RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CWC22Q9HCG8 908 aaKnown RBP8.93□□□□□ -0.98
TRAPPC13-202ENST00000399438 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
TRAPPC13-202ENST00000399438 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC13-202ENST00000399438 GTPBP6O43824 516 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-202ENST00000399438 CERS3Q8IU89 383 aa8.91□□□□□ -0.98
TRAPPC13-202ENST00000399438 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
TRAPPC13-202ENST00000399438 ZNF592Q92610 1267 aa8.9□□□□□ -0.98
TRAPPC13-202ENST00000399438 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC13-202ENST00000399438 TICAM2Q86XR7 235 aa8.9□□□□□ -0.98
TRAPPC13-202ENST00000399438 POLA1P09884 1462 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC13-202ENST00000399438 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC13-202ENST00000399438 P3H3Q8IVL6 736 aa8.9□□□□□ -0.99
TRAPPC13-202ENST00000399438 IL27Q8NEV9 243 aa8.9□□□□□ -0.99
TRAPPC13-202ENST00000399438 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
TRAPPC13-202ENST00000399438 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC13-202ENST00000399438 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-202ENST00000399438 ITGAEP38570 1179 aa8.88□□□□□ -0.99
TRAPPC13-202ENST00000399438 FGD1P98174 961 aa8.88□□□□□ -0.99
TRAPPC13-202ENST00000399438 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
TRAPPC13-202ENST00000399438 CUX2O14529 1486 aa8.87□□□□□ -0.99
TRAPPC13-202ENST00000399438 TMED8Q6PL24 325 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC13-202ENST00000399438 YTHDC1Q96MU7 727 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-202ENST00000399438 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-202ENST00000399438 PKNOX2Q96KN3 472 aa8.86□□□□□ -0.99
TRAPPC13-202ENST00000399438 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-202ENST00000399438 CCDC125Q86Z20 511 aa8.85□□□□□ -0.99
TRAPPC13-202ENST00000399438 PPM1GO15355 546 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC13-202ENST00000399438 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
TRAPPC13-202ENST00000399438 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
TRAPPC13-202ENST00000399438 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
TRAPPC13-202ENST00000399438 ABCA10Q8WWZ4 1543 aa8.84□□□□□ -0.99
TRAPPC13-202ENST00000399438 SCAF1Q9H7N4 1312 aaKnown RBP8.83□□□□□ -1
TRAPPC13-202ENST00000399438 ZMYND10O75800 440 aa8.82□□□□□ -1
TRAPPC13-202ENST00000399438 IRF5Q13568 498 aa8.82□□□□□ -1
TRAPPC13-202ENST00000399438 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
TRAPPC13-202ENST00000399438 TNIKQ9UKE5 1360 aa8.82□□□□□ -1
TRAPPC13-202ENST00000399438 RAPGEF2Q9Y4G8 1499 aa8.82□□□□□ -1
TRAPPC13-202ENST00000399438 PSMD1Q99460 953 aa8.82□□□□□ -1
TRAPPC13-202ENST00000399438 CLSTN1O94985 981 aa8.81□□□□□ -1
TRAPPC13-202ENST00000399438 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
TRAPPC13-202ENST00000399438 TRAK2O60296 914 aa8.8□□□□□ -1
TRAPPC13-202ENST00000399438 BARGINQ6ZT62 677 aa8.8□□□□□ -1
TRAPPC13-202ENST00000399438 WDR70Q9NW82 654 aa8.8□□□□□ -1
TRAPPC13-202ENST00000399438 CLIP1P30622 1438 aa8.8□□□□□ -1
TRAPPC13-202ENST00000399438 DIEXFQ68CQ4 756 aaKnown RBP8.8□□□□□ -1
TRAPPC13-202ENST00000399438 ZNF316A6NFI3 1004 aaPredicted RBP8.79□□□□□ -1
TRAPPC13-202ENST00000399438 GOLGA3Q08378 1498 aa8.79□□□□□ -1
TRAPPC13-202ENST00000399438 KANK4Q5T7N3 995 aaPredicted RBP8.78□□□□□ -1
TRAPPC13-202ENST00000399438 RETREG2Q8NC44 543 aa8.78□□□□□ -1
TRAPPC13-202ENST00000399438 EEA1Q15075 1411 aa8.78□□□□□ -1
TRAPPC13-202ENST00000399438 KIF27Q86VH2 1401 aa8.78□□□□□ -1
TRAPPC13-202ENST00000399438 ZNF608Q9ULD9 1512 aaPredicted RBP8.78□□□□□ -1
TRAPPC13-202ENST00000399438 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
TRAPPC13-202ENST00000399438 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
TRAPPC13-202ENST00000399438 CLUAP1Q96AJ1 413 aa8.77□□□□□ -1.01
TRAPPC13-202ENST00000399438 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
TRAPPC13-202ENST00000399438 PBRM1Q86U86 1689 aa8.76□□□□□ -1.01
TRAPPC13-202ENST00000399438 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC13-202ENST00000399438 GAPVD1Q14C86 1478 aa8.76□□□□□ -1.01
TRAPPC13-202ENST00000399438 TDRD9Q8NDG6 1382 aaKnown RBP8.75□□□□□ -1.01
TRAPPC13-202ENST00000399438 ARID4BQ4LE39 1312 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC13-202ENST00000399438 A6NJR5 290 aa8.75□□□□□ -1.01
TRAPPC13-202ENST00000399438 KDM4CQ9H3R0 1056 aa8.75□□□□□ -1.01
TRAPPC13-202ENST00000399438 ERICH3Q5RHP9 1530 aa8.74□□□□□ -1.01
TRAPPC13-202ENST00000399438 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRAPPC13-202ENST00000399438 IGSF5Q9NSI5 407 aa8.74□□□□□ -1.01
TRAPPC13-202ENST00000399438 CCDC27Q2M243 656 aa8.74□□□□□ -1.01
TRAPPC13-202ENST00000399438 CCDC136Q96JN2 1154 aa8.74□□□□□ -1.01
TRAPPC13-202ENST00000399438 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
TRAPPC13-202ENST00000399438 GRIN2BQ13224 1484 aa8.72□□□□□ -1.01
TRAPPC13-202ENST00000399438 FLIIQ13045 1269 aa8.72□□□□□ -1.01
TRAPPC13-202ENST00000399438 IGF1RP08069 1367 aa8.72□□□□□ -1.01
TRAPPC13-202ENST00000399438 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
TRAPPC13-202ENST00000399438 CUL7Q14999 1698 aa8.72□□□□□ -1.01
TRAPPC13-202ENST00000399438 KDM4AO75164 1064 aa8.71□□□□□ -1.02
TRAPPC13-202ENST00000399438 RNF25Q96BH1 459 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC13-202ENST00000399438 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC13-202ENST00000399438 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
TRAPPC13-202ENST00000399438 KIF21BO75037 1637 aa8.7□□□□□ -1.02
TRAPPC13-202ENST00000399438 ZNF326Q5BKZ1 582 aaKnown RBP8.7□□□□□ -1.02
TRAPPC13-202ENST00000399438 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
TRAPPC13-202ENST00000399438 MAGI1Q96QZ7 1491 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC13-202ENST00000399438 SNAPC4Q5SXM2 1469 aa8.68□□□□□ -1.02
TRAPPC13-202ENST00000399438 UNCXA6NJT0 531 aa8.68□□□□□ -1.02
TRAPPC13-202ENST00000399438 MIER1Q8N108 512 aa8.68□□□□□ -1.02
TRAPPC13-202ENST00000399438 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
TRAPPC13-202ENST00000399438 VPS8Q8N3P4 1428 aa8.67□□□□□ -1.02
TRAPPC13-202ENST00000399438 CARMIL1Q5VZK9 1371 aa8.66□□□□□ -1.02
TRAPPC13-202ENST00000399438 A0A0U1RQG5 324 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-202ENST00000399438 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-202ENST00000399438 ZNF526Q8TF50 670 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-202ENST00000399438 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-202ENST00000399438 FAM50AQ14320 339 aaKnown RBP8.65□□□□□ -1.03
TRAPPC13-202ENST00000399438 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.03
TRAPPC13-202ENST00000399438 SYNJ2O15056 1496 aa8.65□□□□□ -1.03
TRAPPC13-202ENST00000399438 ACIN1Q9UKV3 1341 aaKnown RBP8.64□□□□□ -1.03
TRAPPC13-202ENST00000399438 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-202ENST00000399438 SEMA3EO15041 775 aa8.63□□□□□ -1.03
TRAPPC13-202ENST00000399438 SMARCA5O60264 1052 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-202ENST00000399438 AK7Q96M32 723 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms