RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 ARID3AQ99856 593 aa18.26■□□□□ 0.51
TNRC18-203ENST00000399537 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
TNRC18-203ENST00000399537 PTMSP20962 102 aa18.23■□□□□ 0.51
TNRC18-203ENST00000399537 CFAP44Q96MT7 982 aa18.23■□□□□ 0.51
TNRC18-203ENST00000399537 SOX12O15370 315 aa18.22■□□□□ 0.51
TNRC18-203ENST00000399537 GBP4Q96PP9 640 aa18.22■□□□□ 0.51
TNRC18-203ENST00000399537 ARHGAP35Q9NRY4 1499 aa18.22■□□□□ 0.51
TNRC18-203ENST00000399537 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
TNRC18-203ENST00000399537 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
TNRC18-203ENST00000399537 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
TNRC18-203ENST00000399537 APBB1O00213 710 aa18.21■□□□□ 0.51
TNRC18-203ENST00000399537 TMF1P82094 1093 aa18.2■□□□□ 0.5
TNRC18-203ENST00000399537 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
TNRC18-203ENST00000399537 PRM3Q9NNZ6 103 aa18.19■□□□□ 0.5
TNRC18-203ENST00000399537 NACADO15069 1562 aa18.19■□□□□ 0.5
TNRC18-203ENST00000399537 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
TNRC18-203ENST00000399537 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
TNRC18-203ENST00000399537 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
TNRC18-203ENST00000399537 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
TNRC18-203ENST00000399537 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
TNRC18-203ENST00000399537 GZF1Q9H116 711 aaPredicted RBP18.15■□□□□ 0.5
TNRC18-203ENST00000399537 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
TNRC18-203ENST00000399537 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
TNRC18-203ENST00000399537 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
TNRC18-203ENST00000399537 A0A0U1RQG5 324 aaPredicted RBP18.14■□□□□ 0.49
TNRC18-203ENST00000399537 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
TNRC18-203ENST00000399537 TPM4P67936 248 aa18.13■□□□□ 0.49
TNRC18-203ENST00000399537 GOLGA6L1Q8N7Z2 621 aa18.13■□□□□ 0.49
TNRC18-203ENST00000399537 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
TNRC18-203ENST00000399537 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
TNRC18-203ENST00000399537 PDE4CQ08493 712 aa18.13■□□□□ 0.49
TNRC18-203ENST00000399537 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
TNRC18-203ENST00000399537 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
TNRC18-203ENST00000399537 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
TNRC18-203ENST00000399537 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
TNRC18-203ENST00000399537 TNNT3P45378 269 aaPredicted RBP18.1■□□□□ 0.49
TNRC18-203ENST00000399537 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
TNRC18-203ENST00000399537 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.49
TNRC18-203ENST00000399537 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.49
TNRC18-203ENST00000399537 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
TNRC18-203ENST00000399537 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
TNRC18-203ENST00000399537 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
TNRC18-203ENST00000399537 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
TNRC18-203ENST00000399537 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
TNRC18-203ENST00000399537 CCDC34Q96HJ3 373 aa18.04■□□□□ 0.48
TNRC18-203ENST00000399537 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
TNRC18-203ENST00000399537 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
TNRC18-203ENST00000399537 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
TNRC18-203ENST00000399537 RASSF8Q8NHQ8 419 aa18.03■□□□□ 0.48
TNRC18-203ENST00000399537 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
TNRC18-203ENST00000399537 SOGA1O94964 1423 aa18.03■□□□□ 0.48
TNRC18-203ENST00000399537 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
TNRC18-203ENST00000399537 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
TNRC18-203ENST00000399537 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
TNRC18-203ENST00000399537 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
TNRC18-203ENST00000399537 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.48
TNRC18-203ENST00000399537 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.47
TNRC18-203ENST00000399537 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
TNRC18-203ENST00000399537 MLECQ14165 292 aa18.01■□□□□ 0.47
TNRC18-203ENST00000399537 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
TNRC18-203ENST00000399537 PHF14O94880 888 aa18.01■□□□□ 0.47
TNRC18-203ENST00000399537 STK26Q9P289 416 aa18.01■□□□□ 0.47
TNRC18-203ENST00000399537 CREBRFQ8IUR6 639 aa18.01■□□□□ 0.47
TNRC18-203ENST00000399537 MFAP1P55081 439 aaKnown RBP18■□□□□ 0.47
TNRC18-203ENST00000399537 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
TNRC18-203ENST00000399537 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
TNRC18-203ENST00000399537 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
TNRC18-203ENST00000399537 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
TNRC18-203ENST00000399537 CUX2O14529 1486 aa17.97■□□□□ 0.47
TNRC18-203ENST00000399537 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
TNRC18-203ENST00000399537 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
TNRC18-203ENST00000399537 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■■□□□ 11.7
TNRC18-203ENST00000399537 FOXD1Q16676 465 aa17.97■□□□□ 0.47
TNRC18-203ENST00000399537 TIMELESSQ9UNS1 1208 aa17.96■□□□□ 0.47
TNRC18-203ENST00000399537 RALBP1Q15311 655 aa17.96■□□□□ 0.47
TNRC18-203ENST00000399537 STK31Q9BXU1 1019 aa17.96■□□□□ 0.47
TNRC18-203ENST00000399537 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
TNRC18-203ENST00000399537 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
TNRC18-203ENST00000399537 TPM3P06753 285 aa17.96■□□□□ 0.47
TNRC18-203ENST00000399537 HMMRO75330 724 aa17.94■□□□□ 0.46
TNRC18-203ENST00000399537 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
TNRC18-203ENST00000399537 CEP89Q96ST8 783 aa17.92■□□□□ 0.46
TNRC18-203ENST00000399537 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
TNRC18-203ENST00000399537 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
TNRC18-203ENST00000399537 SETQ01105 290 aaPredicted RBP17.92■□□□□ 0.46
TNRC18-203ENST00000399537 WIZO95785 1651 aa17.91■□□□□ 0.46
TNRC18-203ENST00000399537 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
TNRC18-203ENST00000399537 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
TNRC18-203ENST00000399537 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.46
TNRC18-203ENST00000399537 PKD2Q13563 968 aa17.89■□□□□ 0.45
TNRC18-203ENST00000399537 G3V3G9 751 aa17.89■□□□□ 0.45
TNRC18-203ENST00000399537 DCAF8Q5TAQ9 597 aa17.89■□□□□ 0.45
TNRC18-203ENST00000399537 FOXD4L5Q5VV16 416 aaPredicted RBP17.88■□□□□ 0.45
TNRC18-203ENST00000399537 FOXD4L4Q8WXT5 416 aaPredicted RBP17.88■□□□□ 0.45
TNRC18-203ENST00000399537 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
TNRC18-203ENST00000399537 KAT6BQ8WYB5 2073 aa17.88■□□□□ 0.45
TNRC18-203ENST00000399537 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
TNRC18-203ENST00000399537 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
TNRC18-203ENST00000399537 ST18O60284 1047 aa17.87■□□□□ 0.45
TNRC18-203ENST00000399537 HSP90AA2PQ14568 343 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms