RNA–Protein interactions for RNA: ENST00000411638.6

NELFA-203, Transcript of negative elongation factor complex member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFA, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-203ENST00000411638 CDC42BPAQ5VT25 1732 aa23.34■■□□□ 1.33
NELFA-203ENST00000411638 ZNF644Q9H582 1327 aaPredicted RBP23.34■■□□□ 1.33
NELFA-203ENST00000411638 CAMSAP2Q08AD1 1489 aa23.33■■□□□ 1.33
NELFA-203ENST00000411638 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.32
NELFA-203ENST00000411638 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
NELFA-203ENST00000411638 KDM6BO15054 1643 aa23.29■■□□□ 1.32
NELFA-203ENST00000411638 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
NELFA-203ENST00000411638 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
NELFA-203ENST00000411638 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
NELFA-203ENST00000411638 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
NELFA-203ENST00000411638 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
NELFA-203ENST00000411638 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
NELFA-203ENST00000411638 ADGRL2O95490 1459 aa23.22■■□□□ 1.31
NELFA-203ENST00000411638 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
NELFA-203ENST00000411638 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
NELFA-203ENST00000411638 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
NELFA-203ENST00000411638 NCOA1Q15788 1441 aa23.19■■□□□ 1.3
NELFA-203ENST00000411638 CDC42BPBQ9Y5S2 1711 aa23.17■■□□□ 1.3
NELFA-203ENST00000411638 PREX2Q70Z35 1606 aa23.17■■□□□ 1.3
NELFA-203ENST00000411638 ZNF777Q9ULD5 760 aaPredicted RBP23.17■■□□□ 1.3
NELFA-203ENST00000411638 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
NELFA-203ENST00000411638 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
NELFA-203ENST00000411638 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
NELFA-203ENST00000411638 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
NELFA-203ENST00000411638 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
NELFA-203ENST00000411638 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
NELFA-203ENST00000411638 ZCCHC11Q5TAX3 1644 aaKnown RBP23.12■■□□□ 1.29
NELFA-203ENST00000411638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.292e-7■■■■□ 26.2
NELFA-203ENST00000411638 ANKRD30AQ9BXX3 1397 aa23.1■■□□□ 1.29
NELFA-203ENST00000411638 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
NELFA-203ENST00000411638 SAMD9LQ8IVG5 1584 aa23.1■■□□□ 1.29
NELFA-203ENST00000411638 TTC37Q6PGP7 1564 aa23.09■■□□□ 1.29
NELFA-203ENST00000411638 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
NELFA-203ENST00000411638 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
NELFA-203ENST00000411638 MYO5CQ9NQX4 1742 aa23.06■■□□□ 1.28
NELFA-203ENST00000411638 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
NELFA-203ENST00000411638 MIER1Q8N108 512 aa23.02■■□□□ 1.28
NELFA-203ENST00000411638 PZPP20742 1482 aa23.01■■□□□ 1.27
NELFA-203ENST00000411638 CCDC141Q6ZP82 1450 aa23.01■■□□□ 1.27
NELFA-203ENST00000411638 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
NELFA-203ENST00000411638 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
NELFA-203ENST00000411638 HNRNPMP52272 730 aaKnown RBP eCLIP23.01■■□□□ 1.276e-7■■■■□ 23.8
NELFA-203ENST00000411638 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
NELFA-203ENST00000411638 ANKRD30BQ9BXX2 1392 aa23■■□□□ 1.27
NELFA-203ENST00000411638 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
NELFA-203ENST00000411638 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
NELFA-203ENST00000411638 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
NELFA-203ENST00000411638 PLEKHH2Q8IVE3 1493 aa22.96■■□□□ 1.27
NELFA-203ENST00000411638 PLCH2O75038 1416 aa22.96■■□□□ 1.27
NELFA-203ENST00000411638 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
NELFA-203ENST00000411638 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
NELFA-203ENST00000411638 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
NELFA-203ENST00000411638 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
NELFA-203ENST00000411638 RPRD2Q5VT52 1461 aaKnown RBP22.93■■□□□ 1.26
NELFA-203ENST00000411638 KDM5DQ9BY66 1539 aa22.93■■□□□ 1.26
NELFA-203ENST00000411638 FOXD1Q16676 465 aa22.93■■□□□ 1.26
NELFA-203ENST00000411638 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
NELFA-203ENST00000411638 ARAP3Q8WWN8 1544 aa22.9■■□□□ 1.26
NELFA-203ENST00000411638 WDR7Q9Y4E6 1490 aa22.87■■□□□ 1.25
NELFA-203ENST00000411638 ARHGEF12Q9NZN5 1544 aa22.87■■□□□ 1.25
NELFA-203ENST00000411638 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
NELFA-203ENST00000411638 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
NELFA-203ENST00000411638 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
NELFA-203ENST00000411638 ABCC1P33527 1531 aa22.84■■□□□ 1.25
NELFA-203ENST00000411638 TEX14Q8IWB6 1497 aa22.84■■□□□ 1.25
NELFA-203ENST00000411638 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
NELFA-203ENST00000411638 NUP155O75694 1391 aa22.83■■□□□ 1.25
NELFA-203ENST00000411638 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.24
NELFA-203ENST00000411638 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
NELFA-203ENST00000411638 PKD2Q13563 968 aa22.81■■□□□ 1.24
NELFA-203ENST00000411638 UNC13BO14795 1591 aa22.77■■□□□ 1.24
NELFA-203ENST00000411638 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
NELFA-203ENST00000411638 DUOX2Q9NRD8 1548 aa22.76■■□□□ 1.23
NELFA-203ENST00000411638 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
NELFA-203ENST00000411638 FAM135AQ9P2D6 1515 aa22.74■■□□□ 1.23
NELFA-203ENST00000411638 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
NELFA-203ENST00000411638 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
NELFA-203ENST00000411638 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
NELFA-203ENST00000411638 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
NELFA-203ENST00000411638 DDX10Q13206 875 aaKnown RBP22.69■■□□□ 1.22
NELFA-203ENST00000411638 NBPF8Q3BBV2 869 aa22.69■■□□□ 1.22
NELFA-203ENST00000411638 FANCAO15360 1455 aa22.69■■□□□ 1.22
NELFA-203ENST00000411638 MAGI2Q86UL8 1455 aa22.69■■□□□ 1.22
NELFA-203ENST00000411638 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
NELFA-203ENST00000411638 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
NELFA-203ENST00000411638 ZFYVE16Q7Z3T8 1539 aa22.65■■□□□ 1.22
NELFA-203ENST00000411638 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
NELFA-203ENST00000411638 EIF4G2P78344 907 aaKnown RBP eCLIP22.64■■□□□ 1.21
NELFA-203ENST00000411638 SPAG9O60271 1321 aaKnown RBP22.63■■□□□ 1.21
NELFA-203ENST00000411638 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
NELFA-203ENST00000411638 INO80Q9ULG1 1556 aaPredicted RBP22.61■■□□□ 1.21
NELFA-203ENST00000411638 UHRF1BP1Q6BDS2 1440 aa22.6■■□□□ 1.21
NELFA-203ENST00000411638 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
NELFA-203ENST00000411638 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
NELFA-203ENST00000411638 SCAPERQ9BY12 1400 aa22.58■■□□□ 1.21
NELFA-203ENST00000411638 ATP7AQ04656 1500 aa22.57■■□□□ 1.2
NELFA-203ENST00000411638 ATP10AO60312 1499 aa22.56■■□□□ 1.2
NELFA-203ENST00000411638 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
NELFA-203ENST00000411638 DEPDC5O75140 1603 aa22.55■■□□□ 1.2
NELFA-203ENST00000411638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.54■■□□□ 1.22e-6■■■■□ 20.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms