RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 NUP153P49790 1475 aaKnown RBP11.33□□□□□ -0.6
CNTN4-201ENST00000397459 KDM5BQ9UGL1 1544 aa11.33□□□□□ -0.6
CNTN4-201ENST00000397459 RAPGEF6Q8TEU7 1601 aa11.33□□□□□ -0.6
CNTN4-201ENST00000397459 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
CNTN4-201ENST00000397459 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
CNTN4-201ENST00000397459 FKBP8Q14318 412 aa11.31□□□□□ -0.6
CNTN4-201ENST00000397459 PRG4Q92954 1404 aaPredicted RBP11.29□□□□□ -0.6
CNTN4-201ENST00000397459 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
CNTN4-201ENST00000397459 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
CNTN4-201ENST00000397459 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
CNTN4-201ENST00000397459 DNMT1P26358 1616 aaKnown RBP11.26□□□□□ -0.61
CNTN4-201ENST00000397459 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
CNTN4-201ENST00000397459 ABCA8O94911 1581 aa11.26□□□□□ -0.61
CNTN4-201ENST00000397459 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
CNTN4-201ENST00000397459 SHROOM2Q13796 1616 aa11.25□□□□□ -0.61
CNTN4-201ENST00000397459 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
CNTN4-201ENST00000397459 NCOA1Q15788 1441 aa11.25□□□□□ -0.61
CNTN4-201ENST00000397459 PTPRGP23470 1445 aa11.24□□□□□ -0.61
CNTN4-201ENST00000397459 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
CNTN4-201ENST00000397459 ITSN2Q9NZM3 1697 aa11.23□□□□□ -0.61
CNTN4-201ENST00000397459 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
CNTN4-201ENST00000397459 DAPK1P53355 1430 aa11.22□□□□□ -0.61
CNTN4-201ENST00000397459 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
CNTN4-201ENST00000397459 DENND4BO75064 1496 aaPredicted RBP11.21□□□□□ -0.61
CNTN4-201ENST00000397459 ATP10BO94823 1461 aa11.21□□□□□ -0.61
CNTN4-201ENST00000397459 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
CNTN4-201ENST00000397459 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.62
CNTN4-201ENST00000397459 MPHOSPH9Q99550 1183 aa11.21□□□□□ -0.62
CNTN4-201ENST00000397459 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.62
CNTN4-201ENST00000397459 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
CNTN4-201ENST00000397459 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
CNTN4-201ENST00000397459 CCDC7Q96M83 1385 aa11.2□□□□□ -0.62
CNTN4-201ENST00000397459 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
CNTN4-201ENST00000397459 TEX14Q8IWB6 1497 aa11.2□□□□□ -0.62
CNTN4-201ENST00000397459 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
CNTN4-201ENST00000397459 ADGRL2O95490 1459 aa11.19□□□□□ -0.62
CNTN4-201ENST00000397459 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
CNTN4-201ENST00000397459 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
CNTN4-201ENST00000397459 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
CNTN4-201ENST00000397459 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
CNTN4-201ENST00000397459 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
CNTN4-201ENST00000397459 KIF14Q15058 1648 aa11.18□□□□□ -0.62
CNTN4-201ENST00000397459 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
CNTN4-201ENST00000397459 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
CNTN4-201ENST00000397459 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
CNTN4-201ENST00000397459 ABCC5O15440 1437 aa11.16□□□□□ -0.62
CNTN4-201ENST00000397459 SPATA31E1Q6ZUB1 1445 aa11.16□□□□□ -0.62
CNTN4-201ENST00000397459 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
CNTN4-201ENST00000397459 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CNTN4-201ENST00000397459 BCANQ96GW7 911 aa11.15□□□□□ -0.62
CNTN4-201ENST00000397459 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
CNTN4-201ENST00000397459 CHIC2Q9UKJ5 165 aa11.15□□□□□ -0.62
CNTN4-201ENST00000397459 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.62
CNTN4-201ENST00000397459 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.62
CNTN4-201ENST00000397459 SHANK2Q9UPX8 1470 aa11.14□□□□□ -0.63
CNTN4-201ENST00000397459 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
CNTN4-201ENST00000397459 MBD5Q9P267 1494 aa11.14□□□□□ -0.63
CNTN4-201ENST00000397459 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
CNTN4-201ENST00000397459 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
CNTN4-201ENST00000397459 KDM6BO15054 1643 aa11.14□□□□□ -0.63
CNTN4-201ENST00000397459 L3MBTL2Q969R5 705 aa11.13□□□□□ -0.63
CNTN4-201ENST00000397459 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
CNTN4-201ENST00000397459 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
CNTN4-201ENST00000397459 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
CNTN4-201ENST00000397459 KIAA1107Q9UPP5 1409 aa11.12□□□□□ -0.63
CNTN4-201ENST00000397459 ABCC2Q92887 1545 aa11.12□□□□□ -0.63
CNTN4-201ENST00000397459 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
CNTN4-201ENST00000397459 CAMSAP2Q08AD1 1489 aa11.11□□□□□ -0.63
CNTN4-201ENST00000397459 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
CNTN4-201ENST00000397459 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CNTN4-201ENST00000397459 ANKRD30AQ9BXX3 1397 aa11.1□□□□□ -0.63
CNTN4-201ENST00000397459 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
CNTN4-201ENST00000397459 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
CNTN4-201ENST00000397459 PZPP20742 1482 aa11.1□□□□□ -0.63
CNTN4-201ENST00000397459 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
CNTN4-201ENST00000397459 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
CNTN4-201ENST00000397459 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
CNTN4-201ENST00000397459 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
CNTN4-201ENST00000397459 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
CNTN4-201ENST00000397459 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CNTN4-201ENST00000397459 KDM5CP41229 1560 aa11.05□□□□□ -0.64
CNTN4-201ENST00000397459 INSRP06213 1382 aa11.05□□□□□ -0.64
CNTN4-201ENST00000397459 ZCCHC11Q5TAX3 1644 aaKnown RBP11.05□□□□□ -0.64
CNTN4-201ENST00000397459 ARHGEF5Q12774 1597 aa11.05□□□□□ -0.64
CNTN4-201ENST00000397459 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
CNTN4-201ENST00000397459 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
CNTN4-201ENST00000397459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNTN4-201ENST00000397459 CDC42BPBQ9Y5S2 1711 aa11.03□□□□□ -0.64
CNTN4-201ENST00000397459 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
CNTN4-201ENST00000397459 USP47Q96K76 1375 aa11.03□□□□□ -0.64
CNTN4-201ENST00000397459 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
CNTN4-201ENST00000397459 DHX29Q7Z478 1369 aaKnown RBP11.02□□□□□ -0.64
CNTN4-201ENST00000397459 PREX2Q70Z35 1606 aa11.02□□□□□ -0.64
CNTN4-201ENST00000397459 ANKRD50Q9ULJ7 1429 aa11.02□□□□□ -0.65
CNTN4-201ENST00000397459 KIF15Q9NS87 1388 aa11.02□□□□□ -0.65
CNTN4-201ENST00000397459 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
CNTN4-201ENST00000397459 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
CNTN4-201ENST00000397459 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
CNTN4-201ENST00000397459 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
CNTN4-201ENST00000397459 SAMD9LQ8IVG5 1584 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms