RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 CROCC2H7BZ55 1655 aa22.72■■□□□ 1.23
CDC42-203ENST00000400259 ADGBQ8N7X0 1667 aa22.72■■□□□ 1.23
CDC42-203ENST00000400259 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
CDC42-203ENST00000400259 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
CDC42-203ENST00000400259 ATP10BO94823 1461 aa22.71■■□□□ 1.23
CDC42-203ENST00000400259 CAMSAP2Q08AD1 1489 aa22.71■■□□□ 1.23
CDC42-203ENST00000400259 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
CDC42-203ENST00000400259 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
CDC42-203ENST00000400259 CENPBP07199 599 aaPredicted RBP22.68■■□□□ 1.22
CDC42-203ENST00000400259 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
CDC42-203ENST00000400259 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
CDC42-203ENST00000400259 PTPRGP23470 1445 aa22.64■■□□□ 1.21
CDC42-203ENST00000400259 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.21
CDC42-203ENST00000400259 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
CDC42-203ENST00000400259 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
CDC42-203ENST00000400259 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
CDC42-203ENST00000400259 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
CDC42-203ENST00000400259 PLEKHD1A6NEE1 506 aa22.6■■□□□ 1.21
CDC42-203ENST00000400259 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
CDC42-203ENST00000400259 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
CDC42-203ENST00000400259 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
CDC42-203ENST00000400259 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
CDC42-203ENST00000400259 TRIM52Q96A61 297 aa22.54■■□□□ 1.2
CDC42-203ENST00000400259 MPHOSPH9Q99550 1183 aa22.54■■□□□ 1.2
CDC42-203ENST00000400259 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
CDC42-203ENST00000400259 ARHGEF5Q12774 1597 aa22.51■■□□□ 1.19
CDC42-203ENST00000400259 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
CDC42-203ENST00000400259 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
CDC42-203ENST00000400259 ABCC2Q92887 1545 aa22.51■■□□□ 1.19
CDC42-203ENST00000400259 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
CDC42-203ENST00000400259 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
CDC42-203ENST00000400259 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
CDC42-203ENST00000400259 PZPP20742 1482 aa22.46■■□□□ 1.19
CDC42-203ENST00000400259 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
CDC42-203ENST00000400259 RPRD2Q5VT52 1461 aaKnown RBP22.44■■□□□ 1.18
CDC42-203ENST00000400259 SAMD9LQ8IVG5 1584 aa22.44■■□□□ 1.18
CDC42-203ENST00000400259 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
CDC42-203ENST00000400259 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
CDC42-203ENST00000400259 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
CDC42-203ENST00000400259 UHRF1BP1LA0JNW5 1464 aa22.4■■□□□ 1.18
CDC42-203ENST00000400259 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
CDC42-203ENST00000400259 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.17
CDC42-203ENST00000400259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.39■■□□□ 1.172e-6■□□□□ 10.8
CDC42-203ENST00000400259 KDM5DQ9BY66 1539 aa22.38■■□□□ 1.17
CDC42-203ENST00000400259 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
CDC42-203ENST00000400259 ZCCHC11Q5TAX3 1644 aaKnown RBP22.37■■□□□ 1.17
CDC42-203ENST00000400259 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
CDC42-203ENST00000400259 SLC4A1APQ9BWU0 796 aaKnown RBP22.36■■□□□ 1.17
CDC42-203ENST00000400259 MAST1Q9Y2H9 1570 aa22.35■■□□□ 1.17
CDC42-203ENST00000400259 KIAA1107Q9UPP5 1409 aa22.33■■□□□ 1.17
CDC42-203ENST00000400259 FOXD1Q16676 465 aa22.33■■□□□ 1.17
CDC42-203ENST00000400259 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
CDC42-203ENST00000400259 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
CDC42-203ENST00000400259 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
CDC42-203ENST00000400259 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
CDC42-203ENST00000400259 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
CDC42-203ENST00000400259 ARHGAP5Q13017 1502 aa22.3■■□□□ 1.16
CDC42-203ENST00000400259 SYCP2Q9BX26 1530 aa22.28■■□□□ 1.16
CDC42-203ENST00000400259 PLEKHH2Q8IVE3 1493 aa22.28■■□□□ 1.16
CDC42-203ENST00000400259 KIF15Q9NS87 1388 aa22.28■■□□□ 1.16
CDC42-203ENST00000400259 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
CDC42-203ENST00000400259 HNRNPMP52272 730 aaKnown RBP eCLIP22.27■■□□□ 1.164e-7■■□□□ 11.8
CDC42-203ENST00000400259 PLXNC1O60486 1568 aa22.26■■□□□ 1.15
CDC42-203ENST00000400259 POLR1AO95602 1720 aaPredicted RBP22.22■■□□□ 1.15
CDC42-203ENST00000400259 UNC13BO14795 1591 aa22.21■■□□□ 1.15
CDC42-203ENST00000400259 NUP155O75694 1391 aa22.21■■□□□ 1.15
CDC42-203ENST00000400259 PLCH2O75038 1416 aa22.2■■□□□ 1.15
CDC42-203ENST00000400259 PKD2Q13563 968 aa22.2■■□□□ 1.14
CDC42-203ENST00000400259 ARAP3Q8WWN8 1544 aa22.2■■□□□ 1.14
CDC42-203ENST00000400259 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
CDC42-203ENST00000400259 EIF4G2P78344 907 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDC42-203ENST00000400259 ABCC1P33527 1531 aa22.16■■□□□ 1.14
CDC42-203ENST00000400259 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
CDC42-203ENST00000400259 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
CDC42-203ENST00000400259 ARHGEF12Q9NZN5 1544 aa22.15■■□□□ 1.14
CDC42-203ENST00000400259 CCER2I3L3R5 266 aa22.15■■□□□ 1.14
CDC42-203ENST00000400259 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
CDC42-203ENST00000400259 IQGAP3Q86VI3 1631 aa22.12■■□□□ 1.13
CDC42-203ENST00000400259 DUOX2Q9NRD8 1548 aa22.12■■□□□ 1.13
CDC42-203ENST00000400259 ANP32CO43423 234 aa22.12■■□□□ 1.13
CDC42-203ENST00000400259 WASHC2AQ641Q2 1341 aa22.11■■□□□ 1.13
CDC42-203ENST00000400259 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
CDC42-203ENST00000400259 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
CDC42-203ENST00000400259 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
CDC42-203ENST00000400259 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
CDC42-203ENST00000400259 WDR7Q9Y4E6 1490 aa22.08■■□□□ 1.13
CDC42-203ENST00000400259 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
CDC42-203ENST00000400259 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
CDC42-203ENST00000400259 CCDC7Q96M83 1385 aa22.04■■□□□ 1.12
CDC42-203ENST00000400259 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
CDC42-203ENST00000400259 RALGAPBQ86X10 1494 aa22.04■■□□□ 1.12
CDC42-203ENST00000400259 KDM5CP41229 1560 aa22.03■■□□□ 1.12
CDC42-203ENST00000400259 RTEL1-TNFRSF6BF6WH68 1400 aa22.01■■□□□ 1.11
CDC42-203ENST00000400259 TRAPPC8Q9Y2L5 1435 aa22.01■■□□□ 1.11
CDC42-203ENST00000400259 ZFYVE16Q7Z3T8 1539 aa21.99■■□□□ 1.11
CDC42-203ENST00000400259 C11orf95C9JLR9 678 aaPredicted RBP21.97■■□□□ 1.11
CDC42-203ENST00000400259 ATP10AO60312 1499 aa21.97■■□□□ 1.11
CDC42-203ENST00000400259 BCORL1Q5H9F3 1711 aa21.96■■□□□ 1.11
CDC42-203ENST00000400259 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
CDC42-203ENST00000400259 PLA2R1Q13018 1463 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms