RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 SAMD9LQ8IVG5 1584 aa6.14□□□□□ -1.43
FNDC3A-202ENST00000398316 TROQ12816 1431 aaPredicted RBP6.14□□□□□ -1.43
FNDC3A-202ENST00000398316 AGLP35573 1532 aa6.14□□□□□ -1.43
FNDC3A-202ENST00000398316 LMTK2Q8IWU2 1503 aa6.13□□□□□ -1.43
FNDC3A-202ENST00000398316 PLEKHH2Q8IVE3 1493 aa6.13□□□□□ -1.43
FNDC3A-202ENST00000398316 CAMSAP2Q08AD1 1489 aa6.12□□□□□ -1.43
FNDC3A-202ENST00000398316 RTEL1-TNFRSF6BF6WH68 1400 aa6.11□□□□□ -1.43
FNDC3A-202ENST00000398316 KIDINS220Q9ULH0 1771 aa6.1□□□□□ -1.43
FNDC3A-202ENST00000398316 MROH1Q8NDA8 1641 aa6.1□□□□□ -1.43
FNDC3A-202ENST00000398316 IQGAP3Q86VI3 1631 aa6.1□□□□□ -1.43
FNDC3A-202ENST00000398316 ARHGEF40Q8TER5 1519 aa6.1□□□□□ -1.43
FNDC3A-202ENST00000398316 PRDM15P57071 1507 aaPredicted RBP6.09□□□□□ -1.43
FNDC3A-202ENST00000398316 ZFYVE16Q7Z3T8 1539 aa6.09□□□□□ -1.43
FNDC3A-202ENST00000398316 MBD5Q9P267 1494 aa6.09□□□□□ -1.43
FNDC3A-202ENST00000398316 ACIN1Q9UKV3 1341 aaKnown RBP6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 FHOD3Q2V2M9 1422 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 MLH3Q9UHC1 1453 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 HECW2Q9P2P5 1572 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 NCOA2Q15596 1464 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 IFT172Q9UG01 1749 aa6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 GPATCH8Q9UKJ3 1502 aaKnown RBP6.08□□□□□ -1.44
FNDC3A-202ENST00000398316 PLCH2O75038 1416 aa6.07□□□□□ -1.44
FNDC3A-202ENST00000398316 PIK3C2BO00750 1634 aa6.07□□□□□ -1.44
FNDC3A-202ENST00000398316 ZNF142P52746 1687 aaPredicted RBP6.07□□□□□ -1.44
FNDC3A-202ENST00000398316 PTPRGP23470 1445 aa6.06□□□□□ -1.44
FNDC3A-202ENST00000398316 ATP10AO60312 1499 aa6.06□□□□□ -1.44
FNDC3A-202ENST00000398316 OSCARQ8IYS5 282 aa6.06□□□□□ -1.44
FNDC3A-202ENST00000398316 MYOM3Q5VTT5 1437 aa6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 JPH4Q96JJ6 628 aa6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 TEX14Q8IWB6 1497 aa6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 DIP2CQ9Y2E4 1556 aa6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 CDK13Q14004 1512 aaKnown RBP6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 SIGLEC1Q9BZZ2 1709 aa6.05□□□□□ -1.44
FNDC3A-202ENST00000398316 ABCA6Q8N139 1617 aa6.04□□□□□ -1.44
FNDC3A-202ENST00000398316 ADAMTSL3P82987 1691 aa6.04□□□□□ -1.44
FNDC3A-202ENST00000398316 HRCP23327 699 aa6.04□□□□□ -1.44
FNDC3A-202ENST00000398316 TET3O43151 1660 aa6.04□□□□□ -1.44
FNDC3A-202ENST00000398316 LAMC1P11047 1609 aa6.03□□□□□ -1.44
FNDC3A-202ENST00000398316 ZNF518AQ6AHZ1 1483 aa6.03□□□□□ -1.44
FNDC3A-202ENST00000398316 ASXL2Q76L83 1435 aa6.02□□□□□ -1.45
FNDC3A-202ENST00000398316 KIAA1210Q9ULL0 1709 aa6.02□□□□□ -1.45
FNDC3A-202ENST00000398316 CEP152O94986 1710 aa6.02□□□□□ -1.45
FNDC3A-202ENST00000398316 FER1L4A9Z1Z3 1794 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 FGD6Q6ZV73 1430 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 ERBINQ96RT1 1412 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 MADDQ8WXG6 1647 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 DUOX2Q9NRD8 1548 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 POGZQ7Z3K3 1410 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 ARHGEF12Q9NZN5 1544 aa6.01□□□□□ -1.45
FNDC3A-202ENST00000398316 CHMP7Q8WUX9 453 aaPredicted RBP6□□□□□ -1.45
FNDC3A-202ENST00000398316 PRAG1Q86YV5 1406 aa6□□□□□ -1.45
FNDC3A-202ENST00000398316 DNAJC5Q9H3Z4 198 aa5.99□□□□□ -1.45
FNDC3A-202ENST00000398316 KDM6BO15054 1643 aa5.99□□□□□ -1.45
FNDC3A-202ENST00000398316 ATP7AQ04656 1500 aa5.99□□□□□ -1.45
FNDC3A-202ENST00000398316 POLR1AO95602 1720 aaPredicted RBP5.99□□□□□ -1.45
FNDC3A-202ENST00000398316 CCDC141Q6ZP82 1450 aa5.98□□□□□ -1.45
FNDC3A-202ENST00000398316 HFM1A2PYH4 1435 aa5.98□□□□□ -1.45
FNDC3A-202ENST00000398316 ARHGAP31Q2M1Z3 1444 aa5.98□□□□□ -1.45
FNDC3A-202ENST00000398316 CAMSAP1Q5T5Y3 1602 aa5.97□□□□□ -1.45
FNDC3A-202ENST00000398316 RPRD2Q5VT52 1461 aaKnown RBP5.97□□□□□ -1.45
FNDC3A-202ENST00000398316 SETD1AO15047 1707 aaKnown RBP5.97□□□□□ -1.45
FNDC3A-202ENST00000398316 SPHKAPQ2M3C7 1700 aa5.97□□□□□ -1.45
FNDC3A-202ENST00000398316 EFCAB6Q5THR3 1501 aa5.97□□□□□ -1.45
FNDC3A-202ENST00000398316 UGGT1Q9NYU2 1555 aa5.96□□□□□ -1.45
FNDC3A-202ENST00000398316 RIMS1Q86UR5 1692 aaKnown RBP5.96□□□□□ -1.45
FNDC3A-202ENST00000398316 SPATA31D1Q6ZQQ2 1576 aa5.96□□□□□ -1.46
FNDC3A-202ENST00000398316 DAPK1P53355 1430 aa5.95□□□□□ -1.46
FNDC3A-202ENST00000398316 KNDC1Q76NI1 1749 aa5.95□□□□□ -1.46
FNDC3A-202ENST00000398316 SYCP2Q9BX26 1530 aa5.95□□□□□ -1.46
FNDC3A-202ENST00000398316 E9PCH4 1651 aa5.95□□□□□ -1.46
FNDC3A-202ENST00000398316 RSPH4AQ5TD94 716 aa5.94□□□□□ -1.46
FNDC3A-202ENST00000398316 PREX1Q8TCU6 1659 aa5.94□□□□□ -1.46
FNDC3A-202ENST00000398316 ABCC5O15440 1437 aa5.94□□□□□ -1.46
FNDC3A-202ENST00000398316 MYO3AQ8NEV4 1616 aa5.94□□□□□ -1.46
FNDC3A-202ENST00000398316 DENND4BO75064 1496 aaPredicted RBP5.94□□□□□ -1.46
FNDC3A-202ENST00000398316 TRPM2O94759 1503 aa5.93□□□□□ -1.46
FNDC3A-202ENST00000398316 FANCAO15360 1455 aa5.92□□□□□ -1.46
FNDC3A-202ENST00000398316 FAM9AQ8IZU1 332 aaPredicted RBP5.92□□□□□ -1.46
FNDC3A-202ENST00000398316 PPLO60437 1756 aa5.92□□□□□ -1.46
FNDC3A-202ENST00000398316 PTPRTO14522 1441 aa5.92□□□□□ -1.46
FNDC3A-202ENST00000398316 NRXN1Q9ULB1 1477 aa5.92□□□□□ -1.46
FNDC3A-202ENST00000398316 AEBP2Q6ZN18 517 aaPredicted RBP5.91□□□□□ -1.46
FNDC3A-202ENST00000398316 USP54Q70EL1 1684 aa5.91□□□□□ -1.46
FNDC3A-202ENST00000398316 NCOA1Q15788 1441 aa5.9□□□□□ -1.46
FNDC3A-202ENST00000398316 C3P01024 1663 aa5.9□□□□□ -1.46
FNDC3A-202ENST00000398316 TMEM131LA2VDJ0 1609 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 NAIPQ13075 1403 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 ABCC3O15438 1527 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 ARHGAP5Q13017 1502 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 PTPRKQ15262 1439 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 C9orf84Q5VXU9 1444 aa5.89□□□□□ -1.47
FNDC3A-202ENST00000398316 ADGRB3O60242 1522 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 CCNB3Q8WWL7 1395 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 DIP2AQ14689 1571 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 CLSPNQ9HAW4 1339 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 PPP6R1Q9UPN7 881 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 UBR1Q8IWV7 1749 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 SETBP1Q9Y6X0 1596 aa5.88□□□□□ -1.47
FNDC3A-202ENST00000398316 PZPP20742 1482 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms