RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, human

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-205	ENST00000406768	EXOC6	Q8TAG9	804 aa		11.66	□□□□□ -0.54
PSEN1-205	ENST00000406768	PTMA	P06454	111 aa	Known RBP	11.65	□□□□□ -0.54
PSEN1-205	ENST00000406768	TOP2B	Q02880	1626 aa		11.65	□□□□□ -0.54
PSEN1-205	ENST00000406768	ABCC8	Q09428	1581 aa		11.65	□□□□□ -0.54
PSEN1-205	ENST00000406768	SOGA1	O94964	1423 aa		11.64	□□□□□ -0.55
PSEN1-205	ENST00000406768	SPRYD3	Q8NCJ5	442 aa		11.64	□□□□□ -0.55
PSEN1-205	ENST00000406768	FAM161A	Q3B820	660 aa		11.64	□□□□□ -0.55
PSEN1-205	ENST00000406768	HSPA5	P11021	654 aa	Known RBP	11.63	□□□□□ -0.55
PSEN1-205	ENST00000406768	MTERF4	Q7Z6M4	381 aa	Known RBP	11.63	□□□□□ -0.55
PSEN1-205	ENST00000406768	CEP164	Q9UPV0	1460 aa		11.63	□□□□□ -0.55
PSEN1-205	ENST00000406768	BBX	Q8WY36	941 aa	Predicted RBP	11.62	□□□□□ -0.55
PSEN1-205	ENST00000406768	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.62	□□□□□ -0.55
PSEN1-205	ENST00000406768	SETD5	Q9C0A6	1442 aa		11.62	□□□□□ -0.55
PSEN1-205	ENST00000406768	MRE11	P49959	708 aa		11.62	□□□□□ -0.55
PSEN1-205	ENST00000406768	ESPN	B1AK53	854 aa		11.61	□□□□□ -0.55
PSEN1-205	ENST00000406768	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.61	□□□□□ -0.55
PSEN1-205	ENST00000406768	CLCN1	P35523	988 aa		11.6	□□□□□ -0.55
PSEN1-205	ENST00000406768	RRP1	P56182	461 aa	Known RBP	11.6	□□□□□ -0.55
PSEN1-205	ENST00000406768	FGD1	P98174	961 aa		11.6	□□□□□ -0.55
PSEN1-205	ENST00000406768	PDS5B	Q9NTI5	1447 aa		11.6	□□□□□ -0.55
PSEN1-205	ENST00000406768	KIAA1211	Q6ZU35	1233 aa		11.59	□□□□□ -0.55
PSEN1-205	ENST00000406768	KANK4	Q5T7N3	995 aa	Predicted RBP	11.59	□□□□□ -0.55
PSEN1-205	ENST00000406768	POGK	Q9P215	609 aa		11.59	□□□□□ -0.55
PSEN1-205	ENST00000406768	CALD1	Q05682	793 aa	Known RBP	11.58	□□□□□ -0.56
PSEN1-205	ENST00000406768	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.58	□□□□□ -0.56
PSEN1-205	ENST00000406768	SYNJ1	O43426	1573 aa		11.57	□□□□□ -0.56
PSEN1-205	ENST00000406768	AAMP	Q13685	434 aa		11.57	□□□□□ -0.56
PSEN1-205	ENST00000406768	FANCD2	Q9BXW9	1451 aa		11.56	□□□□□ -0.56
PSEN1-205	ENST00000406768	AKNA	Q7Z591	1439 aa		11.56	□□□□□ -0.56
PSEN1-205	ENST00000406768	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.56	□□□□□ -0.56
PSEN1-205	ENST00000406768	GBP4	Q96PP9	640 aa		11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	HSCB	Q8IWL3	235 aa		11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	DDX11L8	A8MPP1	907 aa		11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	DNMBP	Q6XZF7	1577 aa		11.55	□□□□□ -0.56
PSEN1-205	ENST00000406768	PTMS	P20962	102 aa		11.53	□□□□□ -0.56
PSEN1-205	ENST00000406768	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.53	□□□□□ -0.56
PSEN1-205	ENST00000406768	TNNT3	P45378	269 aa	Predicted RBP	11.53	□□□□□ -0.56
PSEN1-205	ENST00000406768	ZBTB7C	A1YPR0	619 aa		11.52	□□□□□ -0.56
PSEN1-205	ENST00000406768	DCAF11	Q8TEB1	546 aa		11.52	□□□□□ -0.56
PSEN1-205	ENST00000406768	CHAF1A	Q13111	956 aa	Predicted RBP	11.52	□□□□□ -0.57
PSEN1-205	ENST00000406768	CUX1	P39880	1505 aa		11.52	□□□□□ -0.57
PSEN1-205	ENST00000406768	HSP90AB1	P08238	724 aa	Known RBP	11.51	□□□□□ -0.57
PSEN1-205	ENST00000406768	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.51	□□□□□ -0.57
PSEN1-205	ENST00000406768	TAF7L	Q5H9L4	462 aa		11.51	□□□□□ -0.57
PSEN1-205	ENST00000406768	PRDM10	Q9NQV6	1147 aa		11.5	□□□□□ -0.57
PSEN1-205	ENST00000406768	CSPP1	Q1MSJ5	1256 aa		11.5	□□□□□ -0.57
PSEN1-205	ENST00000406768	PDE3B	Q13370	1112 aa		11.5	□□□□□ -0.57
PSEN1-205	ENST00000406768	TRAK2	O60296	914 aa		11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	WDR43	Q15061	677 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	SMG6	Q86US8	1419 aa	Known RBP	11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	PLIN1	O60240	522 aa		11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	CRBN	Q96SW2	442 aa		11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	GRPEL1	Q9HAV7	217 aa		11.49	□□□□□ -0.57
PSEN1-205	ENST00000406768	KIAA2012	Q0VF49	1180 aa		11.48	□□□□□ -0.57
PSEN1-205	ENST00000406768	ISY1	Q9ULR0	285 aa	Known RBP	11.48	□□□□□ -0.57
PSEN1-205	ENST00000406768	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.48	□□□□□ -0.57
PSEN1-205	ENST00000406768	CCDC184	Q52MB2	194 aa		11.48	□□□□□ -0.57
PSEN1-205	ENST00000406768	P3H3	Q8IVL6	736 aa		11.48	□□□□□ -0.57
PSEN1-205	ENST00000406768	KTN1	Q86UP2	1357 aa	Known RBP	11.47	□□□□□ -0.57
PSEN1-205	ENST00000406768	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.47	□□□□□ -0.57
PSEN1-205	ENST00000406768	CHMP5	Q9NZZ3	219 aa		11.47	□□□□□ -0.57
PSEN1-205	ENST00000406768	KIF21B	O75037	1637 aa		11.47	□□□□□ -0.57
PSEN1-205	ENST00000406768	WDR97	A6NE52	1622 aa		11.46	□□□□□ -0.57
PSEN1-205	ENST00000406768	UQCRHL	A0A096LP55	91 aa		11.45	□□□□□ -0.58
PSEN1-205	ENST00000406768	UQCRH	P07919	91 aa		11.45	□□□□□ -0.58
PSEN1-205	ENST00000406768	XRCC6	P12956	609 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
PSEN1-205	ENST00000406768	KIF27	Q86VH2	1401 aa		11.45	□□□□□ -0.58
PSEN1-205	ENST00000406768	TOPBP1	Q92547	1522 aa		11.44	□□□□□ -0.58
PSEN1-205	ENST00000406768	TAF3	Q5VWG9	929 aa		11.44	□□□□□ -0.58
PSEN1-205	ENST00000406768	MRC2	Q9UBG0	1479 aa		11.44	□□□□□ -0.58
PSEN1-205	ENST00000406768	NASP	P49321	788 aa	Predicted RBP	11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	CCDC173	Q0VFZ6	552 aa		11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	CHMP4B	Q9H444	224 aa	Known RBP	11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	CHIC2	Q9UKJ5	165 aa		11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	ZSCAN30	Q86W11	494 aa		11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.43	□□□□□ -0.58
PSEN1-205	ENST00000406768	CNTLN	Q9NXG0	1405 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	NES	P48681	1621 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	MCM4	P33991	863 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	KIF21A	Q7Z4S6	1674 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	ERICH3	Q5RHP9	1530 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	PANK2	Q9BZ23	570 aa		11.42	□□□□□ -0.58
PSEN1-205	ENST00000406768	FGD5	Q6ZNL6	1462 aa		11.41	□□□□□ -0.58
PSEN1-205	ENST00000406768	DDX49	Q9Y6V7	483 aa	Known RBP	11.41	□□□□□ -0.58
PSEN1-205	ENST00000406768	PLCB2	Q00722	1185 aa		11.4	□□□□□ -0.58
PSEN1-205	ENST00000406768	APP	P05067	770 aa		11.4	□□□□□ -0.58
PSEN1-205	ENST00000406768	ABCA10	Q8WWZ4	1543 aa		11.4	□□□□□ -0.58
PSEN1-205	ENST00000406768	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.4	□□□□□ -0.58
PSEN1-205	ENST00000406768	MAPK8IP3	Q9UPT6	1336 aa		11.4	□□□□□ -0.59
PSEN1-205	ENST00000406768	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.39	□□□□□ -0.59
PSEN1-205	ENST00000406768	RRP7BP	Q9NSQ0	103 aa		11.39	□□□□□ -0.59
PSEN1-205	ENST00000406768	CCDC66	A2RUB6	948 aa		11.38	□□□□□ -0.59
PSEN1-205	ENST00000406768	PLCD3	Q8N3E9	789 aa		11.38	□□□□□ -0.59
PSEN1-205	ENST00000406768	WDR62	O43379	1518 aa		11.38	□□□□□ -0.59
PSEN1-205	ENST00000406768	MFAP1	P55081	439 aa	Known RBP	11.38	□□□□□ -0.59
PSEN1-205	ENST00000406768	URB2	Q14146	1524 aa	Known RBP	11.37	□□□□□ -0.59
PSEN1-205	ENST00000406768	SKAP1	Q86WV1	359 aa		11.37	□□□□□ -0.59
PSEN1-205	ENST00000406768	RALBP1	Q15311	655 aa		11.36	□□□□□ -0.59

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