RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
SEC13-209ENST00000397117 PLCH2O75038 1416 aa21.02■□□□□ 0.96
SEC13-209ENST00000397117 SCAPERQ9BY12 1400 aa21■□□□□ 0.95
SEC13-209ENST00000397117 HSPA2P54652 639 aa21■□□□□ 0.95
SEC13-209ENST00000397117 CLIP1P30622 1438 aa20.97■□□□□ 0.95
SEC13-209ENST00000397117 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
SEC13-209ENST00000397117 FER1L4A9Z1Z3 1794 aa20.96■□□□□ 0.95
SEC13-209ENST00000397117 MLECQ14165 292 aa20.96■□□□□ 0.95
SEC13-209ENST00000397117 ATP10AO60312 1499 aa20.94■□□□□ 0.94
SEC13-209ENST00000397117 MYO5CQ9NQX4 1742 aa20.94■□□□□ 0.94
SEC13-209ENST00000397117 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
SEC13-209ENST00000397117 FMN1Q68DA7 1419 aa20.92■□□□□ 0.94
SEC13-209ENST00000397117 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
SEC13-209ENST00000397117 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
SEC13-209ENST00000397117 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
SEC13-209ENST00000397117 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.94
SEC13-209ENST00000397117 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
SEC13-209ENST00000397117 KIF14Q15058 1648 aa20.88■□□□□ 0.93
SEC13-209ENST00000397117 CERKQ8TCT0 537 aa20.86■□□□□ 0.93
SEC13-209ENST00000397117 TROQ12816 1431 aaPredicted RBP20.85■□□□□ 0.93
SEC13-209ENST00000397117 PREX1Q8TCU6 1659 aa20.84■□□□□ 0.93
SEC13-209ENST00000397117 ZNF518AQ6AHZ1 1483 aa20.84■□□□□ 0.93
SEC13-209ENST00000397117 KDM5CP41229 1560 aa20.83■□□□□ 0.93
SEC13-209ENST00000397117 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.93
SEC13-209ENST00000397117 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
SEC13-209ENST00000397117 AFAP1Q8N556 730 aa20.83■□□□□ 0.93
SEC13-209ENST00000397117 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.93
SEC13-209ENST00000397117 ARHGAP5Q13017 1502 aa20.81■□□□□ 0.92
SEC13-209ENST00000397117 CDC42BPBQ9Y5S2 1711 aa20.8■□□□□ 0.92
SEC13-209ENST00000397117 STRCQ7RTU9 1775 aa20.78■□□□□ 0.92
SEC13-209ENST00000397117 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
SEC13-209ENST00000397117 REREQ9P2R6 1566 aa20.77■□□□□ 0.92
SEC13-209ENST00000397117 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
SEC13-209ENST00000397117 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
SEC13-209ENST00000397117 MYT1LQ9UL68 1186 aa20.73■□□□□ 0.91
SEC13-209ENST00000397117 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
SEC13-209ENST00000397117 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
SEC13-209ENST00000397117 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
SEC13-209ENST00000397117 TRAPPC8Q9Y2L5 1435 aa20.72■□□□□ 0.91
SEC13-209ENST00000397117 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
SEC13-209ENST00000397117 AGLP35573 1532 aa20.71■□□□□ 0.91
SEC13-209ENST00000397117 C3P01024 1663 aa20.71■□□□□ 0.91
SEC13-209ENST00000397117 ABCC1P33527 1531 aa20.7■□□□□ 0.9
SEC13-209ENST00000397117 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
SEC13-209ENST00000397117 ITSN2Q9NZM3 1697 aa20.69■□□□□ 0.9
SEC13-209ENST00000397117 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
SEC13-209ENST00000397117 CCDC18Q5T9S5 1454 aa20.67■□□□□ 0.9
SEC13-209ENST00000397117 CDC42BPAQ5VT25 1732 aa20.66■□□□□ 0.9
SEC13-209ENST00000397117 PTPRTO14522 1441 aa20.65■□□□□ 0.9
SEC13-209ENST00000397117 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
SEC13-209ENST00000397117 APLP2Q06481 763 aa20.6■□□□□ 0.89
SEC13-209ENST00000397117 CNTLNQ9NXG0 1405 aa20.6■□□□□ 0.89
SEC13-209ENST00000397117 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
SEC13-209ENST00000397117 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
SEC13-209ENST00000397117 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
SEC13-209ENST00000397117 MROH2AA6NES4 1674 aa20.56■□□□□ 0.88
SEC13-209ENST00000397117 LTBP4Q8N2S1 1624 aa20.56■□□□□ 0.88
SEC13-209ENST00000397117 ZNF777Q9ULD5 760 aaPredicted RBP20.55■□□□□ 0.88
SEC13-209ENST00000397117 NCOA1Q15788 1441 aa20.55■□□□□ 0.88
SEC13-209ENST00000397117 NPATQ14207 1427 aa20.53■□□□□ 0.88
SEC13-209ENST00000397117 HNRNPMP52272 730 aaKnown RBP eCLIP20.53■□□□□ 0.88
SEC13-209ENST00000397117 SPAG9O60271 1321 aaKnown RBP20.53■□□□□ 0.88
SEC13-209ENST00000397117 SYCP2Q9BX26 1530 aa20.53■□□□□ 0.88
SEC13-209ENST00000397117 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
SEC13-209ENST00000397117 SUPT6HQ7KZ85 1726 aaKnown RBP20.52■□□□□ 0.88
SEC13-209ENST00000397117 DISP3Q9P2K9 1392 aa20.51■□□□□ 0.87
SEC13-209ENST00000397117 ILDR2Q71H61 639 aa20.5■□□□□ 0.87
SEC13-209ENST00000397117 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
SEC13-209ENST00000397117 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
SEC13-209ENST00000397117 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
SEC13-209ENST00000397117 ATP7AQ04656 1500 aa20.48■□□□□ 0.87
SEC13-209ENST00000397117 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
SEC13-209ENST00000397117 PLXNC1O60486 1568 aa20.47■□□□□ 0.87
SEC13-209ENST00000397117 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
SEC13-209ENST00000397117 CLTCQ00610 1675 aaKnown RBP20.47■□□□□ 0.87
SEC13-209ENST00000397117 INO80Q9ULG1 1556 aaPredicted RBP20.47■□□□□ 0.87
SEC13-209ENST00000397117 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
SEC13-209ENST00000397117 A2MP01023 1474 aa20.45■□□□□ 0.86
SEC13-209ENST00000397117 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
SEC13-209ENST00000397117 CCNB3Q8WWL7 1395 aa20.43■□□□□ 0.86
SEC13-209ENST00000397117 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
SEC13-209ENST00000397117 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
SEC13-209ENST00000397117 SOCS7O14512 581 aa20.42■□□□□ 0.86
SEC13-209ENST00000397117 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
SEC13-209ENST00000397117 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
SEC13-209ENST00000397117 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
SEC13-209ENST00000397117 PLA2R1Q13018 1463 aa20.39■□□□□ 0.86
SEC13-209ENST00000397117 PKD2Q13563 968 aa20.39■□□□□ 0.86
SEC13-209ENST00000397117 GGT6Q6P531 493 aa20.39■□□□□ 0.86
SEC13-209ENST00000397117 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.85
SEC13-209ENST00000397117 TIAM1Q13009 1591 aa20.39■□□□□ 0.85
SEC13-209ENST00000397117 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
SEC13-209ENST00000397117 ZNF335Q9H4Z2 1342 aaPredicted RBP20.38■□□□□ 0.85
SEC13-209ENST00000397117 CEP170BQ9Y4F5 1589 aaPredicted RBP20.38■□□□□ 0.85
SEC13-209ENST00000397117 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
SEC13-209ENST00000397117 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
SEC13-209ENST00000397117 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
SEC13-209ENST00000397117 MBD5Q9P267 1494 aa20.36■□□□□ 0.85
SEC13-209ENST00000397117 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
SEC13-209ENST00000397117 RTEL1-TNFRSF6BF6WH68 1400 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms