RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TTC37Q6PGP7 1564 aa34.82■■■■□ 3.16
RHBDD3-202ENST00000406335 EFCAB2Q5VUJ9 269 aa34.81■■■■□ 3.16
RHBDD3-202ENST00000406335 MAGI2Q86UL8 1455 aa34.8■■■■□ 3.16
RHBDD3-202ENST00000406335 MYT1LQ9UL68 1186 aa34.8■■■■□ 3.16
RHBDD3-202ENST00000406335 PLCH2O75038 1416 aa34.8■■■■□ 3.16
RHBDD3-202ENST00000406335 ZMYM4Q5VZL5 1548 aa34.76■■■■□ 3.15
RHBDD3-202ENST00000406335 FMN1Q68DA7 1419 aa34.72■■■■□ 3.15
RHBDD3-202ENST00000406335 HECW1Q76N89 1606 aa34.72■■■■□ 3.15
RHBDD3-202ENST00000406335 ATP10AO60312 1499 aa34.67■■■■□ 3.14
RHBDD3-202ENST00000406335 CERKQ8TCT0 537 aa34.63■■■■□ 3.13
RHBDD3-202ENST00000406335 C9orf84Q5VXU9 1444 aa34.63■■■■□ 3.13
RHBDD3-202ENST00000406335 CEBPAP49715 358 aaPredicted RBP34.62■■■■□ 3.13
RHBDD3-202ENST00000406335 AFAP1Q8N556 730 aa34.61■■■■□ 3.13
RHBDD3-202ENST00000406335 CLIP1P30622 1438 aa34.58■■■■□ 3.13
RHBDD3-202ENST00000406335 SIGLEC1Q9BZZ2 1709 aa34.57■■■■□ 3.12
RHBDD3-202ENST00000406335 ARHGAP35Q9NRY4 1499 aa34.56■■■■□ 3.12
RHBDD3-202ENST00000406335 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
RHBDD3-202ENST00000406335 FER1L4A9Z1Z3 1794 aa34.54■■■■□ 3.12
RHBDD3-202ENST00000406335 ESF1Q9H501 851 aaKnown RBP34.54■■■■□ 3.12
RHBDD3-202ENST00000406335 TROQ12816 1431 aaPredicted RBP34.53■■■■□ 3.12
RHBDD3-202ENST00000406335 ZNF518AQ6AHZ1 1483 aa34.52■■■■□ 3.12
RHBDD3-202ENST00000406335 MYO5CQ9NQX4 1742 aa34.5■■■■□ 3.11
RHBDD3-202ENST00000406335 DMRT2Q9Y5R5 561 aa34.5■■■■□ 3.11
RHBDD3-202ENST00000406335 KIF14Q15058 1648 aa34.5■■■■□ 3.11
RHBDD3-202ENST00000406335 ARHGEF12Q9NZN5 1544 aa34.5■■■■□ 3.11
RHBDD3-202ENST00000406335 UHRF1BP1Q6BDS2 1440 aa34.4■■■■□ 3.1
RHBDD3-202ENST00000406335 PREX1Q8TCU6 1659 aa34.34■■■■□ 3.09
RHBDD3-202ENST00000406335 ZNF777Q9ULD5 760 aaPredicted RBP34.33■■■■□ 3.09
RHBDD3-202ENST00000406335 KDM5CP41229 1560 aa34.32■■■■□ 3.09
RHBDD3-202ENST00000406335 MLH3Q9UHC1 1453 aa34.29■■■■□ 3.08
RHBDD3-202ENST00000406335 TRAPPC8Q9Y2L5 1435 aa34.29■■■■□ 3.08
RHBDD3-202ENST00000406335 DIP2CQ9Y2E4 1556 aa34.28■■■■□ 3.08
RHBDD3-202ENST00000406335 CCDC18Q5T9S5 1454 aa34.26■■■■□ 3.07
RHBDD3-202ENST00000406335 CASKIN1Q8WXD9 1431 aa34.25■■■■□ 3.07
RHBDD3-202ENST00000406335 REREQ9P2R6 1566 aa34.19■■■■□ 3.06
RHBDD3-202ENST00000406335 ABCA6Q8N139 1617 aa34.19■■■■□ 3.06
RHBDD3-202ENST00000406335 CDC42BPBQ9Y5S2 1711 aa34.18■■■■□ 3.06
RHBDD3-202ENST00000406335 ABCC1P33527 1531 aa34.18■■■■□ 3.06
RHBDD3-202ENST00000406335 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
RHBDD3-202ENST00000406335 AGLP35573 1532 aa34.15■■■■□ 3.06
RHBDD3-202ENST00000406335 DISP3Q9P2K9 1392 aa34.15■■■■□ 3.06
RHBDD3-202ENST00000406335 SPAG9O60271 1321 aaKnown RBP34.15■■■■□ 3.06
RHBDD3-202ENST00000406335 HNRNPMP52272 730 aaKnown RBP eCLIP34.15■■■■□ 3.06
RHBDD3-202ENST00000406335 PREX2Q70Z35 1606 aa34.15■■■■□ 3.06
RHBDD3-202ENST00000406335 CNTLNQ9NXG0 1405 aa34.14■■■■□ 3.06
RHBDD3-202ENST00000406335 PTPRTO14522 1441 aa34.13■■■■□ 3.05
RHBDD3-202ENST00000406335 STRCQ7RTU9 1775 aa34.11■■■■□ 3.05
RHBDD3-202ENST00000406335 SETD1BQ9UPS6 1966 aaKnown RBP34.11■■■■□ 3.05
RHBDD3-202ENST00000406335 C3P01024 1663 aa34.09■■■■□ 3.05
RHBDD3-202ENST00000406335 CFDP1Q9UEE9 299 aaPredicted RBP34.08■■■■□ 3.05
RHBDD3-202ENST00000406335 ITSN2Q9NZM3 1697 aa34.08■■■■□ 3.05
RHBDD3-202ENST00000406335 FYCO1Q9BQS8 1478 aa34.04■■■■□ 3.04
RHBDD3-202ENST00000406335 ZMYM3Q14202 1370 aa34.04■■■■□ 3.04
RHBDD3-202ENST00000406335 GGT6Q6P531 493 aa34.02■■■■□ 3.04
RHBDD3-202ENST00000406335 KIDINS220Q9ULH0 1771 aa34.02■■■■□ 3.04
RHBDD3-202ENST00000406335 CCNB3Q8WWL7 1395 aa34■■■■□ 3.03
RHBDD3-202ENST00000406335 GPATCH8Q9UKJ3 1502 aaKnown RBP33.99■■■■□ 3.03
RHBDD3-202ENST00000406335 SAMD9LQ8IVG5 1584 aa33.99■■■■□ 3.03
RHBDD3-202ENST00000406335 NCOA1Q15788 1441 aa33.98■■■■□ 3.03
RHBDD3-202ENST00000406335 CDC42BPAQ5VT25 1732 aa33.98■■■■□ 3.03
RHBDD3-202ENST00000406335 SYCP2Q9BX26 1530 aa33.98■■■■□ 3.03
RHBDD3-202ENST00000406335 NCKAP5LQ9HCH0 1330 aa33.97■■■■□ 3.03
RHBDD3-202ENST00000406335 NPATQ14207 1427 aa33.96■■■■□ 3.03
RHBDD3-202ENST00000406335 ILDR2Q71H61 639 aa33.95■■■■□ 3.03
RHBDD3-202ENST00000406335 MTUS2Q5JR59 1369 aa33.94■■■■□ 3.02
RHBDD3-202ENST00000406335 PLEKHH2Q8IVE3 1493 aa33.92■■■■□ 3.02
RHBDD3-202ENST00000406335 KIAA1107Q9UPP5 1409 aa33.91■■■■□ 3.02
RHBDD3-202ENST00000406335 CAMSAP1Q5T5Y3 1602 aa33.9■■■■□ 3.02
RHBDD3-202ENST00000406335 A2MP01023 1474 aa33.89■■■■□ 3.02
RHBDD3-202ENST00000406335 SUPT6HQ7KZ85 1726 aaKnown RBP33.87■■■■□ 3.01
RHBDD3-202ENST00000406335 ATP7AQ04656 1500 aa33.87■■■■□ 3.01
RHBDD3-202ENST00000406335 PKD2Q13563 968 aa33.86■■■■□ 3.01
RHBDD3-202ENST00000406335 LTBP4Q8N2S1 1624 aa33.86■■■■□ 3.01
RHBDD3-202ENST00000406335 SOCS7O14512 581 aa33.85■■■■□ 3.01
RHBDD3-202ENST00000406335 ZNF335Q9H4Z2 1342 aaPredicted RBP33.83■■■■□ 3.01
RHBDD3-202ENST00000406335 UBAP1LF5GYI3 381 aa33.83■■■■□ 3.01
RHBDD3-202ENST00000406335 PPP6R1Q9UPN7 881 aa33.82■■■■□ 3
RHBDD3-202ENST00000406335 ZNF644Q9H582 1327 aaPredicted RBP33.81■■■■□ 3
RHBDD3-202ENST00000406335 MROH2AA6NES4 1674 aa33.81■■■■□ 3
RHBDD3-202ENST00000406335 IQSEC2Q5JU85 1478 aa33.81■■■■□ 3
RHBDD3-202ENST00000406335 CLTCQ00610 1675 aaKnown RBP33.77■■■■□ 3
RHBDD3-202ENST00000406335 PTPRKQ15262 1439 aa33.76■■■□□ 2.99
RHBDD3-202ENST00000406335 INO80Q9ULG1 1556 aaPredicted RBP33.72■■■□□ 2.99
RHBDD3-202ENST00000406335 SPATA31D1Q6ZQQ2 1576 aa33.72■■■□□ 2.99
RHBDD3-202ENST00000406335 PLXNC1O60486 1568 aa33.71■■■□□ 2.99
RHBDD3-202ENST00000406335 PLA2R1Q13018 1463 aa33.69■■■□□ 2.98
RHBDD3-202ENST00000406335 KIF3BO15066 747 aa33.69■■■□□ 2.98
RHBDD3-202ENST00000406335 CEP170BQ9Y4F5 1589 aaPredicted RBP33.68■■■□□ 2.98
RHBDD3-202ENST00000406335 MYO3AQ8NEV4 1616 aa33.67■■■□□ 2.98
RHBDD3-202ENST00000406335 SCAF1Q9H7N4 1312 aaKnown RBP33.66■■■□□ 2.98
RHBDD3-202ENST00000406335 DHX29Q7Z478 1369 aaKnown RBP33.65■■■□□ 2.98
RHBDD3-202ENST00000406335 RTEL1-TNFRSF6BF6WH68 1400 aa33.62■■■□□ 2.97
RHBDD3-202ENST00000406335 WASHC2CQ9Y4E1 1318 aa33.62■■■□□ 2.97
RHBDD3-202ENST00000406335 FBXO31Q5XUX0 539 aaPredicted RBP33.62■■■□□ 2.97
RHBDD3-202ENST00000406335 TCOF1Q13428 1488 aaKnown RBP33.62■■■□□ 2.97
RHBDD3-202ENST00000406335 MBD5Q9P267 1494 aa33.62■■■□□ 2.97
RHBDD3-202ENST00000406335 ADGBQ8N7X0 1667 aa33.61■■■□□ 2.97
RHBDD3-202ENST00000406335 EHBP1L1Q8N3D4 1523 aa33.6■■■□□ 2.97
RHBDD3-202ENST00000406335 TIAM1Q13009 1591 aa33.6■■■□□ 2.97
RHBDD3-202ENST00000406335 A2ML1A8K2U0 1454 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms