RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
ITGA6-203ENST00000409532 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
ITGA6-203ENST00000409532 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
ITGA6-203ENST00000409532 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
ITGA6-203ENST00000409532 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
ITGA6-203ENST00000409532 MIA2Q96PC5 1412 aa15.55■□□□□ 0.08
ITGA6-203ENST00000409532 WDR62O43379 1518 aa15.55■□□□□ 0.08
ITGA6-203ENST00000409532 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
ITGA6-203ENST00000409532 DAPK1P53355 1430 aa15.54■□□□□ 0.08
ITGA6-203ENST00000409532 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
ITGA6-203ENST00000409532 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
ITGA6-203ENST00000409532 ABCC5O15440 1437 aa15.53■□□□□ 0.08
ITGA6-203ENST00000409532 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
ITGA6-203ENST00000409532 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
ITGA6-203ENST00000409532 PRG4Q92954 1404 aaPredicted RBP15.52■□□□□ 0.07
ITGA6-203ENST00000409532 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.07
ITGA6-203ENST00000409532 CCDC7Q96M83 1385 aa15.52■□□□□ 0.07
ITGA6-203ENST00000409532 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
ITGA6-203ENST00000409532 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
ITGA6-203ENST00000409532 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
ITGA6-203ENST00000409532 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
ITGA6-203ENST00000409532 KIF7Q2M1P5 1343 aa15.49■□□□□ 0.07
ITGA6-203ENST00000409532 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
ITGA6-203ENST00000409532 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
ITGA6-203ENST00000409532 PKD2Q13563 968 aa15.47■□□□□ 0.07
ITGA6-203ENST00000409532 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
ITGA6-203ENST00000409532 RPRD2Q5VT52 1461 aaKnown RBP15.46■□□□□ 0.07
ITGA6-203ENST00000409532 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
ITGA6-203ENST00000409532 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
ITGA6-203ENST00000409532 KIAA0556O60303 1618 aa15.44■□□□□ 0.06
ITGA6-203ENST00000409532 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
ITGA6-203ENST00000409532 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
ITGA6-203ENST00000409532 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
ITGA6-203ENST00000409532 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
ITGA6-203ENST00000409532 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
ITGA6-203ENST00000409532 TEX14Q8IWB6 1497 aa15.42■□□□□ 0.06
ITGA6-203ENST00000409532 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
ITGA6-203ENST00000409532 RAPGEF6Q8TEU7 1601 aa15.41■□□□□ 0.06
ITGA6-203ENST00000409532 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
ITGA6-203ENST00000409532 CAMSAP2Q08AD1 1489 aa15.4■□□□□ 0.06
ITGA6-203ENST00000409532 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
ITGA6-203ENST00000409532 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
ITGA6-203ENST00000409532 PZPP20742 1482 aa15.38■□□□□ 0.05
ITGA6-203ENST00000409532 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
ITGA6-203ENST00000409532 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
ITGA6-203ENST00000409532 USP47Q96K76 1375 aa15.36■□□□□ 0.05
ITGA6-203ENST00000409532 KIF14Q15058 1648 aa15.36■□□□□ 0.05
ITGA6-203ENST00000409532 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
ITGA6-203ENST00000409532 HNRNPMP52272 730 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■■■■□ 22.9
ITGA6-203ENST00000409532 NUP155O75694 1391 aa15.36■□□□□ 0.05
ITGA6-203ENST00000409532 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
ITGA6-203ENST00000409532 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
ITGA6-203ENST00000409532 MSH5O43196 834 aa15.34■□□□□ 0.05
ITGA6-203ENST00000409532 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
ITGA6-203ENST00000409532 ZBED9Q6R2W3 1325 aa15.34■□□□□ 0.05
ITGA6-203ENST00000409532 ANKRD30AQ9BXX3 1397 aa15.34■□□□□ 0.05
ITGA6-203ENST00000409532 TSPY4P0CV99 314 aa15.33■□□□□ 0.04
ITGA6-203ENST00000409532 TSPY10P0CW01 314 aa15.33■□□□□ 0.04
ITGA6-203ENST00000409532 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
ITGA6-203ENST00000409532 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
ITGA6-203ENST00000409532 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
ITGA6-203ENST00000409532 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
ITGA6-203ENST00000409532 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
ITGA6-203ENST00000409532 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
ITGA6-203ENST00000409532 RGL3Q3MIN7 710 aa15.3■□□□□ 0.04
ITGA6-203ENST00000409532 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
ITGA6-203ENST00000409532 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
ITGA6-203ENST00000409532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.046e-8■■□□□ 12
ITGA6-203ENST00000409532 DHX29Q7Z478 1369 aaKnown RBP15.28■□□□□ 0.04
ITGA6-203ENST00000409532 BCORL1Q5H9F3 1711 aa15.27■□□□□ 0.03
ITGA6-203ENST00000409532 ERICH6Q7L0X2 663 aa15.27■□□□□ 0.03
ITGA6-203ENST00000409532 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
ITGA6-203ENST00000409532 C9orf84Q5VXU9 1444 aa15.25■□□□□ 0.03
ITGA6-203ENST00000409532 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
ITGA6-203ENST00000409532 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
ITGA6-203ENST00000409532 KIF15Q9NS87 1388 aa15.23■□□□□ 0.03
ITGA6-203ENST00000409532 ATP10BO94823 1461 aa15.23■□□□□ 0.03
ITGA6-203ENST00000409532 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
ITGA6-203ENST00000409532 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
ITGA6-203ENST00000409532 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
ITGA6-203ENST00000409532 NUDCQ9Y266 331 aa15.21■□□□□ 0.03
ITGA6-203ENST00000409532 ADGRL2O95490 1459 aa15.21■□□□□ 0.03
ITGA6-203ENST00000409532 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.02
ITGA6-203ENST00000409532 CCDC136Q96JN2 1154 aa15.2■□□□□ 0.02
ITGA6-203ENST00000409532 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
ITGA6-203ENST00000409532 NBPF1Q3BBV0 1214 aa15.19■□□□□ 0.02
ITGA6-203ENST00000409532 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
ITGA6-203ENST00000409532 FANCIQ9NVI1 1328 aa15.18■□□□□ 0.02
ITGA6-203ENST00000409532 KDM5CP41229 1560 aa15.18■□□□□ 0.02
ITGA6-203ENST00000409532 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
ITGA6-203ENST00000409532 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
ITGA6-203ENST00000409532 NUP160Q12769 1436 aa15.17■□□□□ 0.02
ITGA6-203ENST00000409532 PTPRGP23470 1445 aa15.16■□□□□ 0.02
ITGA6-203ENST00000409532 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
ITGA6-203ENST00000409532 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
ITGA6-203ENST00000409532 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
ITGA6-203ENST00000409532 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
ITGA6-203ENST00000409532 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
ITGA6-203ENST00000409532 ARID4BQ4LE39 1312 aaPredicted RBP15.12■□□□□ 0.01
ITGA6-203ENST00000409532 ABCA8O94911 1581 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms