RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 ZNF644Q9H582 1327 aaPredicted RBP28.11■■■□□ 2.09
LIMS2-204ENST00000409286 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
LIMS2-204ENST00000409286 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
LIMS2-204ENST00000409286 SIN3AQ96ST3 1273 aa28.08■■■□□ 2.09
LIMS2-204ENST00000409286 ERCC6L2Q5T890 1561 aa28.04■■■□□ 2.08
LIMS2-204ENST00000409286 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
LIMS2-204ENST00000409286 ABCC2Q92887 1545 aa28.01■■■□□ 2.08
LIMS2-204ENST00000409286 CDC42BPAQ5VT25 1732 aa27.98■■■□□ 2.07
LIMS2-204ENST00000409286 KDM6BO15054 1643 aa27.97■■■□□ 2.07
LIMS2-204ENST00000409286 ZNF777Q9ULD5 760 aaPredicted RBP27.97■■■□□ 2.07
LIMS2-204ENST00000409286 UHRF1BP1LA0JNW5 1464 aa27.95■■■□□ 2.07
LIMS2-204ENST00000409286 TRIM52Q96A61 297 aa27.95■■■□□ 2.07
LIMS2-204ENST00000409286 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
LIMS2-204ENST00000409286 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
LIMS2-204ENST00000409286 PPP1R15AO75807 674 aaPredicted RBP27.91■■■□□ 2.06
LIMS2-204ENST00000409286 ADGBQ8N7X0 1667 aa27.9■■■□□ 2.06
LIMS2-204ENST00000409286 CROCC2H7BZ55 1655 aa27.89■■■□□ 2.06
LIMS2-204ENST00000409286 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
LIMS2-204ENST00000409286 SHANK2Q9UPX8 1470 aa27.88■■■□□ 2.05
LIMS2-204ENST00000409286 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
LIMS2-204ENST00000409286 ANKRD30AQ9BXX3 1397 aa27.87■■■□□ 2.05
LIMS2-204ENST00000409286 DENND4BO75064 1496 aaPredicted RBP27.87■■■□□ 2.05
LIMS2-204ENST00000409286 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
LIMS2-204ENST00000409286 ARHGEF5Q12774 1597 aa27.83■■■□□ 2.05
LIMS2-204ENST00000409286 PREX2Q70Z35 1606 aa27.83■■■□□ 2.04
LIMS2-204ENST00000409286 RSPH4AQ5TD94 716 aa27.82■■■□□ 2.04
LIMS2-204ENST00000409286 TSPY4P0CV99 314 aa27.8■■■□□ 2.04
LIMS2-204ENST00000409286 TSPY10P0CW01 314 aa27.8■■■□□ 2.04
LIMS2-204ENST00000409286 C9orf84Q5VXU9 1444 aa27.79■■■□□ 2.04
LIMS2-204ENST00000409286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.79■■■□□ 2.04
LIMS2-204ENST00000409286 CDC42BPBQ9Y5S2 1711 aa27.78■■■□□ 2.04
LIMS2-204ENST00000409286 MBD5Q9P267 1494 aa27.78■■■□□ 2.04
LIMS2-204ENST00000409286 OSCARQ8IYS5 282 aa27.78■■■□□ 2.04
LIMS2-204ENST00000409286 ZCCHC11Q5TAX3 1644 aaKnown RBP27.77■■■□□ 2.04
LIMS2-204ENST00000409286 TTC37Q6PGP7 1564 aa27.75■■■□□ 2.03
LIMS2-204ENST00000409286 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
LIMS2-204ENST00000409286 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
LIMS2-204ENST00000409286 CCDC141Q6ZP82 1450 aa27.73■■■□□ 2.03
LIMS2-204ENST00000409286 ANKRD50Q9ULJ7 1429 aa27.73■■■□□ 2.03
LIMS2-204ENST00000409286 MIER1Q8N108 512 aa27.72■■■□□ 2.03
LIMS2-204ENST00000409286 SLC4A1APQ9BWU0 796 aaKnown RBP27.72■■■□□ 2.03
LIMS2-204ENST00000409286 ANKRD30BQ9BXX2 1392 aa27.71■■■□□ 2.03
LIMS2-204ENST00000409286 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.03
LIMS2-204ENST00000409286 ARHGAP5Q13017 1502 aa27.7■■■□□ 2.02
LIMS2-204ENST00000409286 PZPP20742 1482 aa27.69■■■□□ 2.02
LIMS2-204ENST00000409286 KIAA1107Q9UPP5 1409 aa27.69■■■□□ 2.02
LIMS2-204ENST00000409286 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
LIMS2-204ENST00000409286 MYO5CQ9NQX4 1742 aa27.68■■■□□ 2.02
LIMS2-204ENST00000409286 PLCH2O75038 1416 aa27.67■■■□□ 2.02
LIMS2-204ENST00000409286 KIF15Q9NS87 1388 aa27.63■■■□□ 2.01
LIMS2-204ENST00000409286 FOXD1Q16676 465 aa27.63■■■□□ 2.01
LIMS2-204ENST00000409286 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
LIMS2-204ENST00000409286 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
LIMS2-204ENST00000409286 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
LIMS2-204ENST00000409286 SYCP2Q9BX26 1530 aa27.61■■■□□ 2.01
LIMS2-204ENST00000409286 KDM5DQ9BY66 1539 aa27.58■■■□□ 2
LIMS2-204ENST00000409286 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
LIMS2-204ENST00000409286 WDR7Q9Y4E6 1490 aa27.55■■■□□ 2
LIMS2-204ENST00000409286 NUP155O75694 1391 aa27.54■■■□□ 2
LIMS2-204ENST00000409286 L3MBTL2Q969R5 705 aa27.54■■■□□ 2
LIMS2-204ENST00000409286 PKD2Q13563 968 aa27.52■■■□□ 2
LIMS2-204ENST00000409286 CENPBP07199 599 aaPredicted RBP27.51■■□□□ 1.99
LIMS2-204ENST00000409286 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
LIMS2-204ENST00000409286 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
LIMS2-204ENST00000409286 ABCC1P33527 1531 aa27.47■■□□□ 1.99
LIMS2-204ENST00000409286 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
LIMS2-204ENST00000409286 ABCA9Q8IUA7 1624 aa27.41■■□□□ 1.98
LIMS2-204ENST00000409286 ASXL2Q76L83 1435 aa27.41■■□□□ 1.98
LIMS2-204ENST00000409286 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
LIMS2-204ENST00000409286 NPM1P06748 294 aaKnown RBP eCLIP27.4■■□□□ 1.98
LIMS2-204ENST00000409286 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
LIMS2-204ENST00000409286 TRAPPC8Q9Y2L5 1435 aa27.38■■□□□ 1.97
LIMS2-204ENST00000409286 DDX10Q13206 875 aaKnown RBP27.37■■□□□ 1.97
LIMS2-204ENST00000409286 RTEL1-TNFRSF6BF6WH68 1400 aa27.37■■□□□ 1.97
LIMS2-204ENST00000409286 UNC13BO14795 1591 aa27.37■■□□□ 1.97
LIMS2-204ENST00000409286 ERBINQ96RT1 1412 aa27.37■■□□□ 1.97
LIMS2-204ENST00000409286 FAM135AQ9P2D6 1515 aa27.36■■□□□ 1.97
LIMS2-204ENST00000409286 EIF4G2P78344 907 aaKnown RBP eCLIP27.34■■□□□ 1.97
LIMS2-204ENST00000409286 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.97
LIMS2-204ENST00000409286 FANCAO15360 1455 aa27.33■■□□□ 1.96
LIMS2-204ENST00000409286 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
LIMS2-204ENST00000409286 HSPA5P11021 654 aaKnown RBP27.32■■□□□ 1.96
LIMS2-204ENST00000409286 YTHDC1Q96MU7 727 aaKnown RBP27.28■■□□□ 1.96
LIMS2-204ENST00000409286 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
LIMS2-204ENST00000409286 AFAP1Q8N556 730 aa27.26■■□□□ 1.95
LIMS2-204ENST00000409286 IQGAP3Q86VI3 1631 aa27.26■■□□□ 1.95
LIMS2-204ENST00000409286 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
LIMS2-204ENST00000409286 UHRF1BP1Q6BDS2 1440 aa27.22■■□□□ 1.95
LIMS2-204ENST00000409286 ADGRL1O94910 1474 aa27.22■■□□□ 1.95
LIMS2-204ENST00000409286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
LIMS2-204ENST00000409286 SCAPERQ9BY12 1400 aa27.22■■□□□ 1.95
LIMS2-204ENST00000409286 CFAP74Q9C0B2 1584 aa27.19■■□□□ 1.94
LIMS2-204ENST00000409286 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
LIMS2-204ENST00000409286 INO80Q9ULG1 1556 aaPredicted RBP27.17■■□□□ 1.94
LIMS2-204ENST00000409286 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
LIMS2-204ENST00000409286 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
LIMS2-204ENST00000409286 SCAF1Q9H7N4 1312 aaKnown RBP27.15■■□□□ 1.94
LIMS2-204ENST00000409286 ATP10AO60312 1499 aa27.15■■□□□ 1.94
LIMS2-204ENST00000409286 WASHC2AQ641Q2 1341 aa27.15■■□□□ 1.94
LIMS2-204ENST00000409286 PLA2R1Q13018 1463 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms