RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 NACADO15069 1562 aa15.27■□□□□ 0.04
SMCR8-201ENST00000406438 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
SMCR8-201ENST00000406438 SOX12O15370 315 aa15.26■□□□□ 0.03
SMCR8-201ENST00000406438 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
SMCR8-201ENST00000406438 DCAF11Q8TEB1 546 aa15.24■□□□□ 0.03
SMCR8-201ENST00000406438 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
SMCR8-201ENST00000406438 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
SMCR8-201ENST00000406438 CALD1Q05682 793 aaKnown RBP15.23■□□□□ 0.03
SMCR8-201ENST00000406438 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
SMCR8-201ENST00000406438 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
SMCR8-201ENST00000406438 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
SMCR8-201ENST00000406438 SPRYD3Q8NCJ5 442 aa15.22■□□□□ 0.03
SMCR8-201ENST00000406438 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
SMCR8-201ENST00000406438 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.03
SMCR8-201ENST00000406438 TPM4P67936 248 aa15.2■□□□□ 0.02
SMCR8-201ENST00000406438 GBP4Q96PP9 640 aa15.2■□□□□ 0.02
SMCR8-201ENST00000406438 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
SMCR8-201ENST00000406438 CCDC34Q96HJ3 373 aa15.2■□□□□ 0.02
SMCR8-201ENST00000406438 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
SMCR8-201ENST00000406438 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
SMCR8-201ENST00000406438 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
SMCR8-201ENST00000406438 MLECQ14165 292 aa15.16■□□□□ 0.02
SMCR8-201ENST00000406438 KTN1Q86UP2 1357 aaKnown RBP15.16■□□□□ 0.02
SMCR8-201ENST00000406438 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
SMCR8-201ENST00000406438 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMCR8-201ENST00000406438 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
SMCR8-201ENST00000406438 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
SMCR8-201ENST00000406438 APBB1O00213 710 aa15.15■□□□□ 0.02
SMCR8-201ENST00000406438 GORABQ5T7V8 394 aa15.15■□□□□ 0.02
SMCR8-201ENST00000406438 GOLGA6L1Q8N7Z2 621 aa15.14■□□□□ 0.01
SMCR8-201ENST00000406438 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
SMCR8-201ENST00000406438 G3V3G9 751 aa15.13■□□□□ 0.01
SMCR8-201ENST00000406438 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
SMCR8-201ENST00000406438 TAF7LQ5H9L4 462 aa15.13■□□□□ 0.01
SMCR8-201ENST00000406438 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
SMCR8-201ENST00000406438 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
SMCR8-201ENST00000406438 STK26Q9P289 416 aa15.12■□□□□ 0.01
SMCR8-201ENST00000406438 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
SMCR8-201ENST00000406438 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
SMCR8-201ENST00000406438 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
SMCR8-201ENST00000406438 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
SMCR8-201ENST00000406438 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
SMCR8-201ENST00000406438 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
SMCR8-201ENST00000406438 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
SMCR8-201ENST00000406438 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
SMCR8-201ENST00000406438 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
SMCR8-201ENST00000406438 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
SMCR8-201ENST00000406438 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
SMCR8-201ENST00000406438 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
SMCR8-201ENST00000406438 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
SMCR8-201ENST00000406438 MYO15BQ96JP2 1530 aa15.08■□□□□ 0
SMCR8-201ENST00000406438 PHF14O94880 888 aa15.08■□□□□ 0
SMCR8-201ENST00000406438 RASSF8Q8NHQ8 419 aa15.08■□□□□ 0
SMCR8-201ENST00000406438 CEP89Q96ST8 783 aa15.07■□□□□ 0
SMCR8-201ENST00000406438 STK31Q9BXU1 1019 aa15.07■□□□□ 0
SMCR8-201ENST00000406438 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
SMCR8-201ENST00000406438 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ 0
SMCR8-201ENST00000406438 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ 0
SMCR8-201ENST00000406438 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
SMCR8-201ENST00000406438 CCDC9Q9Y3X0 531 aaKnown RBP15.04■□□□□ -0
SMCR8-201ENST00000406438 HMMRO75330 724 aa15.04■□□□□ -0
SMCR8-201ENST00000406438 PRDM2Q13029 1718 aa15.04■□□□□ -0
SMCR8-201ENST00000406438 PDE4CQ08493 712 aa15.04■□□□□ -0
SMCR8-201ENST00000406438 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
SMCR8-201ENST00000406438 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
SMCR8-201ENST00000406438 RCAN3Q9UKA8 241 aa15.03■□□□□ -0
SMCR8-201ENST00000406438 TNNT3P45378 269 aaPredicted RBP15.03■□□□□ -0
SMCR8-201ENST00000406438 GGT6Q6P531 493 aa15.03■□□□□ -0
SMCR8-201ENST00000406438 CREBRFQ8IUR6 639 aa15.03■□□□□ -0
SMCR8-201ENST00000406438 CCER2I3L3R5 266 aa15.03■□□□□ -0
SMCR8-201ENST00000406438 VPS53Q5VIR6 699 aa15.02□□□□□ -0.01
SMCR8-201ENST00000406438 RALBP1Q15311 655 aa15.01□□□□□ -0.01
SMCR8-201ENST00000406438 CARMIL2Q6F5E8 1435 aa15.01□□□□□ -0.01
SMCR8-201ENST00000406438 KIF3AQ9Y496 699 aa15.01□□□□□ -0.01
SMCR8-201ENST00000406438 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
SMCR8-201ENST00000406438 SMC4Q9NTJ3 1288 aa14.99□□□□□ -0.01
SMCR8-201ENST00000406438 KIF16BQ96L93 1317 aa14.99□□□□□ -0.01
SMCR8-201ENST00000406438 FRAT2O75474 233 aaPredicted RBP14.99□□□□□ -0.01
SMCR8-201ENST00000406438 CUX2O14529 1486 aa14.99□□□□□ -0.01
SMCR8-201ENST00000406438 TPM3P06753 285 aa14.99□□□□□ -0.01
SMCR8-201ENST00000406438 SLKQ9H2G2 1235 aaPredicted RBP14.98□□□□□ -0.01
SMCR8-201ENST00000406438 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
SMCR8-201ENST00000406438 TSR1Q2NL82 804 aaKnown RBP14.98□□□□□ -0.01
SMCR8-201ENST00000406438 KRI1Q8N9T8 703 aaKnown RBP14.98□□□□□ -0.01
SMCR8-201ENST00000406438 MARCH6O60337 910 aa14.98□□□□□ -0.01
SMCR8-201ENST00000406438 ST18O60284 1047 aa14.97□□□□□ -0.01
SMCR8-201ENST00000406438 LMOD3Q0VAK6 560 aa14.97□□□□□ -0.01
SMCR8-201ENST00000406438 ARID3AQ99856 593 aa14.97□□□□□ -0.01
SMCR8-201ENST00000406438 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
SMCR8-201ENST00000406438 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
SMCR8-201ENST00000406438 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
SMCR8-201ENST00000406438 MFAP1P55081 439 aaKnown RBP14.96□□□□□ -0.01
SMCR8-201ENST00000406438 SLC4A10Q6U841 1118 aa14.96□□□□□ -0.01
SMCR8-201ENST00000406438 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.02
SMCR8-201ENST00000406438 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
SMCR8-201ENST00000406438 GOLGA6L3A6NEY3 463 aa14.95□□□□□ -0.02
SMCR8-201ENST00000406438 PKD2Q13563 968 aa14.95□□□□□ -0.02
SMCR8-201ENST00000406438 SF3A1Q15459 793 aaKnown RBP14.95□□□□□ -0.02
SMCR8-201ENST00000406438 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
SMCR8-201ENST00000406438 TCEAL9Q9UHQ7 104 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms