RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NUP153P49790 1475 aaKnown RBP23.23■■□□□ 1.31
LIMS2-208ENST00000410011 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
LIMS2-208ENST00000410011 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 BCANQ96GW7 911 aa23.19■■□□□ 1.3
LIMS2-208ENST00000410011 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-208ENST00000410011 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
LIMS2-208ENST00000410011 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
LIMS2-208ENST00000410011 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
LIMS2-208ENST00000410011 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.29
LIMS2-208ENST00000410011 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-208ENST00000410011 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
LIMS2-208ENST00000410011 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
LIMS2-208ENST00000410011 ADGRL2O95490 1459 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 NBPF8Q3BBV2 869 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.29
LIMS2-208ENST00000410011 FOXD1Q16676 465 aa23.08■■□□□ 1.29
LIMS2-208ENST00000410011 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
LIMS2-208ENST00000410011 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-208ENST00000410011 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
LIMS2-208ENST00000410011 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-208ENST00000410011 PZPP20742 1482 aa23.07■■□□□ 1.28
LIMS2-208ENST00000410011 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
LIMS2-208ENST00000410011 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
LIMS2-208ENST00000410011 ADGBQ8N7X0 1667 aa23.05■■□□□ 1.28
LIMS2-208ENST00000410011 GPATCH8Q9UKJ3 1502 aaKnown RBP23.05■■□□□ 1.28
LIMS2-208ENST00000410011 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
LIMS2-208ENST00000410011 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-208ENST00000410011 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-208ENST00000410011 MBD5Q9P267 1494 aa23.02■■□□□ 1.28
LIMS2-208ENST00000410011 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
LIMS2-208ENST00000410011 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
LIMS2-208ENST00000410011 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
LIMS2-208ENST00000410011 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
LIMS2-208ENST00000410011 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
LIMS2-208ENST00000410011 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
LIMS2-208ENST00000410011 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 PLB1Q6P1J6 1458 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 NUP160Q12769 1436 aa22.95■■□□□ 1.26
LIMS2-208ENST00000410011 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
LIMS2-208ENST00000410011 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
LIMS2-208ENST00000410011 KIF14Q15058 1648 aa22.92■■□□□ 1.26
LIMS2-208ENST00000410011 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
LIMS2-208ENST00000410011 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
LIMS2-208ENST00000410011 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.26
LIMS2-208ENST00000410011 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
LIMS2-208ENST00000410011 ABCA8O94911 1581 aa22.88■■□□□ 1.25
LIMS2-208ENST00000410011 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
LIMS2-208ENST00000410011 PKD2Q13563 968 aa22.86■■□□□ 1.25
LIMS2-208ENST00000410011 USP47Q96K76 1375 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
LIMS2-208ENST00000410011 KDM5CP41229 1560 aa22.84■■□□□ 1.25
LIMS2-208ENST00000410011 CDC42BPAQ5VT25 1732 aa22.83■■□□□ 1.24
LIMS2-208ENST00000410011 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.24
LIMS2-208ENST00000410011 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
LIMS2-208ENST00000410011 ZNF777Q9ULD5 760 aaPredicted RBP22.81■■□□□ 1.24
LIMS2-208ENST00000410011 ATP10BO94823 1461 aa22.81■■□□□ 1.24
LIMS2-208ENST00000410011 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
LIMS2-208ENST00000410011 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 PTPRGP23470 1445 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
LIMS2-208ENST00000410011 NUP155O75694 1391 aa22.77■■□□□ 1.23
LIMS2-208ENST00000410011 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
LIMS2-208ENST00000410011 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-208ENST00000410011 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
LIMS2-208ENST00000410011 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
LIMS2-208ENST00000410011 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
LIMS2-208ENST00000410011 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
LIMS2-208ENST00000410011 FBLN2P98095 1184 aa22.7■■□□□ 1.22
LIMS2-208ENST00000410011 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
LIMS2-208ENST00000410011 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
LIMS2-208ENST00000410011 CARD11Q9BXL7 1154 aa22.66■■□□□ 1.22
LIMS2-208ENST00000410011 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
LIMS2-208ENST00000410011 NUDCQ9Y266 331 aa22.65■■□□□ 1.22
LIMS2-208ENST00000410011 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
LIMS2-208ENST00000410011 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.21
LIMS2-208ENST00000410011 MSH5O43196 834 aa22.62■■□□□ 1.21
LIMS2-208ENST00000410011 PREX2Q70Z35 1606 aa22.61■■□□□ 1.21
LIMS2-208ENST00000410011 RALBP1Q15311 655 aa22.6■■□□□ 1.21
LIMS2-208ENST00000410011 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-208ENST00000410011 LRPPRCP42704 1394 aaKnown RBP22.6■■□□□ 1.21
LIMS2-208ENST00000410011 FAM135AQ9P2D6 1515 aa22.59■■□□□ 1.21
LIMS2-208ENST00000410011 HNRNPMP52272 730 aaKnown RBP eCLIP22.59■■□□□ 1.21
LIMS2-208ENST00000410011 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms