RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 MLECQ14165 292 aa20.43■□□□□ 0.86
APOBEC3B-204ENST00000407298 EFCAB2Q5VUJ9 269 aa20.43■□□□□ 0.86
APOBEC3B-204ENST00000407298 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
APOBEC3B-204ENST00000407298 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
APOBEC3B-204ENST00000407298 HECW1Q76N89 1606 aa20.39■□□□□ 0.86
APOBEC3B-204ENST00000407298 CDK13Q14004 1512 aaKnown RBP20.38■□□□□ 0.85
APOBEC3B-204ENST00000407298 ATP10AO60312 1499 aa20.38■□□□□ 0.85
APOBEC3B-204ENST00000407298 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
APOBEC3B-204ENST00000407298 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
APOBEC3B-204ENST00000407298 CERKQ8TCT0 537 aa20.37■□□□□ 0.85
APOBEC3B-204ENST00000407298 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
APOBEC3B-204ENST00000407298 FER1L4A9Z1Z3 1794 aa20.35■□□□□ 0.85
APOBEC3B-204ENST00000407298 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
APOBEC3B-204ENST00000407298 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
APOBEC3B-204ENST00000407298 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
APOBEC3B-204ENST00000407298 ZNF518AQ6AHZ1 1483 aa20.3■□□□□ 0.84
APOBEC3B-204ENST00000407298 MYO5CQ9NQX4 1742 aa20.3■□□□□ 0.84
APOBEC3B-204ENST00000407298 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
APOBEC3B-204ENST00000407298 CLIP1P30622 1438 aa20.29■□□□□ 0.84
APOBEC3B-204ENST00000407298 KIF14Q15058 1648 aa20.27■□□□□ 0.83
APOBEC3B-204ENST00000407298 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.83
APOBEC3B-204ENST00000407298 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
APOBEC3B-204ENST00000407298 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
APOBEC3B-204ENST00000407298 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
APOBEC3B-204ENST00000407298 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
APOBEC3B-204ENST00000407298 ARHGAP5Q13017 1502 aa20.25■□□□□ 0.83
APOBEC3B-204ENST00000407298 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
APOBEC3B-204ENST00000407298 SETD1BQ9UPS6 1966 aaKnown RBP20.24■□□□□ 0.83
APOBEC3B-204ENST00000407298 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
APOBEC3B-204ENST00000407298 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
APOBEC3B-204ENST00000407298 KDM5CP41229 1560 aa20.21■□□□□ 0.83
APOBEC3B-204ENST00000407298 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
APOBEC3B-204ENST00000407298 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
APOBEC3B-204ENST00000407298 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
APOBEC3B-204ENST00000407298 AGLP35573 1532 aa20.13■□□□□ 0.81
APOBEC3B-204ENST00000407298 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
APOBEC3B-204ENST00000407298 PTPRTO14522 1441 aa20.12■□□□□ 0.81
APOBEC3B-204ENST00000407298 STRCQ7RTU9 1775 aa20.12■□□□□ 0.81
APOBEC3B-204ENST00000407298 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
APOBEC3B-204ENST00000407298 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
APOBEC3B-204ENST00000407298 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
APOBEC3B-204ENST00000407298 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
APOBEC3B-204ENST00000407298 ABCC1P33527 1531 aa20.08■□□□□ 0.81
APOBEC3B-204ENST00000407298 PREX2Q70Z35 1606 aa20.08■□□□□ 0.8
APOBEC3B-204ENST00000407298 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
APOBEC3B-204ENST00000407298 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
APOBEC3B-204ENST00000407298 C3P01024 1663 aa20.07■□□□□ 0.8
APOBEC3B-204ENST00000407298 LRRIQ1Q96JM4 1722 aa20.05■□□□□ 0.8
APOBEC3B-204ENST00000407298 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
APOBEC3B-204ENST00000407298 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
APOBEC3B-204ENST00000407298 NPATQ14207 1427 aa20.02■□□□□ 0.79
APOBEC3B-204ENST00000407298 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.79
APOBEC3B-204ENST00000407298 KIDINS220Q9ULH0 1771 aa20.01■□□□□ 0.79
APOBEC3B-204ENST00000407298 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
APOBEC3B-204ENST00000407298 NCOA1Q15788 1441 aa20■□□□□ 0.79
APOBEC3B-204ENST00000407298 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
APOBEC3B-204ENST00000407298 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
APOBEC3B-204ENST00000407298 SOCS7O14512 581 aa19.98■□□□□ 0.79
APOBEC3B-204ENST00000407298 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
APOBEC3B-204ENST00000407298 SAMD9LQ8IVG5 1584 aa19.97■□□□□ 0.79
APOBEC3B-204ENST00000407298 HNRNPMP52272 730 aaKnown RBP eCLIP19.96■□□□□ 0.79
APOBEC3B-204ENST00000407298 ILDR2Q71H61 639 aa19.96■□□□□ 0.79
APOBEC3B-204ENST00000407298 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
APOBEC3B-204ENST00000407298 MROH2AA6NES4 1674 aa19.95■□□□□ 0.78
APOBEC3B-204ENST00000407298 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
APOBEC3B-204ENST00000407298 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
APOBEC3B-204ENST00000407298 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
APOBEC3B-204ENST00000407298 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
APOBEC3B-204ENST00000407298 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
APOBEC3B-204ENST00000407298 PKD2Q13563 968 aa19.93■□□□□ 0.78
APOBEC3B-204ENST00000407298 CAMSAP1Q5T5Y3 1602 aa19.93■□□□□ 0.78
APOBEC3B-204ENST00000407298 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
APOBEC3B-204ENST00000407298 CCNB3Q8WWL7 1395 aa19.91■□□□□ 0.78
APOBEC3B-204ENST00000407298 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
APOBEC3B-204ENST00000407298 A2MP01023 1474 aa19.9■□□□□ 0.78
APOBEC3B-204ENST00000407298 ATP7AQ04656 1500 aa19.89■□□□□ 0.77
APOBEC3B-204ENST00000407298 GGT6Q6P531 493 aa19.89■□□□□ 0.77
APOBEC3B-204ENST00000407298 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
APOBEC3B-204ENST00000407298 SPATA31D1Q6ZQQ2 1576 aa19.87■□□□□ 0.77
APOBEC3B-204ENST00000407298 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
APOBEC3B-204ENST00000407298 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
APOBEC3B-204ENST00000407298 UBAP1LF5GYI3 381 aa19.86■□□□□ 0.77
APOBEC3B-204ENST00000407298 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
APOBEC3B-204ENST00000407298 ZNF335Q9H4Z2 1342 aaPredicted RBP19.84■□□□□ 0.77
APOBEC3B-204ENST00000407298 PLXNC1O60486 1568 aa19.84■□□□□ 0.77
APOBEC3B-204ENST00000407298 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
APOBEC3B-204ENST00000407298 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.77
APOBEC3B-204ENST00000407298 ZNF142P52746 1687 aaPredicted RBP19.81■□□□□ 0.76
APOBEC3B-204ENST00000407298 CEP170BQ9Y4F5 1589 aaPredicted RBP19.81■□□□□ 0.76
APOBEC3B-204ENST00000407298 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
APOBEC3B-204ENST00000407298 TCOF1Q13428 1488 aaKnown RBP19.8■□□□□ 0.76
APOBEC3B-204ENST00000407298 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
APOBEC3B-204ENST00000407298 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
APOBEC3B-204ENST00000407298 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
APOBEC3B-204ENST00000407298 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
APOBEC3B-204ENST00000407298 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
APOBEC3B-204ENST00000407298 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
APOBEC3B-204ENST00000407298 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
APOBEC3B-204ENST00000407298 KIF3BO15066 747 aa19.72■□□□□ 0.75
APOBEC3B-204ENST00000407298 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms