RNA–Protein interactions for RNA: ENST00000402142.3

CACNA1I-202, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1I, Length 10,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-202ENST00000402142 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
CACNA1I-202ENST00000402142 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
CACNA1I-202ENST00000402142 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
CACNA1I-202ENST00000402142 EEA1Q15075 1411 aa16.98■□□□□ 0.31
CACNA1I-202ENST00000402142 TPM2P07951 284 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 GSE1Q14687 1217 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 NEXNQ0ZGT2 675 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 RUFY1Q96T51 708 aa16.97■□□□□ 0.31
CACNA1I-202ENST00000402142 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
CACNA1I-202ENST00000402142 IPO7O95373 1038 aaKnown RBP16.95■□□□□ 0.3
CACNA1I-202ENST00000402142 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
CACNA1I-202ENST00000402142 ZRSR2Q15696 482 aaKnown RBP16.95■□□□□ 0.3
CACNA1I-202ENST00000402142 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
CACNA1I-202ENST00000402142 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
CACNA1I-202ENST00000402142 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
CACNA1I-202ENST00000402142 ST18O60284 1047 aa16.94■□□□□ 0.3
CACNA1I-202ENST00000402142 H0YHG0 523 aa16.93■□□□□ 0.3
CACNA1I-202ENST00000402142 GOLGA6L7A0A1B0GV03 622 aa16.93■□□□□ 0.3
CACNA1I-202ENST00000402142 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
CACNA1I-202ENST00000402142 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
CACNA1I-202ENST00000402142 MYO6Q9UM54 1294 aa16.92■□□□□ 0.3
CACNA1I-202ENST00000402142 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
CACNA1I-202ENST00000402142 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
CACNA1I-202ENST00000402142 HMGN5P82970 282 aaKnown RBP16.91■□□□□ 0.3
CACNA1I-202ENST00000402142 DHX8Q14562 1220 aaKnown RBP16.9■□□□□ 0.3
CACNA1I-202ENST00000402142 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
CACNA1I-202ENST00000402142 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
CACNA1I-202ENST00000402142 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
CACNA1I-202ENST00000402142 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
CACNA1I-202ENST00000402142 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.29
CACNA1I-202ENST00000402142 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
CACNA1I-202ENST00000402142 DYDC1Q8WWB3 177 aa16.88■□□□□ 0.29
CACNA1I-202ENST00000402142 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
CACNA1I-202ENST00000402142 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
CACNA1I-202ENST00000402142 LEKR1Q6ZMV7 388 aa16.86■□□□□ 0.29
CACNA1I-202ENST00000402142 CCP110O43303 1012 aa16.86■□□□□ 0.29
CACNA1I-202ENST00000402142 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
CACNA1I-202ENST00000402142 RRP9O43818 475 aaKnown RBP16.85■□□□□ 0.29
CACNA1I-202ENST00000402142 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
CACNA1I-202ENST00000402142 DEF6Q9H4E7 631 aa16.85■□□□□ 0.29
CACNA1I-202ENST00000402142 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
CACNA1I-202ENST00000402142 FAM13BQ9NYF5 915 aa16.84■□□□□ 0.29
CACNA1I-202ENST00000402142 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
CACNA1I-202ENST00000402142 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
CACNA1I-202ENST00000402142 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
CACNA1I-202ENST00000402142 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
CACNA1I-202ENST00000402142 CLIP1P30622 1438 aa16.82■□□□□ 0.28
CACNA1I-202ENST00000402142 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
CACNA1I-202ENST00000402142 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
CACNA1I-202ENST00000402142 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
CACNA1I-202ENST00000402142 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
CACNA1I-202ENST00000402142 BECN2A8MW95 431 aa16.79■□□□□ 0.28
CACNA1I-202ENST00000402142 TSPY4P0CV99 314 aa16.78■□□□□ 0.28
CACNA1I-202ENST00000402142 TSPY10P0CW01 314 aa16.78■□□□□ 0.28
CACNA1I-202ENST00000402142 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
CACNA1I-202ENST00000402142 KIAA0754O94854 1291 aa16.77■□□□□ 0.28
CACNA1I-202ENST00000402142 CCDC39Q9UFE4 941 aa16.77■□□□□ 0.28
CACNA1I-202ENST00000402142 HMGB1P09429 215 aaKnown RBP16.76■□□□□ 0.27
CACNA1I-202ENST00000402142 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1I-202ENST00000402142 TPD52L1Q16890 204 aaPredicted RBP16.76■□□□□ 0.27
CACNA1I-202ENST00000402142 CCDC173Q0VFZ6 552 aa16.75■□□□□ 0.27
CACNA1I-202ENST00000402142 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
CACNA1I-202ENST00000402142 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
CACNA1I-202ENST00000402142 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
CACNA1I-202ENST00000402142 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
CACNA1I-202ENST00000402142 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
CACNA1I-202ENST00000402142 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
CACNA1I-202ENST00000402142 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
CACNA1I-202ENST00000402142 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
CACNA1I-202ENST00000402142 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
CACNA1I-202ENST00000402142 TAF7LQ5H9L4 462 aa16.72■□□□□ 0.27
CACNA1I-202ENST00000402142 ZBTB7CA1YPR0 619 aa16.71■□□□□ 0.27
CACNA1I-202ENST00000402142 FAM107BQ9H098 131 aa16.69■□□□□ 0.26
CACNA1I-202ENST00000402142 GOLGA6L10A6NI86 522 aa16.69■□□□□ 0.26
CACNA1I-202ENST00000402142 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
CACNA1I-202ENST00000402142 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CACNA1I-202ENST00000402142 NPHP1O15259 732 aa16.68■□□□□ 0.26
CACNA1I-202ENST00000402142 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
CACNA1I-202ENST00000402142 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
CACNA1I-202ENST00000402142 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
CACNA1I-202ENST00000402142 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 ZNF592Q92610 1267 aa16.66■□□□□ 0.26
CACNA1I-202ENST00000402142 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 KIF7Q2M1P5 1343 aa16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 ROCK2O75116 1388 aaKnown RBP16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 RALBP1Q15311 655 aa16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
CACNA1I-202ENST00000402142 RABEP1Q15276 862 aa16.64■□□□□ 0.26
CACNA1I-202ENST00000402142 MRE11P49959 708 aa16.64■□□□□ 0.25
CACNA1I-202ENST00000402142 H3BQV1 296 aa16.64■□□□□ 0.25
CACNA1I-202ENST00000402142 IFFO2Q5TF58 517 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms