RNA–Protein interactions for RNA: ENST00000403714.7

EFR3B-204, Transcript of EFR3 homolog B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EFR3B, Length 7,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-204ENST00000403714 NGEFQ8N5V2 710 aa13.89□□□□□ -0.19
EFR3B-204ENST00000403714 RGS3P49796 1198 aa13.88□□□□□ -0.19
EFR3B-204ENST00000403714 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
EFR3B-204ENST00000403714 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
EFR3B-204ENST00000403714 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
EFR3B-204ENST00000403714 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
EFR3B-204ENST00000403714 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
EFR3B-204ENST00000403714 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
EFR3B-204ENST00000403714 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
EFR3B-204ENST00000403714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
EFR3B-204ENST00000403714 KIF3BO15066 747 aa13.85□□□□□ -0.19
EFR3B-204ENST00000403714 AMPHP49418 695 aa13.85□□□□□ -0.19
EFR3B-204ENST00000403714 ERICH6BQ5W0A0 696 aa13.84□□□□□ -0.19
EFR3B-204ENST00000403714 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
EFR3B-204ENST00000403714 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
EFR3B-204ENST00000403714 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
EFR3B-204ENST00000403714 DNTTIP2Q5QJE6 756 aaKnown RBP13.83□□□□□ -0.2
EFR3B-204ENST00000403714 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
EFR3B-204ENST00000403714 FOXD1Q16676 465 aa13.82□□□□□ -0.2
EFR3B-204ENST00000403714 CLIP1P30622 1438 aa13.82□□□□□ -0.2
EFR3B-204ENST00000403714 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
EFR3B-204ENST00000403714 GOLGA6L22H0YM25 854 aa13.82□□□□□ -0.2
EFR3B-204ENST00000403714 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
EFR3B-204ENST00000403714 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
EFR3B-204ENST00000403714 BECN1Q14457 450 aa13.8□□□□□ -0.2
EFR3B-204ENST00000403714 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
EFR3B-204ENST00000403714 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
EFR3B-204ENST00000403714 CTDP1Q9Y5B0 961 aaPredicted RBP13.79□□□□□ -0.2
EFR3B-204ENST00000403714 TMF1P82094 1093 aa13.79□□□□□ -0.2
EFR3B-204ENST00000403714 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
EFR3B-204ENST00000403714 SIN3AQ96ST3 1273 aa13.78□□□□□ -0.2
EFR3B-204ENST00000403714 SLC4A10Q6U841 1118 aa13.78□□□□□ -0.2
EFR3B-204ENST00000403714 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
EFR3B-204ENST00000403714 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
EFR3B-204ENST00000403714 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
EFR3B-204ENST00000403714 MARCH6O60337 910 aa13.76□□□□□ -0.21
EFR3B-204ENST00000403714 TRIM44Q96DX7 344 aaPredicted RBP13.76□□□□□ -0.21
EFR3B-204ENST00000403714 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
EFR3B-204ENST00000403714 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
EFR3B-204ENST00000403714 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
EFR3B-204ENST00000403714 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
EFR3B-204ENST00000403714 RASSF8Q8NHQ8 419 aa13.74□□□□□ -0.21
EFR3B-204ENST00000403714 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
EFR3B-204ENST00000403714 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
EFR3B-204ENST00000403714 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
EFR3B-204ENST00000403714 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
EFR3B-204ENST00000403714 PSME1Q06323 249 aa13.71□□□□□ -0.21
EFR3B-204ENST00000403714 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
EFR3B-204ENST00000403714 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
EFR3B-204ENST00000403714 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
EFR3B-204ENST00000403714 ATF3P18847 181 aa13.7□□□□□ -0.22
EFR3B-204ENST00000403714 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
EFR3B-204ENST00000403714 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
EFR3B-204ENST00000403714 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
EFR3B-204ENST00000403714 NUTM2GQ5VZR2 741 aa13.69□□□□□ -0.22
EFR3B-204ENST00000403714 TRAK1Q9UPV9 953 aa13.69□□□□□ -0.22
EFR3B-204ENST00000403714 GLIPR1L2Q4G1C9 344 aa13.69□□□□□ -0.22
EFR3B-204ENST00000403714 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
EFR3B-204ENST00000403714 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
EFR3B-204ENST00000403714 PKD2Q13563 968 aa13.68□□□□□ -0.22
EFR3B-204ENST00000403714 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
EFR3B-204ENST00000403714 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
EFR3B-204ENST00000403714 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
EFR3B-204ENST00000403714 DRC7Q8IY82 874 aa13.67□□□□□ -0.22
EFR3B-204ENST00000403714 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
EFR3B-204ENST00000403714 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
EFR3B-204ENST00000403714 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
EFR3B-204ENST00000403714 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
EFR3B-204ENST00000403714 NOL8Q76FK4 1167 aaKnown RBP13.65□□□□□ -0.22
EFR3B-204ENST00000403714 VPS37DQ86XT2 251 aa13.65□□□□□ -0.22
EFR3B-204ENST00000403714 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
EFR3B-204ENST00000403714 MCCP23508 829 aa13.65□□□□□ -0.22
EFR3B-204ENST00000403714 KIAA2012Q0VF49 1180 aa13.64□□□□□ -0.23
EFR3B-204ENST00000403714 CUX2O14529 1486 aa13.64□□□□□ -0.23
EFR3B-204ENST00000403714 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
EFR3B-204ENST00000403714 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
EFR3B-204ENST00000403714 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
EFR3B-204ENST00000403714 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
EFR3B-204ENST00000403714 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
EFR3B-204ENST00000403714 EIF2S2P20042 333 aaKnown RBP13.63□□□□□ -0.23
EFR3B-204ENST00000403714 MIER1Q8N108 512 aa13.63□□□□□ -0.23
EFR3B-204ENST00000403714 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
EFR3B-204ENST00000403714 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
EFR3B-204ENST00000403714 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
EFR3B-204ENST00000403714 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
EFR3B-204ENST00000403714 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
EFR3B-204ENST00000403714 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
EFR3B-204ENST00000403714 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
EFR3B-204ENST00000403714 ELL2O00472 640 aaPredicted RBP13.6□□□□□ -0.23
EFR3B-204ENST00000403714 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
EFR3B-204ENST00000403714 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
EFR3B-204ENST00000403714 MTMR7Q9Y216 660 aa13.6□□□□□ -0.23
EFR3B-204ENST00000403714 FYB1O15117 783 aa13.59□□□□□ -0.23
EFR3B-204ENST00000403714 IBSPP21815 317 aaPredicted RBP13.59□□□□□ -0.23
EFR3B-204ENST00000403714 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
EFR3B-204ENST00000403714 MS4A1P11836 297 aa13.58□□□□□ -0.23
EFR3B-204ENST00000403714 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
EFR3B-204ENST00000403714 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.24
EFR3B-204ENST00000403714 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
EFR3B-204ENST00000403714 GPATCH3Q96I76 525 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms