RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
ATG3-202ENST00000402314 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
ATG3-202ENST00000402314 NUP153P49790 1475 aaKnown RBP19.65■□□□□ 0.74
ATG3-202ENST00000402314 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.74
ATG3-202ENST00000402314 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
ATG3-202ENST00000402314 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
ATG3-202ENST00000402314 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
ATG3-202ENST00000402314 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
ATG3-202ENST00000402314 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
ATG3-202ENST00000402314 ABCC5O15440 1437 aa19.6■□□□□ 0.73
ATG3-202ENST00000402314 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
ATG3-202ENST00000402314 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
ATG3-202ENST00000402314 DAPK1P53355 1430 aa19.59■□□□□ 0.73
ATG3-202ENST00000402314 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
ATG3-202ENST00000402314 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
ATG3-202ENST00000402314 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATG3-202ENST00000402314 C11orf95C9JLR9 678 aaPredicted RBP19.58■□□□□ 0.72
ATG3-202ENST00000402314 NBPF8Q3BBV2 869 aa19.57■□□□□ 0.72
ATG3-202ENST00000402314 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
ATG3-202ENST00000402314 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
ATG3-202ENST00000402314 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
ATG3-202ENST00000402314 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATG3-202ENST00000402314 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
ATG3-202ENST00000402314 RAPGEF6Q8TEU7 1601 aa19.52■□□□□ 0.72
ATG3-202ENST00000402314 AKNAQ7Z591 1439 aa19.52■□□□□ 0.71
ATG3-202ENST00000402314 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
ATG3-202ENST00000402314 CCDC184Q52MB2 194 aa19.51■□□□□ 0.71
ATG3-202ENST00000402314 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
ATG3-202ENST00000402314 ANKRD30BQ9BXX2 1392 aa19.51■□□□□ 0.71
ATG3-202ENST00000402314 NBR1Q14596 966 aa19.51■□□□□ 0.71
ATG3-202ENST00000402314 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
ATG3-202ENST00000402314 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
ATG3-202ENST00000402314 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
ATG3-202ENST00000402314 ROCK1Q13464 1354 aa19.46■□□□□ 0.71
ATG3-202ENST00000402314 KIF14Q15058 1648 aa19.46■□□□□ 0.71
ATG3-202ENST00000402314 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
ATG3-202ENST00000402314 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
ATG3-202ENST00000402314 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
ATG3-202ENST00000402314 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
ATG3-202ENST00000402314 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
ATG3-202ENST00000402314 B4GALNT3Q6L9W6 998 aa19.44■□□□□ 0.7
ATG3-202ENST00000402314 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
ATG3-202ENST00000402314 PKD2Q13563 968 aa19.43■□□□□ 0.7
ATG3-202ENST00000402314 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
ATG3-202ENST00000402314 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
ATG3-202ENST00000402314 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
ATG3-202ENST00000402314 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
ATG3-202ENST00000402314 PZPP20742 1482 aa19.39■□□□□ 0.69
ATG3-202ENST00000402314 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATG3-202ENST00000402314 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
ATG3-202ENST00000402314 CCDC7Q96M83 1385 aa19.38■□□□□ 0.69
ATG3-202ENST00000402314 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
ATG3-202ENST00000402314 NUP160Q12769 1436 aa19.36■□□□□ 0.69
ATG3-202ENST00000402314 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
ATG3-202ENST00000402314 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
ATG3-202ENST00000402314 ATP10BO94823 1461 aa19.34■□□□□ 0.69
ATG3-202ENST00000402314 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
ATG3-202ENST00000402314 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
ATG3-202ENST00000402314 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.68
ATG3-202ENST00000402314 MRS2Q9HD23 443 aa19.32■□□□□ 0.68
ATG3-202ENST00000402314 NUP155O75694 1391 aa19.32■□□□□ 0.68
ATG3-202ENST00000402314 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
ATG3-202ENST00000402314 ANKRD50Q9ULJ7 1429 aa19.31■□□□□ 0.68
ATG3-202ENST00000402314 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
ATG3-202ENST00000402314 TSPY4P0CV99 314 aa19.29■□□□□ 0.68
ATG3-202ENST00000402314 TSPY10P0CW01 314 aa19.29■□□□□ 0.68
ATG3-202ENST00000402314 PRKCSHP14314 528 aaPredicted RBP19.29■□□□□ 0.68
ATG3-202ENST00000402314 KIAA1107Q9UPP5 1409 aa19.28■□□□□ 0.68
ATG3-202ENST00000402314 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
ATG3-202ENST00000402314 PTPRGP23470 1445 aa19.26■□□□□ 0.67
ATG3-202ENST00000402314 C9orf84Q5VXU9 1444 aa19.26■□□□□ 0.67
ATG3-202ENST00000402314 ANO8Q9HCE9 1232 aaPredicted RBP19.25■□□□□ 0.67
ATG3-202ENST00000402314 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
ATG3-202ENST00000402314 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
ATG3-202ENST00000402314 USP47Q96K76 1375 aa19.23■□□□□ 0.67
ATG3-202ENST00000402314 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
ATG3-202ENST00000402314 ABCA8O94911 1581 aa19.23■□□□□ 0.67
ATG3-202ENST00000402314 PPP4R2Q9NY27 417 aa19.23■□□□□ 0.67
ATG3-202ENST00000402314 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
ATG3-202ENST00000402314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
ATG3-202ENST00000402314 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
ATG3-202ENST00000402314 CDC42BPAQ5VT25 1732 aa19.21■□□□□ 0.67
ATG3-202ENST00000402314 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
ATG3-202ENST00000402314 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
ATG3-202ENST00000402314 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
ATG3-202ENST00000402314 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
ATG3-202ENST00000402314 NOP58Q9Y2X3 529 aaKnown RBP19.18■□□□□ 0.66
ATG3-202ENST00000402314 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
ATG3-202ENST00000402314 CROCC2H7BZ55 1655 aa19.16■□□□□ 0.66
ATG3-202ENST00000402314 MBD5Q9P267 1494 aa19.15■□□□□ 0.66
ATG3-202ENST00000402314 ST20-MTHFSA0A0A6YYL1 179 aa19.15■□□□□ 0.66
ATG3-202ENST00000402314 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.66
ATG3-202ENST00000402314 BCORL1Q5H9F3 1711 aa19.13■□□□□ 0.65
ATG3-202ENST00000402314 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
ATG3-202ENST00000402314 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
ATG3-202ENST00000402314 SALL2Q9Y467 1007 aaPredicted RBP19.1■□□□□ 0.65
ATG3-202ENST00000402314 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
ATG3-202ENST00000402314 IL27Q8NEV9 243 aa19.08■□□□□ 0.65
ATG3-202ENST00000402314 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
ATG3-202ENST00000402314 SAMD9LQ8IVG5 1584 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms