RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
RPA3-204ENST00000406109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■■■□ 23.9
RPA3-204ENST00000406109 FANCAO15360 1455 aa10.51□□□□□ -0.73
RPA3-204ENST00000406109 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
RPA3-204ENST00000406109 ZMYM4Q5VZL5 1548 aa10.51□□□□□ -0.73
RPA3-204ENST00000406109 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
RPA3-204ENST00000406109 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
RPA3-204ENST00000406109 TTC37Q6PGP7 1564 aa10.49□□□□□ -0.73
RPA3-204ENST00000406109 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
RPA3-204ENST00000406109 POGZQ7Z3K3 1410 aa10.48□□□□□ -0.73
RPA3-204ENST00000406109 MAGI2Q86UL8 1455 aa10.48□□□□□ -0.73
RPA3-204ENST00000406109 ZFYVE16Q7Z3T8 1539 aa10.48□□□□□ -0.73
RPA3-204ENST00000406109 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
RPA3-204ENST00000406109 ILDR2Q71H61 639 aa10.47□□□□□ -0.73
RPA3-204ENST00000406109 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.73
RPA3-204ENST00000406109 MLECQ14165 292 aa10.46□□□□□ -0.73
RPA3-204ENST00000406109 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
RPA3-204ENST00000406109 CFAP74Q9C0B2 1584 aa10.46□□□□□ -0.74
RPA3-204ENST00000406109 FER1L4A9Z1Z3 1794 aa10.46□□□□□ -0.74
RPA3-204ENST00000406109 ARHGEF12Q9NZN5 1544 aa10.45□□□□□ -0.74
RPA3-204ENST00000406109 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
RPA3-204ENST00000406109 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
RPA3-204ENST00000406109 PLCH2O75038 1416 aa10.44□□□□□ -0.74
RPA3-204ENST00000406109 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
RPA3-204ENST00000406109 SETD1BQ9UPS6 1966 aaKnown RBP10.44□□□□□ -0.74
RPA3-204ENST00000406109 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
RPA3-204ENST00000406109 ATP10AO60312 1499 aa10.43□□□□□ -0.74
RPA3-204ENST00000406109 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
RPA3-204ENST00000406109 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
RPA3-204ENST00000406109 SOCS7O14512 581 aa10.4□□□□□ -0.74
RPA3-204ENST00000406109 DISP3Q9P2K9 1392 aa10.39□□□□□ -0.75
RPA3-204ENST00000406109 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
RPA3-204ENST00000406109 AFAP1Q8N556 730 aa10.38□□□□□ -0.75
RPA3-204ENST00000406109 KDM5CP41229 1560 aa10.37□□□□□ -0.75
RPA3-204ENST00000406109 EEA1Q15075 1411 aa10.37□□□□□ -0.75
RPA3-204ENST00000406109 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
RPA3-204ENST00000406109 KIF14Q15058 1648 aa10.36□□□□□ -0.75
RPA3-204ENST00000406109 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
RPA3-204ENST00000406109 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
RPA3-204ENST00000406109 DIP2CQ9Y2E4 1556 aa10.35□□□□□ -0.75
RPA3-204ENST00000406109 PTPRTO14522 1441 aa10.34□□□□□ -0.75
RPA3-204ENST00000406109 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
RPA3-204ENST00000406109 REREQ9P2R6 1566 aa10.33□□□□□ -0.76
RPA3-204ENST00000406109 C3P01024 1663 aa10.33□□□□□ -0.76
RPA3-204ENST00000406109 ABCA6Q8N139 1617 aa10.33□□□□□ -0.76
RPA3-204ENST00000406109 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
RPA3-204ENST00000406109 MLH3Q9UHC1 1453 aa10.32□□□□□ -0.76
RPA3-204ENST00000406109 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
RPA3-204ENST00000406109 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
RPA3-204ENST00000406109 LRRIQ1Q96JM4 1722 aa10.31□□□□□ -0.76
RPA3-204ENST00000406109 ARHGAP5Q13017 1502 aa10.31□□□□□ -0.76
RPA3-204ENST00000406109 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
RPA3-204ENST00000406109 TRAPPC8Q9Y2L5 1435 aa10.31□□□□□ -0.76
RPA3-204ENST00000406109 SPATA31D1Q6ZQQ2 1576 aa10.31□□□□□ -0.76
RPA3-204ENST00000406109 AGLP35573 1532 aa10.3□□□□□ -0.76
RPA3-204ENST00000406109 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
RPA3-204ENST00000406109 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
RPA3-204ENST00000406109 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
RPA3-204ENST00000406109 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
RPA3-204ENST00000406109 KIDINS220Q9ULH0 1771 aa10.28□□□□□ -0.76
RPA3-204ENST00000406109 IQSEC2Q5JU85 1478 aa10.28□□□□□ -0.76
RPA3-204ENST00000406109 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
RPA3-204ENST00000406109 ABCC1P33527 1531 aa10.27□□□□□ -0.77
RPA3-204ENST00000406109 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
RPA3-204ENST00000406109 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
RPA3-204ENST00000406109 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
RPA3-204ENST00000406109 UBTFP17480 764 aaKnown RBP10.25□□□□□ -0.77
RPA3-204ENST00000406109 CAMSAP1Q5T5Y3 1602 aa10.25□□□□□ -0.77
RPA3-204ENST00000406109 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
RPA3-204ENST00000406109 CLIP1P30622 1438 aa10.24□□□□□ -0.77
RPA3-204ENST00000406109 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
RPA3-204ENST00000406109 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
RPA3-204ENST00000406109 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
RPA3-204ENST00000406109 NPATQ14207 1427 aa10.24□□□□□ -0.77
RPA3-204ENST00000406109 CDC42BPAQ5VT25 1732 aa10.23□□□□□ -0.77
RPA3-204ENST00000406109 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
RPA3-204ENST00000406109 SAMD9LQ8IVG5 1584 aa10.22□□□□□ -0.77
RPA3-204ENST00000406109 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
RPA3-204ENST00000406109 ESF1Q9H501 851 aaKnown RBP10.22□□□□□ -0.77
RPA3-204ENST00000406109 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
RPA3-204ENST00000406109 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
RPA3-204ENST00000406109 PTPRKQ15262 1439 aa10.19□□□□□ -0.78
RPA3-204ENST00000406109 UBAP1LF5GYI3 381 aa10.19□□□□□ -0.78
RPA3-204ENST00000406109 HNRNPMP52272 730 aaKnown RBP eCLIP10.19□□□□□ -0.78
RPA3-204ENST00000406109 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
RPA3-204ENST00000406109 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
RPA3-204ENST00000406109 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
RPA3-204ENST00000406109 GPATCH8Q9UKJ3 1502 aaKnown RBP10.18□□□□□ -0.78
RPA3-204ENST00000406109 PLA2R1Q13018 1463 aa10.18□□□□□ -0.78
RPA3-204ENST00000406109 PKD2Q13563 968 aa10.18□□□□□ -0.78
RPA3-204ENST00000406109 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
RPA3-204ENST00000406109 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
RPA3-204ENST00000406109 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
RPA3-204ENST00000406109 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
RPA3-204ENST00000406109 SPAG9O60271 1321 aaKnown RBP10.17□□□□□ -0.78
RPA3-204ENST00000406109 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
RPA3-204ENST00000406109 MYO3AQ8NEV4 1616 aa10.17□□□□□ -0.78
RPA3-204ENST00000406109 CEP170BQ9Y4F5 1589 aaPredicted RBP10.17□□□□□ -0.78
RPA3-204ENST00000406109 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
RPA3-204ENST00000406109 INO80Q9ULG1 1556 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms