RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
CCDC148-203ENST00000409889 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
CCDC148-203ENST00000409889 MLECQ14165 292 aa18.23■□□□□ 0.51
CCDC148-203ENST00000409889 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
CCDC148-203ENST00000409889 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
CCDC148-203ENST00000409889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC148-203ENST00000409889 ARHGEF12Q9NZN5 1544 aa18.19■□□□□ 0.5
CCDC148-203ENST00000409889 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
CCDC148-203ENST00000409889 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
CCDC148-203ENST00000409889 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
CCDC148-203ENST00000409889 UHRF1BP1Q6BDS2 1440 aa18.12■□□□□ 0.49
CCDC148-203ENST00000409889 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
CCDC148-203ENST00000409889 ATP10AO60312 1499 aa18.11■□□□□ 0.49
CCDC148-203ENST00000409889 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
CCDC148-203ENST00000409889 SCAPERQ9BY12 1400 aa18.09■□□□□ 0.49
CCDC148-203ENST00000409889 PTPRTO14522 1441 aa18.07■□□□□ 0.48
CCDC148-203ENST00000409889 LTBP4Q8N2S1 1624 aa18.07■□□□□ 0.48
CCDC148-203ENST00000409889 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
CCDC148-203ENST00000409889 C3P01024 1663 aa18.06■□□□□ 0.48
CCDC148-203ENST00000409889 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
CCDC148-203ENST00000409889 PLCH2O75038 1416 aa18.04■□□□□ 0.48
CCDC148-203ENST00000409889 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
CCDC148-203ENST00000409889 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
CCDC148-203ENST00000409889 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
CCDC148-203ENST00000409889 KDM5CP41229 1560 aa17.99■□□□□ 0.47
CCDC148-203ENST00000409889 DIP2CQ9Y2E4 1556 aa17.99■□□□□ 0.47
CCDC148-203ENST00000409889 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
CCDC148-203ENST00000409889 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
CCDC148-203ENST00000409889 ABCA6Q8N139 1617 aa17.95■□□□□ 0.46
CCDC148-203ENST00000409889 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
CCDC148-203ENST00000409889 KIF14Q15058 1648 aa17.94■□□□□ 0.46
CCDC148-203ENST00000409889 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
CCDC148-203ENST00000409889 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
CCDC148-203ENST00000409889 ARHGAP5Q13017 1502 aa17.92■□□□□ 0.46
CCDC148-203ENST00000409889 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
CCDC148-203ENST00000409889 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
CCDC148-203ENST00000409889 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
CCDC148-203ENST00000409889 AGLP35573 1532 aa17.89■□□□□ 0.45
CCDC148-203ENST00000409889 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
CCDC148-203ENST00000409889 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
CCDC148-203ENST00000409889 MLH3Q9UHC1 1453 aa17.86■□□□□ 0.45
CCDC148-203ENST00000409889 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
CCDC148-203ENST00000409889 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
CCDC148-203ENST00000409889 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
CCDC148-203ENST00000409889 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
CCDC148-203ENST00000409889 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
CCDC148-203ENST00000409889 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.45
CCDC148-203ENST00000409889 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
CCDC148-203ENST00000409889 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
CCDC148-203ENST00000409889 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
CCDC148-203ENST00000409889 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
CCDC148-203ENST00000409889 ATP1B4Q9UN42 357 aaPredicted RBP17.81■□□□□ 0.44
CCDC148-203ENST00000409889 ABCC1P33527 1531 aa17.81■□□□□ 0.44
CCDC148-203ENST00000409889 NPATQ14207 1427 aa17.81■□□□□ 0.44
CCDC148-203ENST00000409889 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
CCDC148-203ENST00000409889 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
CCDC148-203ENST00000409889 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
CCDC148-203ENST00000409889 EEA1Q15075 1411 aa17.8■□□□□ 0.44
CCDC148-203ENST00000409889 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CCDC148-203ENST00000409889 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
CCDC148-203ENST00000409889 CLIP1P30622 1438 aa17.79■□□□□ 0.44
CCDC148-203ENST00000409889 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
CCDC148-203ENST00000409889 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
CCDC148-203ENST00000409889 CEP170BQ9Y4F5 1589 aaPredicted RBP17.76■□□□□ 0.43
CCDC148-203ENST00000409889 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CCDC148-203ENST00000409889 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
CCDC148-203ENST00000409889 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
CCDC148-203ENST00000409889 HSPA1LP34931 641 aa17.72■□□□□ 0.43
CCDC148-203ENST00000409889 PKD2Q13563 968 aa17.72■□□□□ 0.43
CCDC148-203ENST00000409889 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
CCDC148-203ENST00000409889 CDC42BPAQ5VT25 1732 aa17.71■□□□□ 0.43
CCDC148-203ENST00000409889 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
CCDC148-203ENST00000409889 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
CCDC148-203ENST00000409889 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
CCDC148-203ENST00000409889 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
CCDC148-203ENST00000409889 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
CCDC148-203ENST00000409889 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
CCDC148-203ENST00000409889 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
CCDC148-203ENST00000409889 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
CCDC148-203ENST00000409889 CPS1P31327 1500 aa17.65■□□□□ 0.42
CCDC148-203ENST00000409889 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
CCDC148-203ENST00000409889 DNMT1P26358 1616 aaKnown RBP17.64■□□□□ 0.41
CCDC148-203ENST00000409889 ATP7AQ04656 1500 aa17.63■□□□□ 0.41
CCDC148-203ENST00000409889 TOM1O60784 492 aa17.63■□□□□ 0.41
CCDC148-203ENST00000409889 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
CCDC148-203ENST00000409889 INO80Q9ULG1 1556 aaPredicted RBP17.62■□□□□ 0.41
CCDC148-203ENST00000409889 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
CCDC148-203ENST00000409889 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
CCDC148-203ENST00000409889 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
CCDC148-203ENST00000409889 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
CCDC148-203ENST00000409889 A2MP01023 1474 aa17.58■□□□□ 0.41
CCDC148-203ENST00000409889 MSH5O43196 834 aa17.58■□□□□ 0.4
CCDC148-203ENST00000409889 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
CCDC148-203ENST00000409889 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
CCDC148-203ENST00000409889 ALKQ9UM73 1620 aa17.58■□□□□ 0.4
CCDC148-203ENST00000409889 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
CCDC148-203ENST00000409889 ADGBQ8N7X0 1667 aa17.56■□□□□ 0.4
CCDC148-203ENST00000409889 GGT6Q6P531 493 aa17.55■□□□□ 0.4
CCDC148-203ENST00000409889 VWDEQ8N2E2 1590 aa17.54■□□□□ 0.4
CCDC148-203ENST00000409889 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms