RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
NFIX-203ENST00000397661 IQGAP2Q13576 1575 aa30.1■■■□□ 2.41
NFIX-203ENST00000397661 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
NFIX-203ENST00000397661 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
NFIX-203ENST00000397661 MSH5O43196 834 aa30.07■■■□□ 2.4
NFIX-203ENST00000397661 CDK11AQ9UQ88 783 aaPredicted RBP30.07■■■□□ 2.4
NFIX-203ENST00000397661 PRKRIP1Q9H875 184 aaPredicted RBP30.06■■■□□ 2.4
NFIX-203ENST00000397661 HECW1Q76N89 1606 aa30.04■■■□□ 2.4
NFIX-203ENST00000397661 KDM2AQ9Y2K7 1162 aa30.04■■■□□ 2.4
NFIX-203ENST00000397661 PRG4Q92954 1404 aaPredicted RBP30.02■■■□□ 2.4
NFIX-203ENST00000397661 CCDC7Q96M83 1385 aa30■■■□□ 2.39
NFIX-203ENST00000397661 ARHGEF11O15085 1522 aa30■■■□□ 2.39
NFIX-203ENST00000397661 KIF7Q2M1P5 1343 aa29.99■■■□□ 2.39
NFIX-203ENST00000397661 ABCC5O15440 1437 aa29.99■■■□□ 2.39
NFIX-203ENST00000397661 DAPK1P53355 1430 aa29.99■■■□□ 2.39
NFIX-203ENST00000397661 PKD2Q13563 968 aa29.99■■■□□ 2.39
NFIX-203ENST00000397661 TCOF1Q13428 1488 aaKnown RBP29.98■■■□□ 2.39
NFIX-203ENST00000397661 ANKRD30BQ9BXX2 1392 aa29.97■■■□□ 2.39
NFIX-203ENST00000397661 B4GALNT3Q6L9W6 998 aa29.96■■■□□ 2.39
NFIX-203ENST00000397661 MIA2Q96PC5 1412 aa29.95■■■□□ 2.39
NFIX-203ENST00000397661 CNTLNQ9NXG0 1405 aa29.94■■■□□ 2.38
NFIX-203ENST00000397661 PBRM1Q86U86 1689 aa29.93■■■□□ 2.38
NFIX-203ENST00000397661 WDR62O43379 1518 aa29.92■■■□□ 2.38
NFIX-203ENST00000397661 ERICH6Q7L0X2 663 aa29.91■■■□□ 2.38
NFIX-203ENST00000397661 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
NFIX-203ENST00000397661 MRC2Q9UBG0 1479 aa29.9■■■□□ 2.38
NFIX-203ENST00000397661 NUP153P49790 1475 aaKnown RBP29.88■■■□□ 2.37
NFIX-203ENST00000397661 PLB1Q6P1J6 1458 aa29.88■■■□□ 2.37
NFIX-203ENST00000397661 SALL2Q9Y467 1007 aaPredicted RBP29.84■■■□□ 2.37
NFIX-203ENST00000397661 DISP1Q96F81 1524 aa29.84■■■□□ 2.37
NFIX-203ENST00000397661 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
NFIX-203ENST00000397661 NCOA1Q15788 1441 aa29.82■■■□□ 2.37
NFIX-203ENST00000397661 GCC2Q8IWJ2 1684 aa29.81■■■□□ 2.36
NFIX-203ENST00000397661 RPRD2Q5VT52 1461 aaKnown RBP29.81■■■□□ 2.36
NFIX-203ENST00000397661 HNRNPMP52272 730 aaKnown RBP eCLIP29.8■■■□□ 2.362e-9■■■■■ 31.7
NFIX-203ENST00000397661 KIAA0586Q9BVV6 1533 aa29.79■■■□□ 2.36
NFIX-203ENST00000397661 PLEKHD1A6NEE1 506 aa29.79■■■□□ 2.36
NFIX-203ENST00000397661 AKNAQ7Z591 1439 aa29.76■■■□□ 2.36
NFIX-203ENST00000397661 CARD11Q9BXL7 1154 aa29.76■■■□□ 2.35
NFIX-203ENST00000397661 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
NFIX-203ENST00000397661 RGL3Q3MIN7 710 aa29.76■■■□□ 2.35
NFIX-203ENST00000397661 NUP155O75694 1391 aa29.75■■■□□ 2.35
NFIX-203ENST00000397661 ROCK1Q13464 1354 aa29.74■■■□□ 2.35
NFIX-203ENST00000397661 DCAF11Q8TEB1 546 aa29.74■■■□□ 2.35
NFIX-203ENST00000397661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.74■■■□□ 2.351e-8■■■■■ 27.4
NFIX-203ENST00000397661 USP47Q96K76 1375 aa29.73■■■□□ 2.35
NFIX-203ENST00000397661 GRIN2AQ12879 1464 aa29.72■■■□□ 2.35
NFIX-203ENST00000397661 PPP4R2Q9NY27 417 aa29.72■■■□□ 2.35
NFIX-203ENST00000397661 TEX14Q8IWB6 1497 aa29.72■■■□□ 2.35
NFIX-203ENST00000397661 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
NFIX-203ENST00000397661 TSPY4P0CV99 314 aa29.71■■■□□ 2.35
NFIX-203ENST00000397661 TSPY10P0CW01 314 aa29.71■■■□□ 2.35
NFIX-203ENST00000397661 KIAA0556O60303 1618 aa29.71■■■□□ 2.35
NFIX-203ENST00000397661 CAMSAP2Q08AD1 1489 aa29.71■■■□□ 2.35
NFIX-203ENST00000397661 TROQ12816 1431 aaPredicted RBP29.69■■■□□ 2.34
NFIX-203ENST00000397661 TMC1Q8TDI8 760 aa29.68■■■□□ 2.34
NFIX-203ENST00000397661 ST20-MTHFSA0A0A6YYL1 179 aa29.67■■■□□ 2.34
NFIX-203ENST00000397661 ZBED9Q6R2W3 1325 aa29.67■■■□□ 2.34
NFIX-203ENST00000397661 PZPP20742 1482 aa29.66■■■□□ 2.34
NFIX-203ENST00000397661 GPATCH8Q9UKJ3 1502 aaKnown RBP29.65■■■□□ 2.34
NFIX-203ENST00000397661 RAPGEF6Q8TEU7 1601 aa29.65■■■□□ 2.34
NFIX-203ENST00000397661 ANKRD30AQ9BXX3 1397 aa29.65■■■□□ 2.34
NFIX-203ENST00000397661 DNMT1P26358 1616 aaKnown RBP29.63■■■□□ 2.33
NFIX-203ENST00000397661 SPATA31E1Q6ZUB1 1445 aa29.63■■■□□ 2.33
NFIX-203ENST00000397661 ANKRD50Q9ULJ7 1429 aa29.62■■■□□ 2.33
NFIX-203ENST00000397661 NBR1Q14596 966 aa29.61■■■□□ 2.33
NFIX-203ENST00000397661 KIF14Q15058 1648 aa29.61■■■□□ 2.33
NFIX-203ENST00000397661 FANCIQ9NVI1 1328 aa29.61■■■□□ 2.33
NFIX-203ENST00000397661 KIAA1107Q9UPP5 1409 aa29.59■■■□□ 2.33
NFIX-203ENST00000397661 EIF4G3O43432 1585 aaKnown RBP29.55■■■□□ 2.32
NFIX-203ENST00000397661 CARMIL2Q6F5E8 1435 aa29.53■■■□□ 2.32
NFIX-203ENST00000397661 DHX29Q7Z478 1369 aaKnown RBP29.51■■■□□ 2.32
NFIX-203ENST00000397661 CCDC136Q96JN2 1154 aa29.49■■■□□ 2.31
NFIX-203ENST00000397661 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
NFIX-203ENST00000397661 NBPF1Q3BBV0 1214 aa29.47■■■□□ 2.31
NFIX-203ENST00000397661 C9orf84Q5VXU9 1444 aa29.46■■■□□ 2.31
NFIX-203ENST00000397661 KIF15Q9NS87 1388 aa29.45■■■□□ 2.31
NFIX-203ENST00000397661 NUDCQ9Y266 331 aa29.45■■■□□ 2.3
NFIX-203ENST00000397661 PNISRQ8TF01 805 aaKnown RBP29.44■■■□□ 2.3
NFIX-203ENST00000397661 CC2D1BQ5T0F9 858 aaKnown RBP29.43■■■□□ 2.3
NFIX-203ENST00000397661 ROCK2O75116 1388 aaKnown RBP29.42■■■□□ 2.3
NFIX-203ENST00000397661 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
NFIX-203ENST00000397661 SYNJ2O15056 1496 aa29.41■■■□□ 2.3
NFIX-203ENST00000397661 ATP10BO94823 1461 aa29.4■■■□□ 2.3
NFIX-203ENST00000397661 DEKP35659 375 aaKnown RBP29.38■■■□□ 2.29
NFIX-203ENST00000397661 ERICH6BQ5W0A0 696 aa29.35■■■□□ 2.29
NFIX-203ENST00000397661 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
NFIX-203ENST00000397661 PAK3O75914 559 aaPredicted RBP29.33■■■□□ 2.29
NFIX-203ENST00000397661 PTPRGP23470 1445 aa29.32■■■□□ 2.28
NFIX-203ENST00000397661 NPM2Q86SE8 214 aaKnown RBP29.29■■■□□ 2.28
NFIX-203ENST00000397661 MBD5Q9P267 1494 aa29.29■■■□□ 2.28
NFIX-203ENST00000397661 CDCA7LQ96GN5 454 aa29.27■■■□□ 2.28
NFIX-203ENST00000397661 SMG6Q86US8 1419 aaKnown RBP29.26■■■□□ 2.28
NFIX-203ENST00000397661 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
NFIX-203ENST00000397661 ADGRL2O95490 1459 aa29.25■■■□□ 2.27
NFIX-203ENST00000397661 NOP58Q9Y2X3 529 aaKnown RBP29.25■■■□□ 2.27
NFIX-203ENST00000397661 MYBBP1AQ9BQG0 1328 aaKnown RBP29.24■■■□□ 2.27
NFIX-203ENST00000397661 EXOC6Q8TAG9 804 aa29.23■■■□□ 2.27
NFIX-203ENST00000397661 PLIN1O60240 522 aa29.23■■■□□ 2.27
NFIX-203ENST00000397661 MYT1LQ9UL68 1186 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms