RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 NAIPQ13075 1403 aa19.65■□□□□ 0.74
CEACAM1-206ENST00000403136 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
CEACAM1-206ENST00000403136 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
CEACAM1-206ENST00000403136 CDC42BPAQ5VT25 1732 aa19.63■□□□□ 0.73
CEACAM1-206ENST00000403136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
CEACAM1-206ENST00000403136 ROCK1Q13464 1354 aa19.61■□□□□ 0.73
CEACAM1-206ENST00000403136 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
CEACAM1-206ENST00000403136 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
CEACAM1-206ENST00000403136 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.73
CEACAM1-206ENST00000403136 HNRNPMP52272 730 aaKnown RBP eCLIP19.57■□□□□ 0.72
CEACAM1-206ENST00000403136 TTC37Q6PGP7 1564 aa19.57■□□□□ 0.72
CEACAM1-206ENST00000403136 PLCH2O75038 1416 aa19.56■□□□□ 0.72
CEACAM1-206ENST00000403136 RSPH4AQ5TD94 716 aa19.56■□□□□ 0.72
CEACAM1-206ENST00000403136 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
CEACAM1-206ENST00000403136 PREX2Q70Z35 1606 aa19.55■□□□□ 0.72
CEACAM1-206ENST00000403136 TSPY4P0CV99 314 aa19.55■□□□□ 0.72
CEACAM1-206ENST00000403136 TSPY10P0CW01 314 aa19.55■□□□□ 0.72
CEACAM1-206ENST00000403136 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
CEACAM1-206ENST00000403136 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
CEACAM1-206ENST00000403136 CDC42BPBQ9Y5S2 1711 aa19.54■□□□□ 0.72
CEACAM1-206ENST00000403136 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
CEACAM1-206ENST00000403136 MBD5Q9P267 1494 aa19.53■□□□□ 0.72
CEACAM1-206ENST00000403136 NCOA1Q15788 1441 aa19.52■□□□□ 0.72
CEACAM1-206ENST00000403136 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
CEACAM1-206ENST00000403136 SAMD9LQ8IVG5 1584 aa19.5■□□□□ 0.71
CEACAM1-206ENST00000403136 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
CEACAM1-206ENST00000403136 KIAA1107Q9UPP5 1409 aa19.49■□□□□ 0.71
CEACAM1-206ENST00000403136 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
CEACAM1-206ENST00000403136 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
CEACAM1-206ENST00000403136 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
CEACAM1-206ENST00000403136 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
CEACAM1-206ENST00000403136 ARHGEF5Q12774 1597 aa19.48■□□□□ 0.71
CEACAM1-206ENST00000403136 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
CEACAM1-206ENST00000403136 CCDC141Q6ZP82 1450 aa19.45■□□□□ 0.7
CEACAM1-206ENST00000403136 ARAP3Q8WWN8 1544 aa19.45■□□□□ 0.7
CEACAM1-206ENST00000403136 KDM6BO15054 1643 aa19.44■□□□□ 0.7
CEACAM1-206ENST00000403136 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
CEACAM1-206ENST00000403136 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
CEACAM1-206ENST00000403136 SYCP2Q9BX26 1530 aa19.42■□□□□ 0.7
CEACAM1-206ENST00000403136 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
CEACAM1-206ENST00000403136 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
CEACAM1-206ENST00000403136 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.7
CEACAM1-206ENST00000403136 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.7
CEACAM1-206ENST00000403136 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
CEACAM1-206ENST00000403136 FANCAO15360 1455 aa19.37■□□□□ 0.69
CEACAM1-206ENST00000403136 KIF15Q9NS87 1388 aa19.37■□□□□ 0.69
CEACAM1-206ENST00000403136 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
CEACAM1-206ENST00000403136 ABCC1P33527 1531 aa19.36■□□□□ 0.69
CEACAM1-206ENST00000403136 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
CEACAM1-206ENST00000403136 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
CEACAM1-206ENST00000403136 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
CEACAM1-206ENST00000403136 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
CEACAM1-206ENST00000403136 TIMELESSQ9UNS1 1208 aa19.34■□□□□ 0.69
CEACAM1-206ENST00000403136 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
CEACAM1-206ENST00000403136 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
CEACAM1-206ENST00000403136 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
CEACAM1-206ENST00000403136 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
CEACAM1-206ENST00000403136 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
CEACAM1-206ENST00000403136 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
CEACAM1-206ENST00000403136 FOXD1Q16676 465 aa19.26■□□□□ 0.67
CEACAM1-206ENST00000403136 NUP155O75694 1391 aa19.26■□□□□ 0.67
CEACAM1-206ENST00000403136 PZPP20742 1482 aa19.25■□□□□ 0.67
CEACAM1-206ENST00000403136 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
CEACAM1-206ENST00000403136 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
CEACAM1-206ENST00000403136 ANKRD30BQ9BXX2 1392 aa19.22■□□□□ 0.67
CEACAM1-206ENST00000403136 DUOX2Q9NRD8 1548 aa19.22■□□□□ 0.67
CEACAM1-206ENST00000403136 PKD2Q13563 968 aa19.21■□□□□ 0.67
CEACAM1-206ENST00000403136 GLI2P10070 1586 aa19.21■□□□□ 0.67
CEACAM1-206ENST00000403136 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
CEACAM1-206ENST00000403136 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
CEACAM1-206ENST00000403136 NEO1Q92859 1461 aa19.2■□□□□ 0.66
CEACAM1-206ENST00000403136 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
CEACAM1-206ENST00000403136 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
CEACAM1-206ENST00000403136 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
CEACAM1-206ENST00000403136 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
CEACAM1-206ENST00000403136 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
CEACAM1-206ENST00000403136 ZFYVE16Q7Z3T8 1539 aa19.17■□□□□ 0.66
CEACAM1-206ENST00000403136 ZNF518AQ6AHZ1 1483 aa19.17■□□□□ 0.66
CEACAM1-206ENST00000403136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■■□□□ 12
CEACAM1-206ENST00000403136 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
CEACAM1-206ENST00000403136 MAP3K4Q9Y6R4 1608 aa19.15■□□□□ 0.66
CEACAM1-206ENST00000403136 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
CEACAM1-206ENST00000403136 INO80Q9ULG1 1556 aaPredicted RBP19.13■□□□□ 0.65
CEACAM1-206ENST00000403136 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
CEACAM1-206ENST00000403136 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
CEACAM1-206ENST00000403136 RAPGEF3O95398 923 aa19.11■□□□□ 0.65
CEACAM1-206ENST00000403136 UNC13BO14795 1591 aa19.1■□□□□ 0.65
CEACAM1-206ENST00000403136 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
CEACAM1-206ENST00000403136 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
CEACAM1-206ENST00000403136 RPRD2Q5VT52 1461 aaKnown RBP19.09■□□□□ 0.65
CEACAM1-206ENST00000403136 KDM5CP41229 1560 aa19.08■□□□□ 0.64
CEACAM1-206ENST00000403136 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.64
CEACAM1-206ENST00000403136 KIF3BO15066 747 aa19.07■□□□□ 0.64
CEACAM1-206ENST00000403136 MAGI2Q86UL8 1455 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms