RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 PLCH2O75038 1416 aa23.68■■□□□ 1.38
RAB1A-201ENST00000398529 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
RAB1A-201ENST00000398529 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
RAB1A-201ENST00000398529 EFCAB2Q5VUJ9 269 aa23.68■■□□□ 1.38
RAB1A-201ENST00000398529 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
RAB1A-201ENST00000398529 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
RAB1A-201ENST00000398529 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.38
RAB1A-201ENST00000398529 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
RAB1A-201ENST00000398529 ATP10AO60312 1499 aa23.62■■□□□ 1.37
RAB1A-201ENST00000398529 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
RAB1A-201ENST00000398529 SIGLEC1Q9BZZ2 1709 aa23.6■■□□□ 1.37
RAB1A-201ENST00000398529 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
RAB1A-201ENST00000398529 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
RAB1A-201ENST00000398529 KIF14Q15058 1648 aa23.56■■□□□ 1.36
RAB1A-201ENST00000398529 CLIP1P30622 1438 aa23.56■■□□□ 1.36
RAB1A-201ENST00000398529 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
RAB1A-201ENST00000398529 PREX1Q8TCU6 1659 aa23.54■■□□□ 1.36
RAB1A-201ENST00000398529 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
RAB1A-201ENST00000398529 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
RAB1A-201ENST00000398529 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
RAB1A-201ENST00000398529 ESF1Q9H501 851 aaKnown RBP23.51■■□□□ 1.35
RAB1A-201ENST00000398529 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
RAB1A-201ENST00000398529 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
RAB1A-201ENST00000398529 AFAP1Q8N556 730 aa23.49■■□□□ 1.35
RAB1A-201ENST00000398529 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
RAB1A-201ENST00000398529 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
RAB1A-201ENST00000398529 UHRF1BP1Q6BDS2 1440 aa23.45■■□□□ 1.34
RAB1A-201ENST00000398529 KDM5CP41229 1560 aa23.44■■□□□ 1.34
RAB1A-201ENST00000398529 CDC42BPBQ9Y5S2 1711 aa23.39■■□□□ 1.33
RAB1A-201ENST00000398529 MLH3Q9UHC1 1453 aa23.38■■□□□ 1.33
RAB1A-201ENST00000398529 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
RAB1A-201ENST00000398529 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
RAB1A-201ENST00000398529 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
RAB1A-201ENST00000398529 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
RAB1A-201ENST00000398529 STRCQ7RTU9 1775 aa23.36■■□□□ 1.33
RAB1A-201ENST00000398529 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
RAB1A-201ENST00000398529 ABCA6Q8N139 1617 aa23.33■■□□□ 1.33
RAB1A-201ENST00000398529 C3P01024 1663 aa23.33■■□□□ 1.33
RAB1A-201ENST00000398529 ABCC1P33527 1531 aa23.31■■□□□ 1.32
RAB1A-201ENST00000398529 AGLP35573 1532 aa23.31■■□□□ 1.32
RAB1A-201ENST00000398529 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
RAB1A-201ENST00000398529 ITSN2Q9NZM3 1697 aa23.31■■□□□ 1.32
RAB1A-201ENST00000398529 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
RAB1A-201ENST00000398529 CNTLNQ9NXG0 1405 aa23.3■■□□□ 1.32
RAB1A-201ENST00000398529 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
RAB1A-201ENST00000398529 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
RAB1A-201ENST00000398529 PTPRTO14522 1441 aa23.28■■□□□ 1.32
RAB1A-201ENST00000398529 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
RAB1A-201ENST00000398529 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
RAB1A-201ENST00000398529 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
RAB1A-201ENST00000398529 SPAG9O60271 1321 aaKnown RBP23.22■■□□□ 1.31
RAB1A-201ENST00000398529 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
RAB1A-201ENST00000398529 MROH2AA6NES4 1674 aa23.18■■□□□ 1.3
RAB1A-201ENST00000398529 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
RAB1A-201ENST00000398529 NPATQ14207 1427 aa23.17■■□□□ 1.3
RAB1A-201ENST00000398529 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.34e-7■■■□□ 18.1
RAB1A-201ENST00000398529 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
RAB1A-201ENST00000398529 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
RAB1A-201ENST00000398529 CFDP1Q9UEE9 299 aaPredicted RBP23.16■■□□□ 1.3
RAB1A-201ENST00000398529 ZMYM3Q14202 1370 aa23.15■■□□□ 1.3
RAB1A-201ENST00000398529 PLEKHH2Q8IVE3 1493 aa23.15■■□□□ 1.3
RAB1A-201ENST00000398529 SYCP2Q9BX26 1530 aa23.14■■□□□ 1.3
RAB1A-201ENST00000398529 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.29
RAB1A-201ENST00000398529 CAMSAP1Q5T5Y3 1602 aa23.13■■□□□ 1.29
RAB1A-201ENST00000398529 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
RAB1A-201ENST00000398529 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
RAB1A-201ENST00000398529 KIAA1107Q9UPP5 1409 aa23.1■■□□□ 1.29
RAB1A-201ENST00000398529 ATP7AQ04656 1500 aa23.1■■□□□ 1.29
RAB1A-201ENST00000398529 SOCS7O14512 581 aa23.1■■□□□ 1.29
RAB1A-201ENST00000398529 LTBP4Q8N2S1 1624 aa23.1■■□□□ 1.29
RAB1A-201ENST00000398529 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
RAB1A-201ENST00000398529 GGT6Q6P531 493 aa23.09■■□□□ 1.29
RAB1A-201ENST00000398529 A2MP01023 1474 aa23.07■■□□□ 1.28
RAB1A-201ENST00000398529 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
RAB1A-201ENST00000398529 PKD2Q13563 968 aa23.07■■□□□ 1.28
RAB1A-201ENST00000398529 ILDR2Q71H61 639 aa23.07■■□□□ 1.28
RAB1A-201ENST00000398529 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
RAB1A-201ENST00000398529 SPATA31D1Q6ZQQ2 1576 aa23.06■■□□□ 1.28
RAB1A-201ENST00000398529 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
RAB1A-201ENST00000398529 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
RAB1A-201ENST00000398529 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
RAB1A-201ENST00000398529 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
RAB1A-201ENST00000398529 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
RAB1A-201ENST00000398529 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
RAB1A-201ENST00000398529 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
RAB1A-201ENST00000398529 PLA2R1Q13018 1463 aa23■■□□□ 1.27
RAB1A-201ENST00000398529 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
RAB1A-201ENST00000398529 CEP170BQ9Y4F5 1589 aaPredicted RBP22.99■■□□□ 1.27
RAB1A-201ENST00000398529 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
RAB1A-201ENST00000398529 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
RAB1A-201ENST00000398529 ZNF644Q9H582 1327 aaPredicted RBP22.92■■□□□ 1.26
RAB1A-201ENST00000398529 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
RAB1A-201ENST00000398529 EHBP1L1Q8N3D4 1523 aa22.91■■□□□ 1.26
RAB1A-201ENST00000398529 A2ML1A8K2U0 1454 aa22.9■■□□□ 1.26
RAB1A-201ENST00000398529 TIAM1Q13009 1591 aa22.89■■□□□ 1.26
RAB1A-201ENST00000398529 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.25
RAB1A-201ENST00000398529 KIF3BO15066 747 aa22.88■■□□□ 1.25
RAB1A-201ENST00000398529 RSPH4AQ5TD94 716 aa22.88■■□□□ 1.25
RAB1A-201ENST00000398529 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
RAB1A-201ENST00000398529 MBD5Q9P267 1494 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms