RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
RPE-203ENST00000408981 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
RPE-203ENST00000408981 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
RPE-203ENST00000408981 CAMSAP1Q5T5Y3 1602 aa15.32■□□□□ 0.04
RPE-203ENST00000408981 RICTORQ6R327 1708 aa15.32■□□□□ 0.04
RPE-203ENST00000408981 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
RPE-203ENST00000408981 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
RPE-203ENST00000408981 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
RPE-203ENST00000408981 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.04
RPE-203ENST00000408981 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
RPE-203ENST00000408981 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
RPE-203ENST00000408981 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
RPE-203ENST00000408981 ABCA8O94911 1581 aa15.26■□□□□ 0.03
RPE-203ENST00000408981 PKD2Q13563 968 aa15.25■□□□□ 0.03
RPE-203ENST00000408981 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
RPE-203ENST00000408981 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
RPE-203ENST00000408981 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
RPE-203ENST00000408981 ATP10AO60312 1499 aa15.21■□□□□ 0.03
RPE-203ENST00000408981 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
RPE-203ENST00000408981 C3P01024 1663 aa15.21■□□□□ 0.03
RPE-203ENST00000408981 CPS1P31327 1500 aa15.21■□□□□ 0.03
RPE-203ENST00000408981 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
RPE-203ENST00000408981 HECW1Q76N89 1606 aa15.2■□□□□ 0.02
RPE-203ENST00000408981 ALKQ9UM73 1620 aa15.18■□□□□ 0.02
RPE-203ENST00000408981 ATP10BO94823 1461 aa15.16■□□□□ 0.02
RPE-203ENST00000408981 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
RPE-203ENST00000408981 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
RPE-203ENST00000408981 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
RPE-203ENST00000408981 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
RPE-203ENST00000408981 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
RPE-203ENST00000408981 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
RPE-203ENST00000408981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
RPE-203ENST00000408981 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
RPE-203ENST00000408981 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
RPE-203ENST00000408981 GOLGA3Q08378 1498 aa15.07■□□□□ 0
RPE-203ENST00000408981 NPATQ14207 1427 aa15.06■□□□□ 0
RPE-203ENST00000408981 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ -0
RPE-203ENST00000408981 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
RPE-203ENST00000408981 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
RPE-203ENST00000408981 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
RPE-203ENST00000408981 SUPT6HQ7KZ85 1726 aaKnown RBP15.02□□□□□ -0.01
RPE-203ENST00000408981 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
RPE-203ENST00000408981 FOXD1Q16676 465 aa15.01□□□□□ -0.01
RPE-203ENST00000408981 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
RPE-203ENST00000408981 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
RPE-203ENST00000408981 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
RPE-203ENST00000408981 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
RPE-203ENST00000408981 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
RPE-203ENST00000408981 AGLP35573 1532 aa14.97□□□□□ -0.01
RPE-203ENST00000408981 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.01
RPE-203ENST00000408981 VWDEQ8N2E2 1590 aa14.94□□□□□ -0.02
RPE-203ENST00000408981 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
RPE-203ENST00000408981 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
RPE-203ENST00000408981 RXRBP28702 533 aa14.92□□□□□ -0.02
RPE-203ENST00000408981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.02
RPE-203ENST00000408981 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
RPE-203ENST00000408981 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
RPE-203ENST00000408981 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
RPE-203ENST00000408981 REREQ9P2R6 1566 aa14.9□□□□□ -0.02
RPE-203ENST00000408981 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
RPE-203ENST00000408981 MEX3CQ5U5Q3 659 aaKnown RBP14.87□□□□□ -0.03
RPE-203ENST00000408981 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
RPE-203ENST00000408981 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
RPE-203ENST00000408981 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
RPE-203ENST00000408981 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
RPE-203ENST00000408981 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
RPE-203ENST00000408981 CDK12Q9NYV4 1490 aaPredicted RBP14.84□□□□□ -0.03
RPE-203ENST00000408981 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
RPE-203ENST00000408981 SYNMO15061 1565 aa14.83□□□□□ -0.04
RPE-203ENST00000408981 ANKLE2Q86XL3 938 aa14.83□□□□□ -0.04
RPE-203ENST00000408981 RAPGEF6Q8TEU7 1601 aa14.83□□□□□ -0.04
RPE-203ENST00000408981 CTTNBP2Q8WZ74 1663 aa14.83□□□□□ -0.04
RPE-203ENST00000408981 PLCH2O75038 1416 aa14.83□□□□□ -0.04
RPE-203ENST00000408981 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
RPE-203ENST00000408981 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
RPE-203ENST00000408981 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
RPE-203ENST00000408981 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
RPE-203ENST00000408981 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
RPE-203ENST00000408981 NUTM2AQ8IVF1 878 aaPredicted RBP14.82□□□□□ -0.04
RPE-203ENST00000408981 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
RPE-203ENST00000408981 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
RPE-203ENST00000408981 YY1P25490 414 aa14.8□□□□□ -0.04
RPE-203ENST00000408981 JCADQ9P266 1359 aa14.8□□□□□ -0.04
RPE-203ENST00000408981 KDM5CP41229 1560 aa14.8□□□□□ -0.04
RPE-203ENST00000408981 NUP153P49790 1475 aaKnown RBP14.78□□□□□ -0.04
RPE-203ENST00000408981 STRCP1A6NGW2 1772 aa14.78□□□□□ -0.04
RPE-203ENST00000408981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
RPE-203ENST00000408981 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
RPE-203ENST00000408981 LRP6O75581 1613 aa14.74□□□□□ -0.05
RPE-203ENST00000408981 MLH3Q9UHC1 1453 aa14.74□□□□□ -0.05
RPE-203ENST00000408981 CLTCQ00610 1675 aaKnown RBP14.74□□□□□ -0.05
RPE-203ENST00000408981 RGS12O14924 1447 aa14.74□□□□□ -0.05
RPE-203ENST00000408981 ROBO1Q9Y6N7 1651 aa14.73□□□□□ -0.05
RPE-203ENST00000408981 MED14O60244 1454 aa14.72□□□□□ -0.05
RPE-203ENST00000408981 SENP3-EIF4A1A0A087X0R7 540 aa14.72□□□□□ -0.05
RPE-203ENST00000408981 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
RPE-203ENST00000408981 LRP5O75197 1615 aa14.7□□□□□ -0.06
RPE-203ENST00000408981 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
RPE-203ENST00000408981 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
RPE-203ENST00000408981 ABCC1P33527 1531 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms