RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
ATG9A-203ENST00000409033 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
ATG9A-203ENST00000409033 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
ATG9A-203ENST00000409033 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
ATG9A-203ENST00000409033 NUP155O75694 1391 aa17.39■□□□□ 0.37
ATG9A-203ENST00000409033 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
ATG9A-203ENST00000409033 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
ATG9A-203ENST00000409033 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
ATG9A-203ENST00000409033 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
ATG9A-203ENST00000409033 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
ATG9A-203ENST00000409033 FKBP8Q14318 412 aa17.36■□□□□ 0.37
ATG9A-203ENST00000409033 DCAF11Q8TEB1 546 aa17.35■□□□□ 0.37
ATG9A-203ENST00000409033 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
ATG9A-203ENST00000409033 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
ATG9A-203ENST00000409033 WDR62O43379 1518 aa17.33■□□□□ 0.36
ATG9A-203ENST00000409033 ANKRD30AQ9BXX3 1397 aa17.33■□□□□ 0.36
ATG9A-203ENST00000409033 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.36
ATG9A-203ENST00000409033 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
ATG9A-203ENST00000409033 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
ATG9A-203ENST00000409033 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
ATG9A-203ENST00000409033 NPM1P06748 294 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATG9A-203ENST00000409033 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
ATG9A-203ENST00000409033 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
ATG9A-203ENST00000409033 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
ATG9A-203ENST00000409033 DISP1Q96F81 1524 aa17.3■□□□□ 0.36
ATG9A-203ENST00000409033 DAPK1P53355 1430 aa17.29■□□□□ 0.36
ATG9A-203ENST00000409033 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
ATG9A-203ENST00000409033 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
ATG9A-203ENST00000409033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.36
ATG9A-203ENST00000409033 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
ATG9A-203ENST00000409033 ABCC5O15440 1437 aa17.26■□□□□ 0.35
ATG9A-203ENST00000409033 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
ATG9A-203ENST00000409033 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
ATG9A-203ENST00000409033 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
ATG9A-203ENST00000409033 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
ATG9A-203ENST00000409033 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
ATG9A-203ENST00000409033 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
ATG9A-203ENST00000409033 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
ATG9A-203ENST00000409033 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
ATG9A-203ENST00000409033 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
ATG9A-203ENST00000409033 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
ATG9A-203ENST00000409033 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
ATG9A-203ENST00000409033 LRRIQ1Q96JM4 1722 aa17.17■□□□□ 0.34
ATG9A-203ENST00000409033 ATP10BO94823 1461 aa17.16■□□□□ 0.34
ATG9A-203ENST00000409033 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
ATG9A-203ENST00000409033 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
ATG9A-203ENST00000409033 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
ATG9A-203ENST00000409033 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
ATG9A-203ENST00000409033 KDM6BO15054 1643 aa17.13■□□□□ 0.33
ATG9A-203ENST00000409033 KIF3BO15066 747 aa17.13■□□□□ 0.33
ATG9A-203ENST00000409033 ARHGAP5Q13017 1502 aa17.13■□□□□ 0.33
ATG9A-203ENST00000409033 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
ATG9A-203ENST00000409033 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
ATG9A-203ENST00000409033 GGT6Q6P531 493 aa17.12■□□□□ 0.33
ATG9A-203ENST00000409033 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
ATG9A-203ENST00000409033 KIF14Q15058 1648 aa17.12■□□□□ 0.33
ATG9A-203ENST00000409033 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
ATG9A-203ENST00000409033 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
ATG9A-203ENST00000409033 NUP160Q12769 1436 aa17.1■□□□□ 0.33
ATG9A-203ENST00000409033 AKNAQ7Z591 1439 aa17.08■□□□□ 0.33
ATG9A-203ENST00000409033 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.33
ATG9A-203ENST00000409033 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
ATG9A-203ENST00000409033 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
ATG9A-203ENST00000409033 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
ATG9A-203ENST00000409033 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
ATG9A-203ENST00000409033 USP47Q96K76 1375 aa17.07■□□□□ 0.32
ATG9A-203ENST00000409033 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
ATG9A-203ENST00000409033 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
ATG9A-203ENST00000409033 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
ATG9A-203ENST00000409033 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
ATG9A-203ENST00000409033 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
ATG9A-203ENST00000409033 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
ATG9A-203ENST00000409033 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
ATG9A-203ENST00000409033 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
ATG9A-203ENST00000409033 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
ATG9A-203ENST00000409033 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.32
ATG9A-203ENST00000409033 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
ATG9A-203ENST00000409033 MLECQ14165 292 aa16.97■□□□□ 0.31
ATG9A-203ENST00000409033 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
ATG9A-203ENST00000409033 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG9A-203ENST00000409033 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
ATG9A-203ENST00000409033 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
ATG9A-203ENST00000409033 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
ATG9A-203ENST00000409033 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
ATG9A-203ENST00000409033 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
ATG9A-203ENST00000409033 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
ATG9A-203ENST00000409033 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-203ENST00000409033 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
ATG9A-203ENST00000409033 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
ATG9A-203ENST00000409033 PZPP20742 1482 aa16.91■□□□□ 0.3
ATG9A-203ENST00000409033 CHD1O14646 1710 aa16.9■□□□□ 0.3
ATG9A-203ENST00000409033 KANK1Q14678 1352 aa16.89■□□□□ 0.29
ATG9A-203ENST00000409033 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
ATG9A-203ENST00000409033 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
ATG9A-203ENST00000409033 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
ATG9A-203ENST00000409033 TMF1P82094 1093 aa16.87■□□□□ 0.29
ATG9A-203ENST00000409033 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
ATG9A-203ENST00000409033 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
ATG9A-203ENST00000409033 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
ATG9A-203ENST00000409033 ABCA8O94911 1581 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms