RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ATP10AO60312 1499 aa22.63■■□□□ 1.21
SEC13-205ENST00000397101 FER1L4A9Z1Z3 1794 aa22.62■■□□□ 1.21
SEC13-205ENST00000397101 C9orf84Q5VXU9 1444 aa22.62■■□□□ 1.21
SEC13-205ENST00000397101 MLECQ14165 292 aa22.6■■□□□ 1.21
SEC13-205ENST00000397101 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
SEC13-205ENST00000397101 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
SEC13-205ENST00000397101 EFCAB2Q5VUJ9 269 aa22.59■■□□□ 1.21
SEC13-205ENST00000397101 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
SEC13-205ENST00000397101 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
SEC13-205ENST00000397101 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
SEC13-205ENST00000397101 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
SEC13-205ENST00000397101 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
SEC13-205ENST00000397101 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
SEC13-205ENST00000397101 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
SEC13-205ENST00000397101 KDM5CP41229 1560 aa22.5■■□□□ 1.19
SEC13-205ENST00000397101 REREQ9P2R6 1566 aa22.49■■□□□ 1.19
SEC13-205ENST00000397101 UHRF1BP1Q6BDS2 1440 aa22.48■■□□□ 1.19
SEC13-205ENST00000397101 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
SEC13-205ENST00000397101 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
SEC13-205ENST00000397101 TROQ12816 1431 aaPredicted RBP22.47■■□□□ 1.19
SEC13-205ENST00000397101 KIF14Q15058 1648 aa22.45■■□□□ 1.18
SEC13-205ENST00000397101 STRCQ7RTU9 1775 aa22.44■■□□□ 1.18
SEC13-205ENST00000397101 AFAP1Q8N556 730 aa22.44■■□□□ 1.18
SEC13-205ENST00000397101 MLH3Q9UHC1 1453 aa22.43■■□□□ 1.18
SEC13-205ENST00000397101 ARHGAP5Q13017 1502 aa22.42■■□□□ 1.18
SEC13-205ENST00000397101 ARHGAP35Q9NRY4 1499 aa22.42■■□□□ 1.18
SEC13-205ENST00000397101 PTPRTO14522 1441 aa22.42■■□□□ 1.18
SEC13-205ENST00000397101 CLIP1P30622 1438 aa22.42■■□□□ 1.18
SEC13-205ENST00000397101 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
SEC13-205ENST00000397101 AGLP35573 1532 aa22.41■■□□□ 1.18
SEC13-205ENST00000397101 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
SEC13-205ENST00000397101 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
SEC13-205ENST00000397101 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
SEC13-205ENST00000397101 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
SEC13-205ENST00000397101 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
SEC13-205ENST00000397101 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.17
SEC13-205ENST00000397101 ABCA6Q8N139 1617 aa22.33■■□□□ 1.17
SEC13-205ENST00000397101 SOCS7O14512 581 aa22.33■■□□□ 1.17
SEC13-205ENST00000397101 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
SEC13-205ENST00000397101 C3P01024 1663 aa22.33■■□□□ 1.16
SEC13-205ENST00000397101 ABCC1P33527 1531 aa22.31■■□□□ 1.16
SEC13-205ENST00000397101 CDC42BPBQ9Y5S2 1711 aa22.31■■□□□ 1.16
SEC13-205ENST00000397101 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
SEC13-205ENST00000397101 ESF1Q9H501 851 aaKnown RBP22.31■■□□□ 1.16
SEC13-205ENST00000397101 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
SEC13-205ENST00000397101 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
SEC13-205ENST00000397101 NCOA1Q15788 1441 aa22.28■■□□□ 1.16
SEC13-205ENST00000397101 CCDC18Q5T9S5 1454 aa22.27■■□□□ 1.16
SEC13-205ENST00000397101 NPATQ14207 1427 aa22.26■■□□□ 1.15
SEC13-205ENST00000397101 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
SEC13-205ENST00000397101 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
SEC13-205ENST00000397101 ITSN2Q9NZM3 1697 aa22.24■■□□□ 1.15
SEC13-205ENST00000397101 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
SEC13-205ENST00000397101 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
SEC13-205ENST00000397101 MROH2AA6NES4 1674 aa22.2■■□□□ 1.14
SEC13-205ENST00000397101 ZMYM3Q14202 1370 aa22.18■■□□□ 1.14
SEC13-205ENST00000397101 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
SEC13-205ENST00000397101 SAMD9LQ8IVG5 1584 aa22.16■■□□□ 1.14
SEC13-205ENST00000397101 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
SEC13-205ENST00000397101 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
SEC13-205ENST00000397101 PLA2R1Q13018 1463 aa22.14■■□□□ 1.13
SEC13-205ENST00000397101 KIAA1107Q9UPP5 1409 aa22.14■■□□□ 1.13
SEC13-205ENST00000397101 SPAG9O60271 1321 aaKnown RBP22.12■■□□□ 1.13
SEC13-205ENST00000397101 PKD2Q13563 968 aa22.12■■□□□ 1.13
SEC13-205ENST00000397101 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
SEC13-205ENST00000397101 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
SEC13-205ENST00000397101 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
SEC13-205ENST00000397101 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
SEC13-205ENST00000397101 PLXNC1O60486 1568 aa22.09■■□□□ 1.13
SEC13-205ENST00000397101 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
SEC13-205ENST00000397101 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
SEC13-205ENST00000397101 ZNF142P52746 1687 aaPredicted RBP22.07■■□□□ 1.12
SEC13-205ENST00000397101 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
SEC13-205ENST00000397101 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
SEC13-205ENST00000397101 ATP7AQ04656 1500 aa22.06■■□□□ 1.12
SEC13-205ENST00000397101 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
SEC13-205ENST00000397101 A2MP01023 1474 aa22.06■■□□□ 1.12
SEC13-205ENST00000397101 HNRNPMP52272 730 aaKnown RBP eCLIP22.05■■□□□ 1.12
SEC13-205ENST00000397101 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
SEC13-205ENST00000397101 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
SEC13-205ENST00000397101 CEP170BQ9Y4F5 1589 aaPredicted RBP22.04■■□□□ 1.12
SEC13-205ENST00000397101 MYO3AQ8NEV4 1616 aa22.03■■□□□ 1.12
SEC13-205ENST00000397101 SUPT6HQ7KZ85 1726 aaKnown RBP22.03■■□□□ 1.12
SEC13-205ENST00000397101 UBAP1LF5GYI3 381 aa22.02■■□□□ 1.12
SEC13-205ENST00000397101 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
SEC13-205ENST00000397101 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
SEC13-205ENST00000397101 GGT6Q6P531 493 aa21.98■■□□□ 1.11
SEC13-205ENST00000397101 CCNB3Q8WWL7 1395 aa21.98■■□□□ 1.11
SEC13-205ENST00000397101 A2ML1A8K2U0 1454 aa21.96■■□□□ 1.11
SEC13-205ENST00000397101 RTEL1-TNFRSF6BF6WH68 1400 aa21.95■■□□□ 1.1
SEC13-205ENST00000397101 ADGBQ8N7X0 1667 aa21.95■■□□□ 1.1
SEC13-205ENST00000397101 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
SEC13-205ENST00000397101 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
SEC13-205ENST00000397101 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
SEC13-205ENST00000397101 MTUS2Q5JR59 1369 aa21.9■■□□□ 1.1
SEC13-205ENST00000397101 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
SEC13-205ENST00000397101 CPS1P31327 1500 aa21.9■■□□□ 1.1
SEC13-205ENST00000397101 TOM1O60784 492 aa21.86■■□□□ 1.09
SEC13-205ENST00000397101 TNRQ92752 1358 aa21.85■■□□□ 1.09
SEC13-205ENST00000397101 PZPP20742 1482 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms