RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 DAPK1P53355 1430 aa33.66■■■□□ 2.98
PABPN1-202ENST00000397276 DENND4BO75064 1496 aaPredicted RBP33.66■■■□□ 2.98
PABPN1-202ENST00000397276 CFDP1Q9UEE9 299 aaPredicted RBP33.64■■■□□ 2.98
PABPN1-202ENST00000397276 GCC2Q8IWJ2 1684 aa33.64■■■□□ 2.98
PABPN1-202ENST00000397276 ABCC5O15440 1437 aa33.64■■■□□ 2.98
PABPN1-202ENST00000397276 CARMIL2Q6F5E8 1435 aa33.63■■■□□ 2.97
PABPN1-202ENST00000397276 AKNAQ7Z591 1439 aa33.62■■■□□ 2.97
PABPN1-202ENST00000397276 TROQ12816 1431 aaPredicted RBP33.59■■■□□ 2.97
PABPN1-202ENST00000397276 NUP160Q12769 1436 aa33.59■■■□□ 2.97
PABPN1-202ENST00000397276 KDM5BQ9UGL1 1544 aa33.52■■■□□ 2.96
PABPN1-202ENST00000397276 ROCK1Q13464 1354 aa33.51■■■□□ 2.96
PABPN1-202ENST00000397276 SLC4A1APQ9BWU0 796 aaKnown RBP33.5■■■□□ 2.95
PABPN1-202ENST00000397276 DNMT1P26358 1616 aaKnown RBP33.5■■■□□ 2.95
PABPN1-202ENST00000397276 L3MBTL2Q969R5 705 aa33.49■■■□□ 2.95
PABPN1-202ENST00000397276 PLEKHD1A6NEE1 506 aa33.48■■■□□ 2.95
PABPN1-202ENST00000397276 ANP32CO43423 234 aa33.48■■■□□ 2.95
PABPN1-202ENST00000397276 KIF14Q15058 1648 aa33.47■■■□□ 2.95
PABPN1-202ENST00000397276 GPATCH8Q9UKJ3 1502 aaKnown RBP33.47■■■□□ 2.95
PABPN1-202ENST00000397276 CAMSAP2Q08AD1 1489 aa33.46■■■□□ 2.95
PABPN1-202ENST00000397276 HSPA5P11021 654 aaKnown RBP33.42■■■□□ 2.94
PABPN1-202ENST00000397276 TSHZ2Q9NRE2 1034 aa33.41■■■□□ 2.94
PABPN1-202ENST00000397276 ANKRD30BQ9BXX2 1392 aa33.37■■■□□ 2.93
PABPN1-202ENST00000397276 ATP10BO94823 1461 aa33.36■■■□□ 2.93
PABPN1-202ENST00000397276 NCOA1Q15788 1441 aa33.34■■■□□ 2.93
PABPN1-202ENST00000397276 EIF4G2P78344 907 aaKnown RBP eCLIP33.32■■■□□ 2.933e-7■■□□□ 12.5
PABPN1-202ENST00000397276 ABCA8O94911 1581 aa33.3■■■□□ 2.92
PABPN1-202ENST00000397276 ITSN2Q9NZM3 1697 aa33.3■■■□□ 2.92
PABPN1-202ENST00000397276 PTPRGP23470 1445 aa33.29■■■□□ 2.92
PABPN1-202ENST00000397276 NBPF8Q3BBV2 869 aa33.28■■■□□ 2.92
PABPN1-202ENST00000397276 WASHC2AQ641Q2 1341 aa33.28■■■□□ 2.92
PABPN1-202ENST00000397276 CCER2I3L3R5 266 aa33.27■■■□□ 2.92
PABPN1-202ENST00000397276 ADCY10Q96PN6 1610 aa33.26■■■□□ 2.91
PABPN1-202ENST00000397276 RPRD2Q5VT52 1461 aaKnown RBP33.25■■■□□ 2.91
PABPN1-202ENST00000397276 BCANQ96GW7 911 aa33.24■■■□□ 2.91
PABPN1-202ENST00000397276 ANKRD30AQ9BXX3 1397 aa33.24■■■□□ 2.91
PABPN1-202ENST00000397276 HNRNPMP52272 730 aaKnown RBP eCLIP33.23■■■□□ 2.91
PABPN1-202ENST00000397276 PZPP20742 1482 aa33.21■■■□□ 2.91
PABPN1-202ENST00000397276 PKD2Q13563 968 aa33.21■■■□□ 2.91
PABPN1-202ENST00000397276 ABCC10Q5T3U5 1492 aa33.18■■■□□ 2.9
PABPN1-202ENST00000397276 TSPY4P0CV99 314 aa33.18■■■□□ 2.9
PABPN1-202ENST00000397276 TSPY10P0CW01 314 aa33.18■■■□□ 2.9
PABPN1-202ENST00000397276 C11orf95C9JLR9 678 aaPredicted RBP33.17■■■□□ 2.9
PABPN1-202ENST00000397276 ANKRD50Q9ULJ7 1429 aa33.16■■■□□ 2.9
PABPN1-202ENST00000397276 ZNF326Q5BKZ1 582 aaKnown RBP33.15■■■□□ 2.9
PABPN1-202ENST00000397276 CDC42BPAQ5VT25 1732 aa33.15■■■□□ 2.9
PABPN1-202ENST00000397276 ADGRL2O95490 1459 aa33.14■■■□□ 2.9
PABPN1-202ENST00000397276 TEX14Q8IWB6 1497 aa33.14■■■□□ 2.89
PABPN1-202ENST00000397276 ADGBQ8N7X0 1667 aa33.12■■■□□ 2.89
PABPN1-202ENST00000397276 C9orf84Q5VXU9 1444 aa33.11■■■□□ 2.89
PABPN1-202ENST00000397276 NUP155O75694 1391 aa33.09■■■□□ 2.89
PABPN1-202ENST00000397276 CROCC2H7BZ55 1655 aa33.08■■■□□ 2.89
PABPN1-202ENST00000397276 KIAA1107Q9UPP5 1409 aa33.07■■■□□ 2.88
PABPN1-202ENST00000397276 CHD1O14646 1710 aa33.06■■■□□ 2.88
PABPN1-202ENST00000397276 ANP32EQ9BTT0 268 aa33.06■■■□□ 2.88
PABPN1-202ENST00000397276 FKBP8Q14318 412 aa33.03■■■□□ 2.88
PABPN1-202ENST00000397276 CCDC7Q96M83 1385 aa33■■■□□ 2.87
PABPN1-202ENST00000397276 KIF15Q9NS87 1388 aa32.99■■■□□ 2.87
PABPN1-202ENST00000397276 ERCC6L2Q5T890 1561 aa32.95■■■□□ 2.87
PABPN1-202ENST00000397276 SHANK2Q9UPX8 1470 aa32.94■■■□□ 2.86
PABPN1-202ENST00000397276 CNTLNQ9NXG0 1405 aa32.94■■■□□ 2.86
PABPN1-202ENST00000397276 MBD5Q9P267 1494 aa32.94■■■□□ 2.86
PABPN1-202ENST00000397276 POLR3GLQ9BT43 218 aa32.93■■■□□ 2.86
PABPN1-202ENST00000397276 KIF7Q2M1P5 1343 aa32.92■■■□□ 2.86
PABPN1-202ENST00000397276 HNRNPUQ00839 825 aaKnown RBP eCLIP32.92■■■□□ 2.86
PABPN1-202ENST00000397276 CCDC184Q52MB2 194 aa32.92■■■□□ 2.86
PABPN1-202ENST00000397276 KDM2AQ9Y2K7 1162 aa32.9■■■□□ 2.86
PABPN1-202ENST00000397276 SPATA31E1Q6ZUB1 1445 aa32.9■■■□□ 2.86
PABPN1-202ENST00000397276 CNGB1Q14028 1251 aaPredicted RBP32.89■■■□□ 2.86
PABPN1-202ENST00000397276 SAMD9LQ8IVG5 1584 aa32.88■■■□□ 2.85
PABPN1-202ENST00000397276 CCDC141Q6ZP82 1450 aa32.85■■■□□ 2.85
PABPN1-202ENST00000397276 CDC42BPBQ9Y5S2 1711 aa32.85■■■□□ 2.85
PABPN1-202ENST00000397276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.84■■■□□ 2.852e-11■□□□□ 10.7
PABPN1-202ENST00000397276 PRKRIP1Q9H875 184 aaPredicted RBP32.84■■■□□ 2.85
PABPN1-202ENST00000397276 ARHGAP5Q13017 1502 aa32.82■■■□□ 2.85
PABPN1-202ENST00000397276 ARHGEF5Q12774 1597 aa32.81■■■□□ 2.84
PABPN1-202ENST00000397276 USP47Q96K76 1375 aa32.81■■■□□ 2.84
PABPN1-202ENST00000397276 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
PABPN1-202ENST00000397276 RSPH4AQ5TD94 716 aa32.8■■■□□ 2.84
PABPN1-202ENST00000397276 PREX2Q70Z35 1606 aa32.8■■■□□ 2.84
PABPN1-202ENST00000397276 TTC37Q6PGP7 1564 aa32.8■■■□□ 2.84
PABPN1-202ENST00000397276 SYCP2Q9BX26 1530 aa32.79■■■□□ 2.84
PABPN1-202ENST00000397276 DCAF11Q8TEB1 546 aa32.79■■■□□ 2.84
PABPN1-202ENST00000397276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.78■■■□□ 2.843e-15■□□□□ 10.2
PABPN1-202ENST00000397276 FAM9BQ8IZU0 186 aa32.77■■■□□ 2.84
PABPN1-202ENST00000397276 NEFLP07196 543 aa32.77■■■□□ 2.84
PABPN1-202ENST00000397276 ABCC2Q92887 1545 aa32.75■■■□□ 2.83
PABPN1-202ENST00000397276 CARD11Q9BXL7 1154 aa32.75■■■□□ 2.83
PABPN1-202ENST00000397276 MRS2Q9HD23 443 aa32.74■■■□□ 2.83
PABPN1-202ENST00000397276 RGL3Q3MIN7 710 aa32.7■■■□□ 2.82
PABPN1-202ENST00000397276 KDM5DQ9BY66 1539 aa32.69■■■□□ 2.82
PABPN1-202ENST00000397276 RBM19Q9Y4C8 960 aaKnown RBP32.69■■■□□ 2.82
PABPN1-202ENST00000397276 FAM135AQ9P2D6 1515 aa32.67■■■□□ 2.82
PABPN1-202ENST00000397276 BCORL1Q5H9F3 1711 aa32.62■■■□□ 2.81
PABPN1-202ENST00000397276 UHRF1BP1Q6BDS2 1440 aa32.62■■■□□ 2.81
PABPN1-202ENST00000397276 ST20-MTHFSA0A0A6YYL1 179 aa32.61■■■□□ 2.81
PABPN1-202ENST00000397276 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
PABPN1-202ENST00000397276 ARHGEF12Q9NZN5 1544 aa32.6■■■□□ 2.81
PABPN1-202ENST00000397276 EFCAB2Q5VUJ9 269 aa32.59■■■□□ 2.81
PABPN1-202ENST00000397276 KDM5CP41229 1560 aa32.58■■■□□ 2.81
PABPN1-202ENST00000397276 RALGAPBQ86X10 1494 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms