RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
HLA-DQB2-229ENST00000411527 SIGLEC1Q9BZZ2 1709 aa23.62■■□□□ 1.37
HLA-DQB2-229ENST00000411527 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
HLA-DQB2-229ENST00000411527 MLECQ14165 292 aa23.59■■□□□ 1.37
HLA-DQB2-229ENST00000411527 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
HLA-DQB2-229ENST00000411527 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
HLA-DQB2-229ENST00000411527 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.37
HLA-DQB2-229ENST00000411527 MYO5CQ9NQX4 1742 aa23.57■■□□□ 1.36
HLA-DQB2-229ENST00000411527 HSPA2P54652 639 aa23.56■■□□□ 1.36
HLA-DQB2-229ENST00000411527 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
HLA-DQB2-229ENST00000411527 KIF14Q15058 1648 aa23.52■■□□□ 1.36
HLA-DQB2-229ENST00000411527 ATP10AO60312 1499 aa23.52■■□□□ 1.36
HLA-DQB2-229ENST00000411527 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
HLA-DQB2-229ENST00000411527 TROQ12816 1431 aaPredicted RBP23.48■■□□□ 1.35
HLA-DQB2-229ENST00000411527 C9orf84Q5VXU9 1444 aa23.48■■□□□ 1.35
HLA-DQB2-229ENST00000411527 CLIP1P30622 1438 aa23.46■■□□□ 1.35
HLA-DQB2-229ENST00000411527 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
HLA-DQB2-229ENST00000411527 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
HLA-DQB2-229ENST00000411527 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
HLA-DQB2-229ENST00000411527 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
HLA-DQB2-229ENST00000411527 ZNF518AQ6AHZ1 1483 aa23.44■■□□□ 1.34
HLA-DQB2-229ENST00000411527 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
HLA-DQB2-229ENST00000411527 CEBPAP49715 358 aaPredicted RBP23.41■■□□□ 1.34
HLA-DQB2-229ENST00000411527 KDM5CP41229 1560 aa23.4■■□□□ 1.34
HLA-DQB2-229ENST00000411527 CDC42BPBQ9Y5S2 1711 aa23.39■■□□□ 1.34
HLA-DQB2-229ENST00000411527 PREX1Q8TCU6 1659 aa23.36■■□□□ 1.33
HLA-DQB2-229ENST00000411527 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
HLA-DQB2-229ENST00000411527 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.33
HLA-DQB2-229ENST00000411527 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
HLA-DQB2-229ENST00000411527 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
HLA-DQB2-229ENST00000411527 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
HLA-DQB2-229ENST00000411527 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
HLA-DQB2-229ENST00000411527 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
HLA-DQB2-229ENST00000411527 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
HLA-DQB2-229ENST00000411527 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
HLA-DQB2-229ENST00000411527 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
HLA-DQB2-229ENST00000411527 ABCC1P33527 1531 aa23.28■■□□□ 1.32
HLA-DQB2-229ENST00000411527 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
HLA-DQB2-229ENST00000411527 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
HLA-DQB2-229ENST00000411527 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
HLA-DQB2-229ENST00000411527 UHRF1BP1Q6BDS2 1440 aa23.25■■□□□ 1.31
HLA-DQB2-229ENST00000411527 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
HLA-DQB2-229ENST00000411527 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
HLA-DQB2-229ENST00000411527 C3P01024 1663 aa23.23■■□□□ 1.31
HLA-DQB2-229ENST00000411527 ZNF777Q9ULD5 760 aaPredicted RBP23.23■■□□□ 1.31
HLA-DQB2-229ENST00000411527 AGLP35573 1532 aa23.23■■□□□ 1.31
HLA-DQB2-229ENST00000411527 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
HLA-DQB2-229ENST00000411527 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
HLA-DQB2-229ENST00000411527 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
HLA-DQB2-229ENST00000411527 HNRNPMP52272 730 aaKnown RBP eCLIP23.15■■□□□ 1.3
HLA-DQB2-229ENST00000411527 GPATCH8Q9UKJ3 1502 aaKnown RBP23.14■■□□□ 1.3
HLA-DQB2-229ENST00000411527 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
HLA-DQB2-229ENST00000411527 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
HLA-DQB2-229ENST00000411527 CNTLNQ9NXG0 1405 aa23.13■■□□□ 1.29
HLA-DQB2-229ENST00000411527 PTPRTO14522 1441 aa23.1■■□□□ 1.29
HLA-DQB2-229ENST00000411527 CFDP1Q9UEE9 299 aaPredicted RBP23.1■■□□□ 1.29
HLA-DQB2-229ENST00000411527 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
HLA-DQB2-229ENST00000411527 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
HLA-DQB2-229ENST00000411527 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
HLA-DQB2-229ENST00000411527 ATP7AQ04656 1500 aa23.06■■□□□ 1.28
HLA-DQB2-229ENST00000411527 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
HLA-DQB2-229ENST00000411527 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
HLA-DQB2-229ENST00000411527 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
HLA-DQB2-229ENST00000411527 MTUS2Q5JR59 1369 aa23.04■■□□□ 1.28
HLA-DQB2-229ENST00000411527 NPATQ14207 1427 aa23.03■■□□□ 1.28
HLA-DQB2-229ENST00000411527 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
HLA-DQB2-229ENST00000411527 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
HLA-DQB2-229ENST00000411527 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
HLA-DQB2-229ENST00000411527 A2MP01023 1474 aa23.01■■□□□ 1.27
HLA-DQB2-229ENST00000411527 GGT6Q6P531 493 aa23■■□□□ 1.27
HLA-DQB2-229ENST00000411527 CAMSAP1Q5T5Y3 1602 aa23■■□□□ 1.27
HLA-DQB2-229ENST00000411527 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
HLA-DQB2-229ENST00000411527 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
HLA-DQB2-229ENST00000411527 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
HLA-DQB2-229ENST00000411527 ADGBQ8N7X0 1667 aa22.95■■□□□ 1.26
HLA-DQB2-229ENST00000411527 NCKAP5LQ9HCH0 1330 aa22.95■■□□□ 1.26
HLA-DQB2-229ENST00000411527 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
HLA-DQB2-229ENST00000411527 DISP3Q9P2K9 1392 aa22.93■■□□□ 1.26
HLA-DQB2-229ENST00000411527 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
HLA-DQB2-229ENST00000411527 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
HLA-DQB2-229ENST00000411527 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
HLA-DQB2-229ENST00000411527 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
HLA-DQB2-229ENST00000411527 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
HLA-DQB2-229ENST00000411527 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
HLA-DQB2-229ENST00000411527 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
HLA-DQB2-229ENST00000411527 PKD2Q13563 968 aa22.88■■□□□ 1.25
HLA-DQB2-229ENST00000411527 CEP170BQ9Y4F5 1589 aaPredicted RBP22.88■■□□□ 1.25
HLA-DQB2-229ENST00000411527 RTEL1-TNFRSF6BF6WH68 1400 aa22.87■■□□□ 1.25
HLA-DQB2-229ENST00000411527 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
HLA-DQB2-229ENST00000411527 ZNF335Q9H4Z2 1342 aaPredicted RBP22.86■■□□□ 1.25
HLA-DQB2-229ENST00000411527 PLA2R1Q13018 1463 aa22.85■■□□□ 1.25
HLA-DQB2-229ENST00000411527 ILDR2Q71H61 639 aa22.85■■□□□ 1.25
HLA-DQB2-229ENST00000411527 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
HLA-DQB2-229ENST00000411527 TCOF1Q13428 1488 aaKnown RBP22.82■■□□□ 1.24
HLA-DQB2-229ENST00000411527 KIF3BO15066 747 aa22.81■■□□□ 1.24
HLA-DQB2-229ENST00000411527 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
HLA-DQB2-229ENST00000411527 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
HLA-DQB2-229ENST00000411527 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
HLA-DQB2-229ENST00000411527 UBAP1LF5GYI3 381 aa22.78■■□□□ 1.24
HLA-DQB2-229ENST00000411527 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms