RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
MEG3-201ENST00000398460 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
MEG3-201ENST00000398460 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
MEG3-201ENST00000398460 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
MEG3-201ENST00000398460 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
MEG3-201ENST00000398460 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
MEG3-201ENST00000398460 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
MEG3-201ENST00000398460 WASHC2AQ641Q2 1341 aa16.79■□□□□ 0.28
MEG3-201ENST00000398460 WDR62O43379 1518 aa16.79■□□□□ 0.28
MEG3-201ENST00000398460 DAPK1P53355 1430 aa16.78■□□□□ 0.28
MEG3-201ENST00000398460 AKNAQ7Z591 1439 aa16.78■□□□□ 0.28
MEG3-201ENST00000398460 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
MEG3-201ENST00000398460 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
MEG3-201ENST00000398460 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
MEG3-201ENST00000398460 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
MEG3-201ENST00000398460 ABCC5O15440 1437 aa16.74■□□□□ 0.27
MEG3-201ENST00000398460 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
MEG3-201ENST00000398460 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
MEG3-201ENST00000398460 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
MEG3-201ENST00000398460 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
MEG3-201ENST00000398460 KDM6BO15054 1643 aa16.72■□□□□ 0.27
MEG3-201ENST00000398460 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
MEG3-201ENST00000398460 MRS2Q9HD23 443 aa16.71■□□□□ 0.27
MEG3-201ENST00000398460 NBPF8Q3BBV2 869 aa16.71■□□□□ 0.27
MEG3-201ENST00000398460 KIAA0556O60303 1618 aa16.71■□□□□ 0.27
MEG3-201ENST00000398460 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
MEG3-201ENST00000398460 ANKRD30BQ9BXX2 1392 aa16.7■□□□□ 0.26
MEG3-201ENST00000398460 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
MEG3-201ENST00000398460 PKD2Q13563 968 aa16.69■□□□□ 0.26
MEG3-201ENST00000398460 NBR1Q14596 966 aa16.69■□□□□ 0.26
MEG3-201ENST00000398460 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
MEG3-201ENST00000398460 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
MEG3-201ENST00000398460 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
MEG3-201ENST00000398460 TSPY4P0CV99 314 aa16.68■□□□□ 0.26
MEG3-201ENST00000398460 TSPY10P0CW01 314 aa16.68■□□□□ 0.26
MEG3-201ENST00000398460 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
MEG3-201ENST00000398460 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
MEG3-201ENST00000398460 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
MEG3-201ENST00000398460 DEKP35659 375 aaKnown RBP16.66■□□□□ 0.26
MEG3-201ENST00000398460 KDM5BQ9UGL1 1544 aa16.66■□□□□ 0.26
MEG3-201ENST00000398460 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
MEG3-201ENST00000398460 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
MEG3-201ENST00000398460 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
MEG3-201ENST00000398460 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.26
MEG3-201ENST00000398460 RPRD2Q5VT52 1461 aaKnown RBP16.64■□□□□ 0.25
MEG3-201ENST00000398460 CAMSAP2Q08AD1 1489 aa16.63■□□□□ 0.25
MEG3-201ENST00000398460 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
MEG3-201ENST00000398460 CCDC184Q52MB2 194 aa16.63■□□□□ 0.25
MEG3-201ENST00000398460 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
MEG3-201ENST00000398460 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
MEG3-201ENST00000398460 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
MEG3-201ENST00000398460 NCOA1Q15788 1441 aa16.61■□□□□ 0.25
MEG3-201ENST00000398460 NUP155O75694 1391 aa16.61■□□□□ 0.25
MEG3-201ENST00000398460 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
MEG3-201ENST00000398460 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
MEG3-201ENST00000398460 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.24
MEG3-201ENST00000398460 ANKRD50Q9ULJ7 1429 aa16.58■□□□□ 0.24
MEG3-201ENST00000398460 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
MEG3-201ENST00000398460 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
MEG3-201ENST00000398460 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
MEG3-201ENST00000398460 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
MEG3-201ENST00000398460 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
MEG3-201ENST00000398460 USP47Q96K76 1375 aa16.54■□□□□ 0.24
MEG3-201ENST00000398460 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
MEG3-201ENST00000398460 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
MEG3-201ENST00000398460 PZPP20742 1482 aa16.53■□□□□ 0.24
MEG3-201ENST00000398460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
MEG3-201ENST00000398460 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
MEG3-201ENST00000398460 PTPRGP23470 1445 aa16.51■□□□□ 0.23
MEG3-201ENST00000398460 KIF14Q15058 1648 aa16.51■□□□□ 0.23
MEG3-201ENST00000398460 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
MEG3-201ENST00000398460 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
MEG3-201ENST00000398460 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
MEG3-201ENST00000398460 NUP160Q12769 1436 aa16.49■□□□□ 0.23
MEG3-201ENST00000398460 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
MEG3-201ENST00000398460 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
MEG3-201ENST00000398460 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
MEG3-201ENST00000398460 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
MEG3-201ENST00000398460 ATP10BO94823 1461 aa16.48■□□□□ 0.23
MEG3-201ENST00000398460 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
MEG3-201ENST00000398460 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
MEG3-201ENST00000398460 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
MEG3-201ENST00000398460 ADGRL2O95490 1459 aa16.45■□□□□ 0.22
MEG3-201ENST00000398460 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
MEG3-201ENST00000398460 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
MEG3-201ENST00000398460 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
MEG3-201ENST00000398460 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
MEG3-201ENST00000398460 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
MEG3-201ENST00000398460 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
MEG3-201ENST00000398460 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
MEG3-201ENST00000398460 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
MEG3-201ENST00000398460 ADGBQ8N7X0 1667 aa16.39■□□□□ 0.21
MEG3-201ENST00000398460 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
MEG3-201ENST00000398460 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
MEG3-201ENST00000398460 ABCA8O94911 1581 aa16.37■□□□□ 0.21
MEG3-201ENST00000398460 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
MEG3-201ENST00000398460 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
MEG3-201ENST00000398460 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
MEG3-201ENST00000398460 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
MEG3-201ENST00000398460 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms