RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 NEUROD2Q15784 382 aa14.1□□□□□ -0.15
PCDHGA10-201ENST00000398610 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
PCDHGA10-201ENST00000398610 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.16
PCDHGA10-201ENST00000398610 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
PCDHGA10-201ENST00000398610 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
PCDHGA10-201ENST00000398610 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
PCDHGA10-201ENST00000398610 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
PCDHGA10-201ENST00000398610 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
PCDHGA10-201ENST00000398610 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
PCDHGA10-201ENST00000398610 MAPKBP1O60336 1514 aa14.06□□□□□ -0.16
PCDHGA10-201ENST00000398610 ARXQ96QS3 562 aa14.06□□□□□ -0.16
PCDHGA10-201ENST00000398610 SOX12O15370 315 aa14.05□□□□□ -0.16
PCDHGA10-201ENST00000398610 SAFB2Q14151 953 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGA10-201ENST00000398610 HAP1P54257 671 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA10-201ENST00000398610 CARD11Q9BXL7 1154 aa14.04□□□□□ -0.16
PCDHGA10-201ENST00000398610 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.16
PCDHGA10-201ENST00000398610 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
PCDHGA10-201ENST00000398610 FOXD1Q16676 465 aa14.02□□□□□ -0.16
PCDHGA10-201ENST00000398610 GGT6Q6P531 493 aa14.02□□□□□ -0.16
PCDHGA10-201ENST00000398610 WDR97A6NE52 1622 aa14.02□□□□□ -0.17
PCDHGA10-201ENST00000398610 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
PCDHGA10-201ENST00000398610 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
PCDHGA10-201ENST00000398610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
PCDHGA10-201ENST00000398610 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
PCDHGA10-201ENST00000398610 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
PCDHGA10-201ENST00000398610 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
PCDHGA10-201ENST00000398610 PODXL2Q9NZ53 605 aa13.99□□□□□ -0.17
PCDHGA10-201ENST00000398610 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
PCDHGA10-201ENST00000398610 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
PCDHGA10-201ENST00000398610 POGKQ9P215 609 aa13.98□□□□□ -0.17
PCDHGA10-201ENST00000398610 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
PCDHGA10-201ENST00000398610 CDK11BP21127 795 aaKnown RBP13.97□□□□□ -0.17
PCDHGA10-201ENST00000398610 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
PCDHGA10-201ENST00000398610 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
PCDHGA10-201ENST00000398610 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA10-201ENST00000398610 CDK13Q14004 1512 aaKnown RBP13.97□□□□□ -0.17
PCDHGA10-201ENST00000398610 SUPT6HQ7KZ85 1726 aaKnown RBP13.96□□□□□ -0.17
PCDHGA10-201ENST00000398610 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
PCDHGA10-201ENST00000398610 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
PCDHGA10-201ENST00000398610 MPHOSPH9Q99550 1183 aa13.96□□□□□ -0.17
PCDHGA10-201ENST00000398610 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA10-201ENST00000398610 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
PCDHGA10-201ENST00000398610 KNSTRNQ9Y448 316 aa13.95□□□□□ -0.18
PCDHGA10-201ENST00000398610 NAIPQ13075 1403 aa13.95□□□□□ -0.18
PCDHGA10-201ENST00000398610 NBR1Q14596 966 aa13.94□□□□□ -0.18
PCDHGA10-201ENST00000398610 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA10-201ENST00000398610 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
PCDHGA10-201ENST00000398610 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
PCDHGA10-201ENST00000398610 CARMIL2Q6F5E8 1435 aa13.93□□□□□ -0.18
PCDHGA10-201ENST00000398610 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
PCDHGA10-201ENST00000398610 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
PCDHGA10-201ENST00000398610 STK26Q9P289 416 aa13.92□□□□□ -0.18
PCDHGA10-201ENST00000398610 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
PCDHGA10-201ENST00000398610 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA10-201ENST00000398610 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
PCDHGA10-201ENST00000398610 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
PCDHGA10-201ENST00000398610 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
PCDHGA10-201ENST00000398610 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
PCDHGA10-201ENST00000398610 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
PCDHGA10-201ENST00000398610 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
PCDHGA10-201ENST00000398610 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
PCDHGA10-201ENST00000398610 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
PCDHGA10-201ENST00000398610 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
PCDHGA10-201ENST00000398610 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
PCDHGA10-201ENST00000398610 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
PCDHGA10-201ENST00000398610 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
PCDHGA10-201ENST00000398610 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA10-201ENST00000398610 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
PCDHGA10-201ENST00000398610 PKD2Q13563 968 aa13.84□□□□□ -0.19
PCDHGA10-201ENST00000398610 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA10-201ENST00000398610 CFAP53Q96M91 514 aa13.84□□□□□ -0.19
PCDHGA10-201ENST00000398610 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
PCDHGA10-201ENST00000398610 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.19
PCDHGA10-201ENST00000398610 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA10-201ENST00000398610 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
PCDHGA10-201ENST00000398610 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
PCDHGA10-201ENST00000398610 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
PCDHGA10-201ENST00000398610 NUTM2FA1L443 756 aa13.8□□□□□ -0.2
PCDHGA10-201ENST00000398610 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
PCDHGA10-201ENST00000398610 DAPK1P53355 1430 aa13.79□□□□□ -0.2
PCDHGA10-201ENST00000398610 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
PCDHGA10-201ENST00000398610 WDR62O43379 1518 aa13.79□□□□□ -0.2
PCDHGA10-201ENST00000398610 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
PCDHGA10-201ENST00000398610 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA10-201ENST00000398610 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
PCDHGA10-201ENST00000398610 PLB1Q6P1J6 1458 aa13.78□□□□□ -0.2
PCDHGA10-201ENST00000398610 KIF3BO15066 747 aa13.78□□□□□ -0.2
PCDHGA10-201ENST00000398610 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.2
PCDHGA10-201ENST00000398610 RGS3P49796 1198 aa13.77□□□□□ -0.21
PCDHGA10-201ENST00000398610 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
PCDHGA10-201ENST00000398610 ANKRD30AQ9BXX3 1397 aa13.76□□□□□ -0.21
PCDHGA10-201ENST00000398610 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
PCDHGA10-201ENST00000398610 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
PCDHGA10-201ENST00000398610 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
PCDHGA10-201ENST00000398610 TROQ12816 1431 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA10-201ENST00000398610 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
PCDHGA10-201ENST00000398610 ABCC5O15440 1437 aa13.75□□□□□ -0.21
PCDHGA10-201ENST00000398610 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
PCDHGA10-201ENST00000398610 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
PCDHGA10-201ENST00000398610 DISP1Q96F81 1524 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms