RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
RAPGEF3-204ENST00000405493 NPHP1O15259 732 aa15.44■□□□□ 0.06
RAPGEF3-204ENST00000405493 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
RAPGEF3-204ENST00000405493 ARXQ96QS3 562 aa15.43■□□□□ 0.06
RAPGEF3-204ENST00000405493 NESP48681 1621 aa15.42■□□□□ 0.06
RAPGEF3-204ENST00000405493 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
RAPGEF3-204ENST00000405493 STK26Q9P289 416 aa15.41■□□□□ 0.06
RAPGEF3-204ENST00000405493 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
RAPGEF3-204ENST00000405493 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
RAPGEF3-204ENST00000405493 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-204ENST00000405493 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-204ENST00000405493 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
RAPGEF3-204ENST00000405493 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
RAPGEF3-204ENST00000405493 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
RAPGEF3-204ENST00000405493 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF3-204ENST00000405493 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
RAPGEF3-204ENST00000405493 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAPGEF3-204ENST00000405493 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
RAPGEF3-204ENST00000405493 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
RAPGEF3-204ENST00000405493 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF3-204ENST00000405493 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-204ENST00000405493 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAPGEF3-204ENST00000405493 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
RAPGEF3-204ENST00000405493 KANK4Q5T7N3 995 aaPredicted RBP15.33■□□□□ 0.05
RAPGEF3-204ENST00000405493 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
RAPGEF3-204ENST00000405493 GLIPR1L2Q4G1C9 344 aa15.32■□□□□ 0.04
RAPGEF3-204ENST00000405493 NGDNQ8NEJ9 315 aaKnown RBP15.31■□□□□ 0.04
RAPGEF3-204ENST00000405493 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
RAPGEF3-204ENST00000405493 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
RAPGEF3-204ENST00000405493 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
RAPGEF3-204ENST00000405493 POGZQ7Z3K3 1410 aa15.29■□□□□ 0.04
RAPGEF3-204ENST00000405493 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
RAPGEF3-204ENST00000405493 SNAPC4Q5SXM2 1469 aa15.29■□□□□ 0.04
RAPGEF3-204ENST00000405493 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-204ENST00000405493 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
RAPGEF3-204ENST00000405493 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-204ENST00000405493 SOX12O15370 315 aa15.26■□□□□ 0.03
RAPGEF3-204ENST00000405493 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF3-204ENST00000405493 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
RAPGEF3-204ENST00000405493 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-204ENST00000405493 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-204ENST00000405493 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF3-204ENST00000405493 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
RAPGEF3-204ENST00000405493 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
RAPGEF3-204ENST00000405493 MS4A1P11836 297 aa15.22■□□□□ 0.03
RAPGEF3-204ENST00000405493 PLEKHH2Q8IVE3 1493 aa15.21■□□□□ 0.03
RAPGEF3-204ENST00000405493 TMX4Q9H1E5 349 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-204ENST00000405493 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.02
RAPGEF3-204ENST00000405493 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.02
RAPGEF3-204ENST00000405493 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.02
RAPGEF3-204ENST00000405493 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-204ENST00000405493 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-204ENST00000405493 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
RAPGEF3-204ENST00000405493 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-204ENST00000405493 ATF3P18847 181 aa15.19■□□□□ 0.02
RAPGEF3-204ENST00000405493 CUX1P39880 1505 aa15.18■□□□□ 0.02
RAPGEF3-204ENST00000405493 PRDM2Q13029 1718 aa15.18■□□□□ 0.02
RAPGEF3-204ENST00000405493 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-204ENST00000405493 DDRGK1Q96HY6 314 aa15.18■□□□□ 0.02
RAPGEF3-204ENST00000405493 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
RAPGEF3-204ENST00000405493 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
RAPGEF3-204ENST00000405493 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF3-204ENST00000405493 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-204ENST00000405493 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF3-204ENST00000405493 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
RAPGEF3-204ENST00000405493 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
RAPGEF3-204ENST00000405493 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
RAPGEF3-204ENST00000405493 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
RAPGEF3-204ENST00000405493 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
RAPGEF3-204ENST00000405493 FOXD1Q16676 465 aa15.14■□□□□ 0.01
RAPGEF3-204ENST00000405493 AMPHP49418 695 aa15.14■□□□□ 0.01
RAPGEF3-204ENST00000405493 BECN1Q14457 450 aa15.14■□□□□ 0.01
RAPGEF3-204ENST00000405493 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
RAPGEF3-204ENST00000405493 EVA1CP58658 441 aa15.13■□□□□ 0.01
RAPGEF3-204ENST00000405493 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
RAPGEF3-204ENST00000405493 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
RAPGEF3-204ENST00000405493 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
RAPGEF3-204ENST00000405493 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
RAPGEF3-204ENST00000405493 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
RAPGEF3-204ENST00000405493 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
RAPGEF3-204ENST00000405493 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-204ENST00000405493 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
RAPGEF3-204ENST00000405493 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
RAPGEF3-204ENST00000405493 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
RAPGEF3-204ENST00000405493 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
RAPGEF3-204ENST00000405493 DEKP35659 375 aaKnown RBP15.08■□□□□ 0
RAPGEF3-204ENST00000405493 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
RAPGEF3-204ENST00000405493 PSME1Q06323 249 aa15.07■□□□□ 0
RAPGEF3-204ENST00000405493 AFAP1Q8N556 730 aa15.07■□□□□ 0
RAPGEF3-204ENST00000405493 HDAC5Q9UQL6 1122 aa15.07■□□□□ 0
RAPGEF3-204ENST00000405493 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
RAPGEF3-204ENST00000405493 CASC1Q6TDU7 716 aa15.07■□□□□ 0
RAPGEF3-204ENST00000405493 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
RAPGEF3-204ENST00000405493 LMOD3Q0VAK6 560 aa15.05■□□□□ 0
RAPGEF3-204ENST00000405493 B4GALNT3Q6L9W6 998 aa15.05■□□□□ -0
RAPGEF3-204ENST00000405493 TXNDC2Q86VQ3 553 aa15.05■□□□□ -0
RAPGEF3-204ENST00000405493 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
RAPGEF3-204ENST00000405493 NUTM2FA1L443 756 aa15.05■□□□□ -0
RAPGEF3-204ENST00000405493 HSPA5P11021 654 aaKnown RBP15.05■□□□□ -0
RAPGEF3-204ENST00000405493 COG3Q96JB2 828 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms