RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZNF777Q9ULD5 760 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-205ENST00000398978 POLR3GLQ9BT43 218 aa27.08■■□□□ 1.92
COL13A1-205ENST00000398978 WDR62O43379 1518 aa27.07■■□□□ 1.92
COL13A1-205ENST00000398978 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
COL13A1-205ENST00000398978 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
COL13A1-205ENST00000398978 SENP3-EIF4A1A0A087X0R7 540 aa27.05■■□□□ 1.92
COL13A1-205ENST00000398978 MIA2Q96PC5 1412 aa27.03■■□□□ 1.92
COL13A1-205ENST00000398978 DAPK1P53355 1430 aa27.03■■□□□ 1.92
COL13A1-205ENST00000398978 MRS2Q9HD23 443 aa27.02■■□□□ 1.92
COL13A1-205ENST00000398978 ABCC5O15440 1437 aa27.01■■□□□ 1.91
COL13A1-205ENST00000398978 CNTLNQ9NXG0 1405 aa27■■□□□ 1.91
COL13A1-205ENST00000398978 CCDC7Q96M83 1385 aa27■■□□□ 1.91
COL13A1-205ENST00000398978 PRKRIP1Q9H875 184 aaPredicted RBP27■■□□□ 1.91
COL13A1-205ENST00000398978 ANKRD30BQ9BXX2 1392 aa27■■□□□ 1.91
COL13A1-205ENST00000398978 FBLN2P98095 1184 aa27■■□□□ 1.91
COL13A1-205ENST00000398978 AKNAQ7Z591 1439 aa26.97■■□□□ 1.91
COL13A1-205ENST00000398978 PRG4Q92954 1404 aaPredicted RBP26.95■■□□□ 1.9
COL13A1-205ENST00000398978 KIF7Q2M1P5 1343 aa26.95■■□□□ 1.9
COL13A1-205ENST00000398978 NUP153P49790 1475 aaKnown RBP26.94■■□□□ 1.9
COL13A1-205ENST00000398978 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
COL13A1-205ENST00000398978 CFDP1Q9UEE9 299 aaPredicted RBP26.93■■□□□ 1.9
COL13A1-205ENST00000398978 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
COL13A1-205ENST00000398978 NCOA1Q15788 1441 aa26.93■■□□□ 1.9
COL13A1-205ENST00000398978 RPRD2Q5VT52 1461 aaKnown RBP26.91■■□□□ 1.9
COL13A1-205ENST00000398978 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-205ENST00000398978 TEX14Q8IWB6 1497 aa26.88■■□□□ 1.89
COL13A1-205ENST00000398978 KIAA0556O60303 1618 aa26.87■■□□□ 1.89
COL13A1-205ENST00000398978 ROCK1Q13464 1354 aa26.85■■□□□ 1.89
COL13A1-205ENST00000398978 DNMT1P26358 1616 aaKnown RBP26.84■■□□□ 1.89
COL13A1-205ENST00000398978 KIAA0586Q9BVV6 1533 aa26.84■■□□□ 1.89
COL13A1-205ENST00000398978 PLB1Q6P1J6 1458 aa26.84■■□□□ 1.89
COL13A1-205ENST00000398978 PKD2Q13563 968 aa26.83■■□□□ 1.89
COL13A1-205ENST00000398978 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
COL13A1-205ENST00000398978 B4GALNT3Q6L9W6 998 aa26.83■■□□□ 1.89
COL13A1-205ENST00000398978 MSH5O43196 834 aa26.82■■□□□ 1.88
COL13A1-205ENST00000398978 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
COL13A1-205ENST00000398978 PZPP20742 1482 aa26.78■■□□□ 1.88
COL13A1-205ENST00000398978 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
COL13A1-205ENST00000398978 CAMSAP2Q08AD1 1489 aa26.78■■□□□ 1.88
COL13A1-205ENST00000398978 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
COL13A1-205ENST00000398978 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
COL13A1-205ENST00000398978 KDM2AQ9Y2K7 1162 aa26.75■■□□□ 1.87
COL13A1-205ENST00000398978 KIF14Q15058 1648 aa26.74■■□□□ 1.87
COL13A1-205ENST00000398978 TROQ12816 1431 aaPredicted RBP26.73■■□□□ 1.87
COL13A1-205ENST00000398978 GPATCH8Q9UKJ3 1502 aaKnown RBP26.72■■□□□ 1.87
COL13A1-205ENST00000398978 ZBED9Q6R2W3 1325 aa26.72■■□□□ 1.87
COL13A1-205ENST00000398978 USP47Q96K76 1375 aa26.71■■□□□ 1.87
COL13A1-205ENST00000398978 PPP4R2Q9NY27 417 aa26.71■■□□□ 1.87
COL13A1-205ENST00000398978 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
COL13A1-205ENST00000398978 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
COL13A1-205ENST00000398978 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
COL13A1-205ENST00000398978 NUP155O75694 1391 aa26.64■■□□□ 1.86
COL13A1-205ENST00000398978 BCORL1Q5H9F3 1711 aa26.64■■□□□ 1.85
COL13A1-205ENST00000398978 DHX29Q7Z478 1369 aaKnown RBP26.63■■□□□ 1.85
COL13A1-205ENST00000398978 HNRNPMP52272 730 aaKnown RBP eCLIP26.62■■□□□ 1.85
COL13A1-205ENST00000398978 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
COL13A1-205ENST00000398978 CARD11Q9BXL7 1154 aa26.62■■□□□ 1.85
COL13A1-205ENST00000398978 ANKRD50Q9ULJ7 1429 aa26.61■■□□□ 1.85
COL13A1-205ENST00000398978 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
COL13A1-205ENST00000398978 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
COL13A1-205ENST00000398978 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
COL13A1-205ENST00000398978 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
COL13A1-205ENST00000398978 ST20-MTHFSA0A0A6YYL1 179 aa26.56■■□□□ 1.84
COL13A1-205ENST00000398978 MBD5Q9P267 1494 aa26.55■■□□□ 1.84
COL13A1-205ENST00000398978 SALL2Q9Y467 1007 aaPredicted RBP26.54■■□□□ 1.84
COL13A1-205ENST00000398978 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
COL13A1-205ENST00000398978 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
COL13A1-205ENST00000398978 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
COL13A1-205ENST00000398978 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
COL13A1-205ENST00000398978 ADGBQ8N7X0 1667 aa26.52■■□□□ 1.84
COL13A1-205ENST00000398978 ERICH6BQ5W0A0 696 aa26.5■■□□□ 1.83
COL13A1-205ENST00000398978 CARMIL2Q6F5E8 1435 aa26.5■■□□□ 1.83
COL13A1-205ENST00000398978 ERICH6Q7L0X2 663 aa26.5■■□□□ 1.83
COL13A1-205ENST00000398978 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
COL13A1-205ENST00000398978 C9orf84Q5VXU9 1444 aa26.5■■□□□ 1.83
COL13A1-205ENST00000398978 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
COL13A1-205ENST00000398978 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
COL13A1-205ENST00000398978 FANCIQ9NVI1 1328 aa26.48■■□□□ 1.83
COL13A1-205ENST00000398978 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
COL13A1-205ENST00000398978 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
COL13A1-205ENST00000398978 KDM5CP41229 1560 aa26.46■■□□□ 1.83
COL13A1-205ENST00000398978 PNISRQ8TF01 805 aaKnown RBP26.46■■□□□ 1.83
COL13A1-205ENST00000398978 ATP10BO94823 1461 aa26.45■■□□□ 1.83
COL13A1-205ENST00000398978 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.83
COL13A1-205ENST00000398978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.83
COL13A1-205ENST00000398978 CROCC2H7BZ55 1655 aa26.45■■□□□ 1.82
COL13A1-205ENST00000398978 KIF15Q9NS87 1388 aa26.43■■□□□ 1.82
COL13A1-205ENST00000398978 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
COL13A1-205ENST00000398978 SMG6Q86US8 1419 aaKnown RBP26.41■■□□□ 1.82
COL13A1-205ENST00000398978 CCDC136Q96JN2 1154 aa26.4■■□□□ 1.82
COL13A1-205ENST00000398978 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.82
COL13A1-205ENST00000398978 ABCC10Q5T3U5 1492 aa26.38■■□□□ 1.81
COL13A1-205ENST00000398978 NBPF1Q3BBV0 1214 aa26.38■■□□□ 1.81
COL13A1-205ENST00000398978 ROCK2O75116 1388 aaKnown RBP26.37■■□□□ 1.81
COL13A1-205ENST00000398978 RALGAPBQ86X10 1494 aa26.36■■□□□ 1.81
COL13A1-205ENST00000398978 NUP160Q12769 1436 aa26.36■■□□□ 1.81
COL13A1-205ENST00000398978 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.81
COL13A1-205ENST00000398978 ABCA8O94911 1581 aa26.31■■□□□ 1.8
COL13A1-205ENST00000398978 ARID4BQ4LE39 1312 aaPredicted RBP26.29■■□□□ 1.8
COL13A1-205ENST00000398978 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms