RNA–Protein interactions for RNA: ENST00000409298.5

GTDC1-207, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-207ENST00000409298 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
GTDC1-207ENST00000409298 ZHX1Q9UKY1 873 aaPredicted RBP7.97□□□□□ -1.13
GTDC1-207ENST00000409298 PEG3Q9GZU2 1588 aa7.96□□□□□ -1.14
GTDC1-207ENST00000409298 ANP32CO43423 234 aa7.96□□□□□ -1.14
GTDC1-207ENST00000409298 L1TD1Q5T7N2 865 aaKnown RBP7.95□□□□□ -1.14
GTDC1-207ENST00000409298 PLCD3Q8N3E9 789 aa7.95□□□□□ -1.14
GTDC1-207ENST00000409298 VGFO15240 615 aaPredicted RBP7.95□□□□□ -1.14
GTDC1-207ENST00000409298 MAP7D2Q96T17 732 aa7.94□□□□□ -1.14
GTDC1-207ENST00000409298 CECR2Q9BXF3 1484 aa7.94□□□□□ -1.14
GTDC1-207ENST00000409298 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
GTDC1-207ENST00000409298 DMTNQ08495 405 aa7.94□□□□□ -1.14
GTDC1-207ENST00000409298 PPP4R3BQ5MIZ7 849 aa7.94□□□□□ -1.14
GTDC1-207ENST00000409298 VGLL3A8MV65 326 aa7.92□□□□□ -1.14
GTDC1-207ENST00000409298 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
GTDC1-207ENST00000409298 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
GTDC1-207ENST00000409298 BACH2Q9BYV9 841 aa7.92□□□□□ -1.14
GTDC1-207ENST00000409298 PDE4AP27815 886 aa7.91□□□□□ -1.14
GTDC1-207ENST00000409298 RGS22Q8NE09 1264 aa7.91□□□□□ -1.14
GTDC1-207ENST00000409298 TCERG1O14776 1098 aaKnown RBP7.91□□□□□ -1.14
GTDC1-207ENST00000409298 ABCB7O75027 752 aa7.91□□□□□ -1.14
GTDC1-207ENST00000409298 SIN3AQ96ST3 1273 aa7.9□□□□□ -1.14
GTDC1-207ENST00000409298 CUX2O14529 1486 aa7.9□□□□□ -1.15
GTDC1-207ENST00000409298 RIPK4P57078 832 aa7.89□□□□□ -1.15
GTDC1-207ENST00000409298 RNF123Q5XPI4 1314 aa7.89□□□□□ -1.15
GTDC1-207ENST00000409298 TNIKQ9UKE5 1360 aa7.89□□□□□ -1.15
GTDC1-207ENST00000409298 MS4A1P11836 297 aa7.88□□□□□ -1.15
GTDC1-207ENST00000409298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.88□□□□□ -1.15
GTDC1-207ENST00000409298 POGKQ9P215 609 aa7.88□□□□□ -1.15
GTDC1-207ENST00000409298 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
GTDC1-207ENST00000409298 ZSCAN20P17040 1043 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-207ENST00000409298 KCNG1Q9UIX4 513 aa7.88□□□□□ -1.15
GTDC1-207ENST00000409298 ATF5Q9Y2D1 282 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-207ENST00000409298 UNC13AQ9UPW8 1703 aa7.88□□□□□ -1.15
GTDC1-207ENST00000409298 KIF20AO95235 890 aa7.87□□□□□ -1.15
GTDC1-207ENST00000409298 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
GTDC1-207ENST00000409298 BICRAQ9NZM4 1560 aa7.87□□□□□ -1.15
GTDC1-207ENST00000409298 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
GTDC1-207ENST00000409298 ESPNB1AK53 854 aa7.87□□□□□ -1.15
GTDC1-207ENST00000409298 HSP90B1P14625 803 aaKnown RBP7.87□□□□□ -1.15
GTDC1-207ENST00000409298 TERF1P54274 439 aa7.87□□□□□ -1.15
GTDC1-207ENST00000409298 CC2D2AQ9P2K1 1620 aa7.86□□□□□ -1.15
GTDC1-207ENST00000409298 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
GTDC1-207ENST00000409298 CNPY4Q8N129 248 aa7.86□□□□□ -1.15
GTDC1-207ENST00000409298 ANP32BQ92688 251 aaKnown RBP7.86□□□□□ -1.15
GTDC1-207ENST00000409298 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
GTDC1-207ENST00000409298 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
GTDC1-207ENST00000409298 WDR97A6NE52 1622 aa7.85□□□□□ -1.15
GTDC1-207ENST00000409298 ZBED9Q6R2W3 1325 aa7.85□□□□□ -1.15
GTDC1-207ENST00000409298 KIAA1211Q6ZU35 1233 aa7.85□□□□□ -1.15
GTDC1-207ENST00000409298 MMP14P50281 582 aa7.84□□□□□ -1.15
GTDC1-207ENST00000409298 MTERF4Q7Z6M4 381 aaKnown RBP7.84□□□□□ -1.15
GTDC1-207ENST00000409298 C14orf37Q86TY3 774 aa7.84□□□□□ -1.15
GTDC1-207ENST00000409298 SMARCA2P51531 1590 aa7.84□□□□□ -1.16
GTDC1-207ENST00000409298 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
GTDC1-207ENST00000409298 POLA2Q14181 598 aa7.83□□□□□ -1.16
GTDC1-207ENST00000409298 PANK2Q9BZ23 570 aa7.83□□□□□ -1.16
GTDC1-207ENST00000409298 GTPBP4Q9BZE4 634 aaKnown RBP7.83□□□□□ -1.16
GTDC1-207ENST00000409298 SMG6Q86US8 1419 aaKnown RBP7.83□□□□□ -1.16
GTDC1-207ENST00000409298 LETM1O95202 739 aaPredicted RBP7.82□□□□□ -1.16
GTDC1-207ENST00000409298 TNNT2P45379 298 aaPredicted RBP7.82□□□□□ -1.16
GTDC1-207ENST00000409298 TAF3Q5VWG9 929 aa7.82□□□□□ -1.16
GTDC1-207ENST00000409298 AKNAQ7Z591 1439 aa7.82□□□□□ -1.16
GTDC1-207ENST00000409298 MAPKBP1O60336 1514 aa7.82□□□□□ -1.16
GTDC1-207ENST00000409298 GOLGA6L3A6NEY3 463 aa7.81□□□□□ -1.16
GTDC1-207ENST00000409298 SLC20A2Q08357 652 aa7.81□□□□□ -1.16
GTDC1-207ENST00000409298 FAM13BQ9NYF5 915 aa7.8□□□□□ -1.16
GTDC1-207ENST00000409298 SLC52A1Q9NWF4 448 aa7.8□□□□□ -1.16
GTDC1-207ENST00000409298 OFD1O75665 1012 aa7.79□□□□□ -1.16
GTDC1-207ENST00000409298 PSEN1P49768 467 aa7.79□□□□□ -1.16
GTDC1-207ENST00000409298 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
GTDC1-207ENST00000409298 CDK11BP21127 795 aaKnown RBP7.79□□□□□ -1.16
GTDC1-207ENST00000409298 CCDC94Q9BW85 323 aaPredicted RBP7.79□□□□□ -1.16
GTDC1-207ENST00000409298 DNTTIP2Q5QJE6 756 aaKnown RBP7.78□□□□□ -1.16
GTDC1-207ENST00000409298 CLGNO14967 610 aa7.78□□□□□ -1.16
GTDC1-207ENST00000409298 MRE11P49959 708 aa7.77□□□□□ -1.17
GTDC1-207ENST00000409298 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
GTDC1-207ENST00000409298 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
GTDC1-207ENST00000409298 HDAC5Q9UQL6 1122 aa7.76□□□□□ -1.17
GTDC1-207ENST00000409298 MYH16Q9H6N6 1097 aa7.75□□□□□ -1.17
GTDC1-207ENST00000409298 RSF1Q96T23 1441 aaPredicted RBP7.75□□□□□ -1.17
GTDC1-207ENST00000409298 E9PSI1 815 aa7.75□□□□□ -1.17
GTDC1-207ENST00000409298 SOX12O15370 315 aa7.75□□□□□ -1.17
GTDC1-207ENST00000409298 IRX5P78411 483 aaPredicted RBP7.75□□□□□ -1.17
GTDC1-207ENST00000409298 GRIPAP1Q4V328 841 aa7.75□□□□□ -1.17
GTDC1-207ENST00000409298 NUDCQ9Y266 331 aa7.75□□□□□ -1.17
GTDC1-207ENST00000409298 DYNC1I1O14576 645 aa7.74□□□□□ -1.17
GTDC1-207ENST00000409298 EIF4G1Q04637 1599 aaKnown RBP7.74□□□□□ -1.17
GTDC1-207ENST00000409298 FAM193AP78312 1265 aa7.74□□□□□ -1.17
GTDC1-207ENST00000409298 ZNF622Q969S3 477 aaKnown RBP eCLIP7.74□□□□□ -1.177e-6■■□□□ 12.8
GTDC1-207ENST00000409298 PHLDB1Q86UU1 1377 aa7.73□□□□□ -1.17
GTDC1-207ENST00000409298 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
GTDC1-207ENST00000409298 ZBTB12Q9Y330 459 aaPredicted RBP7.73□□□□□ -1.17
GTDC1-207ENST00000409298 CCDC184Q52MB2 194 aa7.72□□□□□ -1.17
GTDC1-207ENST00000409298 AXDND1Q5T1B0 1012 aaPredicted RBP7.72□□□□□ -1.17
GTDC1-207ENST00000409298 TMC1Q8TDI8 760 aa7.72□□□□□ -1.17
GTDC1-207ENST00000409298 TRIM44Q96DX7 344 aaPredicted RBP7.72□□□□□ -1.17
GTDC1-207ENST00000409298 DNAJC2Q99543 621 aaKnown RBP7.72□□□□□ -1.17
GTDC1-207ENST00000409298 CEP164Q9UPV0 1460 aa7.72□□□□□ -1.17
GTDC1-207ENST00000409298 VPS8Q8N3P4 1428 aa7.72□□□□□ -1.17
GTDC1-207ENST00000409298 CERS3Q8IU89 383 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms