RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
SEC24A-202ENST00000398844 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
SEC24A-202ENST00000398844 NEFMP07197 916 aa12.07□□□□□ -0.48
SEC24A-202ENST00000398844 ARXQ96QS3 562 aa12.07□□□□□ -0.48
SEC24A-202ENST00000398844 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
SEC24A-202ENST00000398844 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 FYCO1Q9BQS8 1478 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 TIMELESSQ9UNS1 1208 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 MYOM3Q5VTT5 1437 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 ANKRD30AQ9BXX3 1397 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
SEC24A-202ENST00000398844 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
SEC24A-202ENST00000398844 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
SEC24A-202ENST00000398844 PPP4R2Q9NY27 417 aa12.05□□□□□ -0.48
SEC24A-202ENST00000398844 ZBTB7CA1YPR0 619 aa12.04□□□□□ -0.48
SEC24A-202ENST00000398844 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
SEC24A-202ENST00000398844 MLECQ14165 292 aa12.02□□□□□ -0.49
SEC24A-202ENST00000398844 GGT6Q6P531 493 aa12.02□□□□□ -0.49
SEC24A-202ENST00000398844 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
SEC24A-202ENST00000398844 TMF1P82094 1093 aa12.01□□□□□ -0.49
SEC24A-202ENST00000398844 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
SEC24A-202ENST00000398844 STK26Q9P289 416 aa12□□□□□ -0.49
SEC24A-202ENST00000398844 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
SEC24A-202ENST00000398844 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
SEC24A-202ENST00000398844 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
SEC24A-202ENST00000398844 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
SEC24A-202ENST00000398844 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
SEC24A-202ENST00000398844 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
SEC24A-202ENST00000398844 RGS3P49796 1198 aa11.98□□□□□ -0.49
SEC24A-202ENST00000398844 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
SEC24A-202ENST00000398844 UACAQ9BZF9 1416 aa11.98□□□□□ -0.49
SEC24A-202ENST00000398844 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.49
SEC24A-202ENST00000398844 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
SEC24A-202ENST00000398844 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
SEC24A-202ENST00000398844 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
SEC24A-202ENST00000398844 EHBP1L1Q8N3D4 1523 aa11.96□□□□□ -0.5
SEC24A-202ENST00000398844 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
SEC24A-202ENST00000398844 PRG4Q92954 1404 aaPredicted RBP11.95□□□□□ -0.5
SEC24A-202ENST00000398844 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
SEC24A-202ENST00000398844 USP47Q96K76 1375 aa11.95□□□□□ -0.5
SEC24A-202ENST00000398844 KIF3BO15066 747 aa11.95□□□□□ -0.5
SEC24A-202ENST00000398844 KANK1Q14678 1352 aa11.95□□□□□ -0.5
SEC24A-202ENST00000398844 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
SEC24A-202ENST00000398844 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
SEC24A-202ENST00000398844 U2SURPO15042 1029 aaKnown RBP11.94□□□□□ -0.5
SEC24A-202ENST00000398844 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
SEC24A-202ENST00000398844 CUL7Q14999 1698 aa11.93□□□□□ -0.5
SEC24A-202ENST00000398844 PTPRGP23470 1445 aa11.93□□□□□ -0.5
SEC24A-202ENST00000398844 ABCA10Q8WWZ4 1543 aa11.93□□□□□ -0.5
SEC24A-202ENST00000398844 POGKQ9P215 609 aa11.93□□□□□ -0.5
SEC24A-202ENST00000398844 SOX12O15370 315 aa11.92□□□□□ -0.5
SEC24A-202ENST00000398844 PLIN1O60240 522 aa11.92□□□□□ -0.5
SEC24A-202ENST00000398844 PRKRIP1Q9H875 184 aaPredicted RBP11.92□□□□□ -0.5
SEC24A-202ENST00000398844 KIF7Q2M1P5 1343 aa11.92□□□□□ -0.5
SEC24A-202ENST00000398844 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
SEC24A-202ENST00000398844 PANK3Q9H999 370 aa11.91□□□□□ -0.5
SEC24A-202ENST00000398844 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
SEC24A-202ENST00000398844 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
SEC24A-202ENST00000398844 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
SEC24A-202ENST00000398844 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.51
SEC24A-202ENST00000398844 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
SEC24A-202ENST00000398844 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
SEC24A-202ENST00000398844 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
SEC24A-202ENST00000398844 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
SEC24A-202ENST00000398844 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
SEC24A-202ENST00000398844 NOP58Q9Y2X3 529 aaKnown RBP11.89□□□□□ -0.51
SEC24A-202ENST00000398844 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
SEC24A-202ENST00000398844 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
SEC24A-202ENST00000398844 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
SEC24A-202ENST00000398844 ARHGAP5Q13017 1502 aa11.88□□□□□ -0.51
SEC24A-202ENST00000398844 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
SEC24A-202ENST00000398844 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
SEC24A-202ENST00000398844 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
SEC24A-202ENST00000398844 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
SEC24A-202ENST00000398844 DAPK1P53355 1430 aa11.87□□□□□ -0.51
SEC24A-202ENST00000398844 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
SEC24A-202ENST00000398844 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
SEC24A-202ENST00000398844 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
SEC24A-202ENST00000398844 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
SEC24A-202ENST00000398844 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
SEC24A-202ENST00000398844 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
SEC24A-202ENST00000398844 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
SEC24A-202ENST00000398844 RALBP1Q15311 655 aa11.86□□□□□ -0.51
SEC24A-202ENST00000398844 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
SEC24A-202ENST00000398844 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
SEC24A-202ENST00000398844 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SEC24A-202ENST00000398844 IFT140Q96RY7 1462 aa11.85□□□□□ -0.51
SEC24A-202ENST00000398844 HFM1A2PYH4 1435 aa11.84□□□□□ -0.51
SEC24A-202ENST00000398844 NAIPQ13075 1403 aa11.83□□□□□ -0.52
SEC24A-202ENST00000398844 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
SEC24A-202ENST00000398844 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
SEC24A-202ENST00000398844 ANKRD50Q9ULJ7 1429 aa11.83□□□□□ -0.52
SEC24A-202ENST00000398844 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.52
SEC24A-202ENST00000398844 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
SEC24A-202ENST00000398844 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
SEC24A-202ENST00000398844 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
SEC24A-202ENST00000398844 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
SEC24A-202ENST00000398844 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
SEC24A-202ENST00000398844 TPRNQ4KMQ1 711 aa11.81□□□□□ -0.52
SEC24A-202ENST00000398844 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms