RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
PSME4-202ENST00000404125 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
PSME4-202ENST00000404125 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
PSME4-202ENST00000404125 NUP155O75694 1391 aa17.79■□□□□ 0.44
PSME4-202ENST00000404125 ISY1Q9ULR0 285 aaKnown RBP17.79■□□□□ 0.44
PSME4-202ENST00000404125 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
PSME4-202ENST00000404125 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
PSME4-202ENST00000404125 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.44
PSME4-202ENST00000404125 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
PSME4-202ENST00000404125 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
PSME4-202ENST00000404125 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
PSME4-202ENST00000404125 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
PSME4-202ENST00000404125 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
PSME4-202ENST00000404125 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
PSME4-202ENST00000404125 PLCB2Q00722 1185 aa17.73■□□□□ 0.43
PSME4-202ENST00000404125 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.43
PSME4-202ENST00000404125 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
PSME4-202ENST00000404125 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.432e-8■■■□□ 18.8
PSME4-202ENST00000404125 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
PSME4-202ENST00000404125 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
PSME4-202ENST00000404125 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
PSME4-202ENST00000404125 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
PSME4-202ENST00000404125 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
PSME4-202ENST00000404125 SETD5Q9C0A6 1442 aa17.69■□□□□ 0.42
PSME4-202ENST00000404125 KCNJ4P48050 445 aa17.69■□□□□ 0.42
PSME4-202ENST00000404125 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
PSME4-202ENST00000404125 ZNF428Q96B54 188 aa17.68■□□□□ 0.42
PSME4-202ENST00000404125 FGD1P98174 961 aa17.67■□□□□ 0.42
PSME4-202ENST00000404125 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
PSME4-202ENST00000404125 NGEFQ8N5V2 710 aa17.67■□□□□ 0.42
PSME4-202ENST00000404125 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
PSME4-202ENST00000404125 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
PSME4-202ENST00000404125 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
PSME4-202ENST00000404125 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
PSME4-202ENST00000404125 SPAG9O60271 1321 aaKnown RBP17.64■□□□□ 0.41
PSME4-202ENST00000404125 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
PSME4-202ENST00000404125 ELL2O00472 640 aaPredicted RBP17.64■□□□□ 0.41
PSME4-202ENST00000404125 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
PSME4-202ENST00000404125 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
PSME4-202ENST00000404125 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
PSME4-202ENST00000404125 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
PSME4-202ENST00000404125 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
PSME4-202ENST00000404125 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
PSME4-202ENST00000404125 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
PSME4-202ENST00000404125 HDGFP51858 240 aaKnown RBP17.59■□□□□ 0.41
PSME4-202ENST00000404125 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
PSME4-202ENST00000404125 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
PSME4-202ENST00000404125 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
PSME4-202ENST00000404125 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
PSME4-202ENST00000404125 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
PSME4-202ENST00000404125 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
PSME4-202ENST00000404125 CLSTN1O94985 981 aa17.58■□□□□ 0.41
PSME4-202ENST00000404125 FANCD2Q9BXW9 1451 aa17.58■□□□□ 0.41
PSME4-202ENST00000404125 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
PSME4-202ENST00000404125 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
PSME4-202ENST00000404125 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
PSME4-202ENST00000404125 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
PSME4-202ENST00000404125 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
PSME4-202ENST00000404125 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
PSME4-202ENST00000404125 MSH5O43196 834 aa17.56■□□□□ 0.4
PSME4-202ENST00000404125 AMPHP49418 695 aa17.55■□□□□ 0.4
PSME4-202ENST00000404125 BECN1Q14457 450 aa17.55■□□□□ 0.4
PSME4-202ENST00000404125 EID1Q9Y6B2 187 aa17.55■□□□□ 0.4
PSME4-202ENST00000404125 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
PSME4-202ENST00000404125 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
PSME4-202ENST00000404125 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.48e-7■■■■□ 20.2
PSME4-202ENST00000404125 PLIN1O60240 522 aa17.52■□□□□ 0.4
PSME4-202ENST00000404125 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.39
PSME4-202ENST00000404125 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
PSME4-202ENST00000404125 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
PSME4-202ENST00000404125 EVA1CP58658 441 aa17.5■□□□□ 0.39
PSME4-202ENST00000404125 KTN1Q86UP2 1357 aaKnown RBP17.49■□□□□ 0.39
PSME4-202ENST00000404125 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
PSME4-202ENST00000404125 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
PSME4-202ENST00000404125 PTMAP06454 111 aaKnown RBP17.49■□□□□ 0.39
PSME4-202ENST00000404125 NESP48681 1621 aa17.48■□□□□ 0.39
PSME4-202ENST00000404125 ZRSR1Q15695 479 aaKnown RBP17.47■□□□□ 0.39
PSME4-202ENST00000404125 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
PSME4-202ENST00000404125 PANK3Q9H999 370 aa17.47■□□□□ 0.39
PSME4-202ENST00000404125 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
PSME4-202ENST00000404125 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
PSME4-202ENST00000404125 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
PSME4-202ENST00000404125 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
PSME4-202ENST00000404125 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
PSME4-202ENST00000404125 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
PSME4-202ENST00000404125 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
PSME4-202ENST00000404125 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
PSME4-202ENST00000404125 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
PSME4-202ENST00000404125 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
PSME4-202ENST00000404125 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
PSME4-202ENST00000404125 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
PSME4-202ENST00000404125 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
PSME4-202ENST00000404125 TRIM44Q96DX7 344 aaPredicted RBP17.43■□□□□ 0.38
PSME4-202ENST00000404125 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
PSME4-202ENST00000404125 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
PSME4-202ENST00000404125 PTPRGP23470 1445 aa17.42■□□□□ 0.38
PSME4-202ENST00000404125 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
PSME4-202ENST00000404125 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
PSME4-202ENST00000404125 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
PSME4-202ENST00000404125 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms