.08■■■□□ 2.41
ITSN2-205ENST00000412011 DIEXFQ68CQ4 756 aaKnown RBP30.03■■■□□ 2.4
ITSN2-205ENST00000412011 SIN3AQ96ST3 1273 aa30.03■■■□□ 2.4
ITSN2-205ENST00000412011 CROCC2H7BZ55 1655 aa30.03■■■□□ 2.4
ITSN2-205ENST00000412011 ZNF777Q9ULD5 760 aaPredicted RBP30■■■□□ 2.39
ITSN2-205ENST00000412011 ADGBQ8N7X0 1667 aa30■■■□□ 2.39
ITSN2-205ENST00000412011 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
ITSN2-205ENST00000412011 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
ITSN2-205ENST00000412011 ZCCHC11Q5TAX3 1644 aaKnown RBP29.95■■■□□ 2.38
ITSN2-205ENST00000412011 PREX2Q70Z35 1606 aa29.95■■■□□ 2.38
ITSN2-205ENST00000412011 CDC42BPBQ9Y5S2 1711 aa29.95■■■□□ 2.38
ITSN2-205ENST00000412011 ADGRL2O95490 1459 aa29.91■■■□□ 2.38
ITSN2-205ENST00000412011 TIMELESSQ9UNS1 1208 aa29.91■■■□□ 2.38
ITSN2-205ENST00000412011 TTC37Q6PGP7 1564 aa29.9■■■□□ 2.38
ITSN2-205ENST00000412011 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
ITSN2-205ENST00000412011 DENND4BO75064 1496 aaPredicted RBP29.89■■■□□ 2.38
ITSN2-205ENST00000412011 TRIM52Q96A61 297 aa29.89■■■□□ 2.37
ITSN2-205ENST00000412011 NCOA1Q15788 1441 aa29.89■■■□□ 2.37
ITSN2-205ENST00000412011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.88■■■□□ 2.37
ITSN2-205ENST00000412011 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
ITSN2-205ENST00000412011 ACIN1Q9UKV3 1341 aaKnown RBP29.85■■■□□ 2.37
ITSN2-205ENST00000412011 SHANK2Q9UPX8 1470 aa29.84■■■□□ 2.37
ITSN2-205ENST00000412011 ARHGEF5Q12774 1597 aa29.84■■■□□ 2.37
ITSN2-205ENST00000412011 MYO5CQ9NQX4 1742 aa29.83■■■□□ 2.37
ITSN2-205ENST00000412011 ANKRD30AQ9BXX3 1397 aa29.8■■■□□ 2.36
ITSN2-205ENST00000412011 MPHOSPH9Q99550 1183 aa29.8■■■□□ 2.36
ITSN2-205ENST00000412011 MBD5Q9P267 1494 aa29.79■■■□□ 2.36
ITSN2-205ENST00000412011 C9orf84Q5VXU9 1444 aa29.78■■■□□ 2.36
ITSN2-205ENST00000412011 ARHGAP5Q13017 1502 aa29.77■■■□□ 2.36
ITSN2-205ENST00000412011 OSCARQ8IYS5 282 aa29.76■■■□□ 2.36
ITSN2-205ENST00000412011 HNRNPMP52272 730 aaKnown RBP eCLIP29.76■■■□□ 2.35
ITSN2-205ENST00000412011 TONSLQ96HA7 1378 aa29.74■■■□□ 2.35
ITSN2-205ENST00000412011 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
ITSN2-205ENST00000412011 KCNH8Q96L42 1107 aa29.74■■■□□ 2.35
ITSN2-205ENST00000412011 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
ITSN2-205ENST00000412011 TSPY4P0CV99 314 aa29.71■■■□□ 2.35
ITSN2-205ENST00000412011 TSPY10P0CW01 314 aa29.71■■■□□ 2.35
ITSN2-205ENST00000412011 SYCP2Q9BX26 1530 aa29.69■■■□□ 2.34
ITSN2-205ENST00000412011 ANKRD50Q9ULJ7 1429 aa29.68■■■□□ 2.34
ITSN2-205ENST00000412011 PZPP20742 1482 aa29.67■■■□□ 2.34
ITSN2-205ENST00000412011 RSPH4AQ5TD94 716 aa29.66■■■□□ 2.34
ITSN2-205ENST00000412011 PLCH2O75038 1416 aa29.65■■■□□ 2.34
ITSN2-205ENST00000412011 PLEKHH2Q8IVE3 1493 aa29.64■■■□□ 2.34
ITSN2-205ENST00000412011 FOXD1Q16676 465 aa29.63■■■□□ 2.33
ITSN2-205ENST00000412011 KIAA1107Q9UPP5 1409 aa29.63■■■□□ 2.33
ITSN2-205ENST00000412011 MAST1Q9Y2H9 1570 aa29.63■■■□□ 2.33
ITSN2-205ENST00000412011 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
ITSN2-205ENST00000412011 ANKRD30BQ9BXX2 1392 aa29.61■■■□□ 2.33
ITSN2-205ENST00000412011 WDR7Q9Y4E6 1490 aa29.61■■■□□ 2.33
ITSN2-205ENST00000412011 KIF15Q9NS87 1388 aa29.61■■■□□ 2.33
ITSN2-205ENST00000412011 ARHGEF12Q9NZN5 1544 aa29.56■■■□□ 2.32
ITSN2-205ENST00000412011 ARAP3Q8WWN8 1544 aa29.54■■■□□ 2.32
ITSN2-205ENST00000412011 EFCAB2Q5VUJ9 269 aa29.54■■■□□ 2.32
ITSN2-205ENST00000412011 ABCC1P33527 1531 aa29.53■■■□□ 2.32
ITSN2-205ENST00000412011 KDM5DQ9BY66 1539 aa29.52■■■□□ 2.32
ITSN2-205ENST00000412011 RPRD2Q5VT52 1461 aaKnown RBP29.52■■■□□ 2.32
ITSN2-205ENST00000412011 MIER1Q8N108 512 aa29.52■■■□□ 2.32
ITSN2-205ENST00000412011 PLXNC1O60486 1568 aa29.51■■■□□ 2.31
ITSN2-205ENST00000412011 ABCA9Q8IUA7 1624 aa29.5■■■□□ 2.31
ITSN2-205ENST00000412011 ASXL2Q76L83 1435 aa29.48■■■□□ 2.31
ITSN2-205ENST00000412011 NUP155O75694 1391 aa29.47■■■□□ 2.31
ITSN2-205ENST00000412011 PKD2Q13563 968 aa29.44■■■□□ 2.3
ITSN2-205ENST00000412011 L3MBTL2Q969R5 705 aa29.42■■■□□ 2.3
ITSN2-205ENST00000412011 TEX14Q8IWB6 1497 aa29.41■■■□□ 2.3
ITSN2-205ENST00000412011 TRAPPC8Q9Y2L5 1435 aa29.41■■■□□ 2.3
ITSN2-205ENST00000412011 UNC13BO14795 1591 aa29.39■■■□□ 2.3
ITSN2-205ENST00000412011 DUOX2Q9NRD8 1548 aa29.37■■■□□ 2.29
ITSN2-205ENST00000412011 NPM1P06748 294 aaKnown RBP eCLIP29.36■■■□□ 2.29
ITSN2-205ENST00000412011 FANCAO15360 1455 aa29.36■■■□□ 2.29
ITSN2-205ENST00000412011 FAM135AQ9P2D6 1515 aa29.34■■■□□ 2.29
ITSN2-205ENST00000412011 HIRIP3Q9BW71 556 aaPredicted RBP29.33■■■□□ 2.29
ITSN2-205ENST00000412011 ERBINQ96RT1 1412 aa29.3■■■□□ 2.28
ITSN2-205ENST00000412011 ZFYVE16Q7Z3T8 1539 aa29.29■■■□□ 2.28
ITSN2-205ENST00000412011 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
ITSN2-205ENST00000412011 IQGAP3Q86VI3 1631 aa29.27■■■□□ 2.28
ITSN2-205ENST00000412011 SPAG9O60271 1321 aaKnown RBP29.27■■■□□ 2.28
ITSN2-205ENST00000412011 AFAP1Q8N556 730 aa29.27■■■□□ 2.28
ITSN2-205ENST00000412011 ADGRL1O94910 1474 aa29.24■■■□□ 2.27
ITSN2-205ENST00000412011 MAGI2Q86UL8 1455 aa29.24■■■□□ 2.27
ITSN2-205ENST00000412011 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
ITSN2-205ENST00000412011 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
ITSN2-205ENST00000412011 SCAPERQ9BY12 1400 aa29.21■■■□□ 2.27
ITSN2-205ENST00000412011 DDX10Q13206 875 aaKnown RBP29.21■■■□□ 2.27
ITSN2-205ENST00000412011 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
ITSN2-205ENST00000412011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.19■■■□□ 2.262e-6■■□□□ 14.5
ITSN2-205ENST00000412011 HSPA5P11021 654 aaKnown RBP29.16■■■□□ 2.26
ITSN2-205ENST00000412011 CD109Q6YHK3 1445 aa29.15■■■□□ 2.26
ITSN2-205ENST00000412011 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
ITSN2-205ENST00000412011 EIF4G2P78344 907 aaKnown RBP eCLIP29.13■■■□□ 2.25
ITSN2-205ENST00000412011 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
ITSN2-205ENST00000412011 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
ITSN2-205ENST00000412011 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
ITSN2-205ENST00000412011 CENPBP07199 599 aaPredicted RBP29.1■■■□□ 2.25
ITSN2-205ENST00000412011 DEPDC5O75140 1603 aa29.1■■■□□ 2.25
ITSN2-205ENST00000412011 PLA2R1Q13018 1463 aa29.09■■■□□ 2.25
ITSN2-205ENST00000412011 YTHDC1Q96MU7 727 aaKnown RBP29.08■■■□□ 2.25
ITSN2-205ENST00000412011 KIDINS220Q9ULH0 1771 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms