RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 ARHGEF12Q9NZN5 1544 aa26.99■■□□□ 1.91
CUX2-202ENST00000397643 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
CUX2-202ENST00000397643 MLECQ14165 292 aa26.96■■□□□ 1.91
CUX2-202ENST00000397643 MYO5CQ9NQX4 1742 aa26.96■■□□□ 1.91
CUX2-202ENST00000397643 ATP10AO60312 1499 aa26.94■■□□□ 1.9
CUX2-202ENST00000397643 C9orf84Q5VXU9 1444 aa26.94■■□□□ 1.9
CUX2-202ENST00000397643 KIF14Q15058 1648 aa26.94■■□□□ 1.9
CUX2-202ENST00000397643 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
CUX2-202ENST00000397643 FMN1Q68DA7 1419 aa26.92■■□□□ 1.9
CUX2-202ENST00000397643 KDM5CP41229 1560 aa26.88■■□□□ 1.89
CUX2-202ENST00000397643 EFCAB2Q5VUJ9 269 aa26.88■■□□□ 1.89
CUX2-202ENST00000397643 PREX1Q8TCU6 1659 aa26.87■■□□□ 1.89
CUX2-202ENST00000397643 ZNF518AQ6AHZ1 1483 aa26.86■■□□□ 1.89
CUX2-202ENST00000397643 TROQ12816 1431 aaPredicted RBP26.85■■□□□ 1.89
CUX2-202ENST00000397643 CERKQ8TCT0 537 aa26.84■■□□□ 1.89
CUX2-202ENST00000397643 LRRIQ1Q96JM4 1722 aa26.83■■□□□ 1.89
CUX2-202ENST00000397643 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
CUX2-202ENST00000397643 ARHGAP5Q13017 1502 aa26.81■■□□□ 1.88
CUX2-202ENST00000397643 DIP2CQ9Y2E4 1556 aa26.81■■□□□ 1.88
CUX2-202ENST00000397643 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
CUX2-202ENST00000397643 CDK11AQ9UQ88 783 aaPredicted RBP26.81■■□□□ 1.88
CUX2-202ENST00000397643 CEBPAP49715 358 aaPredicted RBP26.8■■□□□ 1.88
CUX2-202ENST00000397643 AFAP1Q8N556 730 aa26.79■■□□□ 1.88
CUX2-202ENST00000397643 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
CUX2-202ENST00000397643 REREQ9P2R6 1566 aa26.79■■□□□ 1.88
CUX2-202ENST00000397643 STRCQ7RTU9 1775 aa26.76■■□□□ 1.88
CUX2-202ENST00000397643 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.87
CUX2-202ENST00000397643 ABCA6Q8N139 1617 aa26.76■■□□□ 1.87
CUX2-202ENST00000397643 CLIP1P30622 1438 aa26.75■■□□□ 1.87
CUX2-202ENST00000397643 MLH3Q9UHC1 1453 aa26.73■■□□□ 1.87
CUX2-202ENST00000397643 PREX2Q70Z35 1606 aa26.71■■□□□ 1.87
CUX2-202ENST00000397643 ABCC1P33527 1531 aa26.7■■□□□ 1.87
CUX2-202ENST00000397643 UHRF1BP1Q6BDS2 1440 aa26.7■■□□□ 1.86
CUX2-202ENST00000397643 TRAPPC8Q9Y2L5 1435 aa26.69■■□□□ 1.86
CUX2-202ENST00000397643 SETD1BQ9UPS6 1966 aaKnown RBP26.69■■□□□ 1.86
CUX2-202ENST00000397643 AGLP35573 1532 aa26.69■■□□□ 1.86
CUX2-202ENST00000397643 C3P01024 1663 aa26.68■■□□□ 1.86
CUX2-202ENST00000397643 ITSN2Q9NZM3 1697 aa26.66■■□□□ 1.86
CUX2-202ENST00000397643 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
CUX2-202ENST00000397643 KIDINS220Q9ULH0 1771 aa26.62■■□□□ 1.85
CUX2-202ENST00000397643 DMRT2Q9Y5R5 561 aa26.62■■□□□ 1.85
CUX2-202ENST00000397643 CCDC18Q5T9S5 1454 aa26.62■■□□□ 1.85
CUX2-202ENST00000397643 MYT1LQ9UL68 1186 aa26.61■■□□□ 1.85
CUX2-202ENST00000397643 CDC42BPAQ5VT25 1732 aa26.59■■□□□ 1.85
CUX2-202ENST00000397643 PTPRTO14522 1441 aa26.59■■□□□ 1.85
CUX2-202ENST00000397643 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
CUX2-202ENST00000397643 SAMD9LQ8IVG5 1584 aa26.54■■□□□ 1.84
CUX2-202ENST00000397643 CNTLNQ9NXG0 1405 aa26.53■■□□□ 1.84
CUX2-202ENST00000397643 LTBP4Q8N2S1 1624 aa26.52■■□□□ 1.84
CUX2-202ENST00000397643 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
CUX2-202ENST00000397643 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
CUX2-202ENST00000397643 MROH2AA6NES4 1674 aa26.48■■□□□ 1.83
CUX2-202ENST00000397643 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
CUX2-202ENST00000397643 SYCP2Q9BX26 1530 aa26.48■■□□□ 1.83
CUX2-202ENST00000397643 GPATCH8Q9UKJ3 1502 aaKnown RBP26.47■■□□□ 1.83
CUX2-202ENST00000397643 NPATQ14207 1427 aa26.45■■□□□ 1.82
CUX2-202ENST00000397643 DISP3Q9P2K9 1392 aa26.45■■□□□ 1.82
CUX2-202ENST00000397643 ILDR2Q71H61 639 aa26.44■■□□□ 1.82
CUX2-202ENST00000397643 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
CUX2-202ENST00000397643 IQSEC2Q5JU85 1478 aa26.42■■□□□ 1.82
CUX2-202ENST00000397643 CAMSAP1Q5T5Y3 1602 aa26.41■■□□□ 1.82
CUX2-202ENST00000397643 INO80Q9ULG1 1556 aaPredicted RBP26.41■■□□□ 1.82
CUX2-202ENST00000397643 ATP7AQ04656 1500 aa26.4■■□□□ 1.82
CUX2-202ENST00000397643 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
CUX2-202ENST00000397643 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.82
CUX2-202ENST00000397643 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
CUX2-202ENST00000397643 SPAG9O60271 1321 aaKnown RBP26.39■■□□□ 1.81
CUX2-202ENST00000397643 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
CUX2-202ENST00000397643 CLTCQ00610 1675 aaKnown RBP26.36■■□□□ 1.81
CUX2-202ENST00000397643 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
CUX2-202ENST00000397643 SPATA31D1Q6ZQQ2 1576 aa26.36■■□□□ 1.81
CUX2-202ENST00000397643 ZNF142P52746 1687 aaPredicted RBP26.35■■□□□ 1.81
CUX2-202ENST00000397643 MYO3AQ8NEV4 1616 aa26.34■■□□□ 1.81
CUX2-202ENST00000397643 A2MP01023 1474 aa26.34■■□□□ 1.81
CUX2-202ENST00000397643 PLEKHH2Q8IVE3 1493 aa26.33■■□□□ 1.81
CUX2-202ENST00000397643 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
CUX2-202ENST00000397643 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
CUX2-202ENST00000397643 SOCS7O14512 581 aa26.3■■□□□ 1.8
CUX2-202ENST00000397643 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
CUX2-202ENST00000397643 CFDP1Q9UEE9 299 aaPredicted RBP26.29■■□□□ 1.8
CUX2-202ENST00000397643 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
CUX2-202ENST00000397643 TCOF1Q13428 1488 aaKnown RBP26.28■■□□□ 1.8
CUX2-202ENST00000397643 CCNB3Q8WWL7 1395 aa26.27■■□□□ 1.8
CUX2-202ENST00000397643 ZNF335Q9H4Z2 1342 aaPredicted RBP26.26■■□□□ 1.79
CUX2-202ENST00000397643 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
CUX2-202ENST00000397643 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
CUX2-202ENST00000397643 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
CUX2-202ENST00000397643 PKD2Q13563 968 aa26.21■■□□□ 1.79
CUX2-202ENST00000397643 GGT6Q6P531 493 aa26.21■■□□□ 1.79
CUX2-202ENST00000397643 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.79
CUX2-202ENST00000397643 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
CUX2-202ENST00000397643 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
CUX2-202ENST00000397643 EHBP1L1Q8N3D4 1523 aa26.16■■□□□ 1.78
CUX2-202ENST00000397643 A2ML1A8K2U0 1454 aa26.16■■□□□ 1.78
CUX2-202ENST00000397643 DNMT1P26358 1616 aaKnown RBP26.15■■□□□ 1.78
CUX2-202ENST00000397643 RTEL1-TNFRSF6BF6WH68 1400 aa26.14■■□□□ 1.78
CUX2-202ENST00000397643 UBAP1LF5GYI3 381 aa26.13■■□□□ 1.77
CUX2-202ENST00000397643 CEP162Q5TB80 1403 aa26.12■■□□□ 1.77
CUX2-202ENST00000397643 DHX29Q7Z478 1369 aaKnown RBP26.1■■□□□ 1.77
CUX2-202ENST00000397643 NEURL4Q96JN8 1562 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms