RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
LTBP1-204ENST00000407925 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
LTBP1-204ENST00000407925 SRPK2P78362 688 aaKnown RBP13.59□□□□□ -0.23
LTBP1-204ENST00000407925 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.23
LTBP1-204ENST00000407925 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
LTBP1-204ENST00000407925 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
LTBP1-204ENST00000407925 DCAF11Q8TEB1 546 aa13.57□□□□□ -0.24
LTBP1-204ENST00000407925 TPM4P67936 248 aa13.57□□□□□ -0.24
LTBP1-204ENST00000407925 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
LTBP1-204ENST00000407925 RALBP1Q15311 655 aa13.56□□□□□ -0.24
LTBP1-204ENST00000407925 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
LTBP1-204ENST00000407925 NACADO15069 1562 aa13.53□□□□□ -0.24
LTBP1-204ENST00000407925 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
LTBP1-204ENST00000407925 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
LTBP1-204ENST00000407925 CLSTN1O94985 981 aa13.53□□□□□ -0.24
LTBP1-204ENST00000407925 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
LTBP1-204ENST00000407925 TMX4Q9H1E5 349 aaPredicted RBP13.53□□□□□ -0.24
LTBP1-204ENST00000407925 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
LTBP1-204ENST00000407925 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
LTBP1-204ENST00000407925 HMMRO75330 724 aa13.52□□□□□ -0.24
LTBP1-204ENST00000407925 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.24
LTBP1-204ENST00000407925 CHMP4CQ96CF2 233 aa13.52□□□□□ -0.25
LTBP1-204ENST00000407925 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
LTBP1-204ENST00000407925 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
LTBP1-204ENST00000407925 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
LTBP1-204ENST00000407925 SETD5Q9C0A6 1442 aa13.5□□□□□ -0.25
LTBP1-204ENST00000407925 STK31Q9BXU1 1019 aa13.5□□□□□ -0.25
LTBP1-204ENST00000407925 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
LTBP1-204ENST00000407925 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
LTBP1-204ENST00000407925 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
LTBP1-204ENST00000407925 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
LTBP1-204ENST00000407925 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
LTBP1-204ENST00000407925 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
LTBP1-204ENST00000407925 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
LTBP1-204ENST00000407925 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
LTBP1-204ENST00000407925 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
LTBP1-204ENST00000407925 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.26
LTBP1-204ENST00000407925 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
LTBP1-204ENST00000407925 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
LTBP1-204ENST00000407925 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
LTBP1-204ENST00000407925 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
LTBP1-204ENST00000407925 PHF14O94880 888 aa13.44□□□□□ -0.26
LTBP1-204ENST00000407925 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
LTBP1-204ENST00000407925 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
LTBP1-204ENST00000407925 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
LTBP1-204ENST00000407925 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
LTBP1-204ENST00000407925 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
LTBP1-204ENST00000407925 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
LTBP1-204ENST00000407925 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
LTBP1-204ENST00000407925 PKD2Q13563 968 aa13.43□□□□□ -0.26
LTBP1-204ENST00000407925 ANKRD30AQ9BXX3 1397 aa13.43□□□□□ -0.26
LTBP1-204ENST00000407925 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
LTBP1-204ENST00000407925 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
LTBP1-204ENST00000407925 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
LTBP1-204ENST00000407925 DEKP35659 375 aaKnown RBP13.41□□□□□ -0.26
LTBP1-204ENST00000407925 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
LTBP1-204ENST00000407925 CUX2O14529 1486 aa13.4□□□□□ -0.26
LTBP1-204ENST00000407925 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.27
LTBP1-204ENST00000407925 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.27
LTBP1-204ENST00000407925 SOX12O15370 315 aa13.39□□□□□ -0.27
LTBP1-204ENST00000407925 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
LTBP1-204ENST00000407925 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
LTBP1-204ENST00000407925 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
LTBP1-204ENST00000407925 TPM3P06753 285 aa13.39□□□□□ -0.27
LTBP1-204ENST00000407925 GGT6Q6P531 493 aa13.39□□□□□ -0.27
LTBP1-204ENST00000407925 ST18O60284 1047 aa13.38□□□□□ -0.27
LTBP1-204ENST00000407925 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
LTBP1-204ENST00000407925 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
LTBP1-204ENST00000407925 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
LTBP1-204ENST00000407925 MLECQ14165 292 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
LTBP1-204ENST00000407925 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 NUP155O75694 1391 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 APBB1O00213 710 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
LTBP1-204ENST00000407925 KIF16BQ96L93 1317 aa13.35□□□□□ -0.27
LTBP1-204ENST00000407925 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
LTBP1-204ENST00000407925 STK26Q9P289 416 aa13.35□□□□□ -0.27
LTBP1-204ENST00000407925 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
LTBP1-204ENST00000407925 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
LTBP1-204ENST00000407925 A0A0U1RQG5 324 aaPredicted RBP13.35□□□□□ -0.27
LTBP1-204ENST00000407925 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
LTBP1-204ENST00000407925 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
LTBP1-204ENST00000407925 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
LTBP1-204ENST00000407925 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
LTBP1-204ENST00000407925 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
LTBP1-204ENST00000407925 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
LTBP1-204ENST00000407925 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
LTBP1-204ENST00000407925 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
LTBP1-204ENST00000407925 G3V3G9 751 aa13.31□□□□□ -0.28
LTBP1-204ENST00000407925 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
LTBP1-204ENST00000407925 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 IPO9Q96P70 1041 aaKnown RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 SLKQ9H2G2 1235 aaPredicted RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 MFAP1P55081 439 aaKnown RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
LTBP1-204ENST00000407925 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms