RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 ABCC5O15440 1437 aa22■■□□□ 1.11
TOM1-203ENST00000404284 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
TOM1-203ENST00000404284 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
TOM1-203ENST00000404284 FKBP8Q14318 412 aa21.95■■□□□ 1.1
TOM1-203ENST00000404284 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
TOM1-203ENST00000404284 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
TOM1-203ENST00000404284 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
TOM1-203ENST00000404284 FOXD1Q16676 465 aa21.93■■□□□ 1.1
TOM1-203ENST00000404284 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
TOM1-203ENST00000404284 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
TOM1-203ENST00000404284 EIF4G2P78344 907 aaKnown RBP eCLIP21.91■■□□□ 1.1
TOM1-203ENST00000404284 BCANQ96GW7 911 aa21.91■■□□□ 1.1
TOM1-203ENST00000404284 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
TOM1-203ENST00000404284 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
TOM1-203ENST00000404284 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
TOM1-203ENST00000404284 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
TOM1-203ENST00000404284 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
TOM1-203ENST00000404284 ITSN2Q9NZM3 1697 aa21.88■■□□□ 1.09
TOM1-203ENST00000404284 CAMSAP2Q08AD1 1489 aa21.87■■□□□ 1.09
TOM1-203ENST00000404284 CNTLNQ9NXG0 1405 aa21.87■■□□□ 1.09
TOM1-203ENST00000404284 ADCY10Q96PN6 1610 aa21.86■■□□□ 1.09
TOM1-203ENST00000404284 NCOA1Q15788 1441 aa21.86■■□□□ 1.09
TOM1-203ENST00000404284 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
TOM1-203ENST00000404284 ADGBQ8N7X0 1667 aa21.84■■□□□ 1.09
TOM1-203ENST00000404284 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
TOM1-203ENST00000404284 KIF14Q15058 1648 aa21.84■■□□□ 1.09
TOM1-203ENST00000404284 NEFLP07196 543 aa21.84■■□□□ 1.09
TOM1-203ENST00000404284 PZPP20742 1482 aa21.83■■□□□ 1.09
TOM1-203ENST00000404284 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.08
TOM1-203ENST00000404284 GPATCH8Q9UKJ3 1502 aaKnown RBP21.83■■□□□ 1.08
TOM1-203ENST00000404284 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
TOM1-203ENST00000404284 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
TOM1-203ENST00000404284 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
TOM1-203ENST00000404284 C11orf95C9JLR9 678 aaPredicted RBP21.8■■□□□ 1.08
TOM1-203ENST00000404284 ADGRL2O95490 1459 aa21.8■■□□□ 1.08
TOM1-203ENST00000404284 SPATA31E1Q6ZUB1 1445 aa21.79■■□□□ 1.08
TOM1-203ENST00000404284 POLR1AO95602 1720 aaPredicted RBP21.78■■□□□ 1.08
TOM1-203ENST00000404284 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
TOM1-203ENST00000404284 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
TOM1-203ENST00000404284 NUP160Q12769 1436 aa21.78■■□□□ 1.08
TOM1-203ENST00000404284 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
TOM1-203ENST00000404284 HNRNPUQ00839 825 aaKnown RBP eCLIP21.77■■□□□ 1.08
TOM1-203ENST00000404284 CARMIL2Q6F5E8 1435 aa21.74■■□□□ 1.07
TOM1-203ENST00000404284 MBD5Q9P267 1494 aa21.74■■□□□ 1.07
TOM1-203ENST00000404284 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
TOM1-203ENST00000404284 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
TOM1-203ENST00000404284 PRKRIP1Q9H875 184 aaPredicted RBP21.71■■□□□ 1.07
TOM1-203ENST00000404284 ABCA8O94911 1581 aa21.7■■□□□ 1.07
TOM1-203ENST00000404284 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.06
TOM1-203ENST00000404284 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
TOM1-203ENST00000404284 KIF7Q2M1P5 1343 aa21.7■■□□□ 1.06
TOM1-203ENST00000404284 ZNF777Q9ULD5 760 aaPredicted RBP21.68■■□□□ 1.06
TOM1-203ENST00000404284 ANKRD30AQ9BXX3 1397 aa21.68■■□□□ 1.06
TOM1-203ENST00000404284 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
TOM1-203ENST00000404284 FBLN2P98095 1184 aa21.67■■□□□ 1.06
TOM1-203ENST00000404284 SHANK2Q9UPX8 1470 aa21.65■■□□□ 1.06
TOM1-203ENST00000404284 ANKRD50Q9ULJ7 1429 aa21.65■■□□□ 1.06
TOM1-203ENST00000404284 ATP10BO94823 1461 aa21.63■■□□□ 1.05
TOM1-203ENST00000404284 PKD2Q13563 968 aa21.61■■□□□ 1.05
TOM1-203ENST00000404284 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
TOM1-203ENST00000404284 C9orf84Q5VXU9 1444 aa21.6■■□□□ 1.05
TOM1-203ENST00000404284 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
TOM1-203ENST00000404284 KDM5DQ9BY66 1539 aa21.59■■□□□ 1.05
TOM1-203ENST00000404284 KDM5CP41229 1560 aa21.59■■□□□ 1.05
TOM1-203ENST00000404284 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
TOM1-203ENST00000404284 USP47Q96K76 1375 aa21.58■■□□□ 1.04
TOM1-203ENST00000404284 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
TOM1-203ENST00000404284 DHX29Q7Z478 1369 aaKnown RBP21.56■■□□□ 1.04
TOM1-203ENST00000404284 UHRF1BP1Q6BDS2 1440 aa21.56■■□□□ 1.04
TOM1-203ENST00000404284 FAM9BQ8IZU0 186 aa21.55■■□□□ 1.04
TOM1-203ENST00000404284 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
TOM1-203ENST00000404284 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
TOM1-203ENST00000404284 ARHGEF5Q12774 1597 aa21.54■■□□□ 1.04
TOM1-203ENST00000404284 NUP155O75694 1391 aa21.53■■□□□ 1.04
TOM1-203ENST00000404284 RALGAPBQ86X10 1494 aa21.53■■□□□ 1.04
TOM1-203ENST00000404284 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
TOM1-203ENST00000404284 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
TOM1-203ENST00000404284 PTPRGP23470 1445 aa21.51■■□□□ 1.03
TOM1-203ENST00000404284 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
TOM1-203ENST00000404284 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
TOM1-203ENST00000404284 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
TOM1-203ENST00000404284 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
TOM1-203ENST00000404284 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
TOM1-203ENST00000404284 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
TOM1-203ENST00000404284 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
TOM1-203ENST00000404284 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
TOM1-203ENST00000404284 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
TOM1-203ENST00000404284 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
TOM1-203ENST00000404284 CCDC141Q6ZP82 1450 aa21.44■■□□□ 1.02
TOM1-203ENST00000404284 MSH5O43196 834 aa21.41■■□□□ 1.02
TOM1-203ENST00000404284 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
TOM1-203ENST00000404284 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
TOM1-203ENST00000404284 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.01
TOM1-203ENST00000404284 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.01
TOM1-203ENST00000404284 PPP4R2Q9NY27 417 aa21.39■■□□□ 1.01
TOM1-203ENST00000404284 SYCP2Q9BX26 1530 aa21.35■■□□□ 1.01
TOM1-203ENST00000404284 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
TOM1-203ENST00000404284 MAST1Q9Y2H9 1570 aa21.35■■□□□ 1.01
TOM1-203ENST00000404284 CHD1O14646 1710 aa21.35■■□□□ 1.01
TOM1-203ENST00000404284 E9PCH4 1651 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms