RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.1
ATP2A3-206ENST00000397043 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
ATP2A3-206ENST00000397043 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
ATP2A3-206ENST00000397043 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
ATP2A3-206ENST00000397043 PRKRIP1Q9H875 184 aaPredicted RBP21.87■■□□□ 1.09
ATP2A3-206ENST00000397043 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
ATP2A3-206ENST00000397043 MIA2Q96PC5 1412 aa21.86■■□□□ 1.09
ATP2A3-206ENST00000397043 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
ATP2A3-206ENST00000397043 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
ATP2A3-206ENST00000397043 CCDC7Q96M83 1385 aa21.84■■□□□ 1.09
ATP2A3-206ENST00000397043 DAPK1P53355 1430 aa21.83■■□□□ 1.09
ATP2A3-206ENST00000397043 CNTLNQ9NXG0 1405 aa21.82■■□□□ 1.08
ATP2A3-206ENST00000397043 ABCC5O15440 1437 aa21.81■■□□□ 1.08
ATP2A3-206ENST00000397043 KIF7Q2M1P5 1343 aa21.81■■□□□ 1.08
ATP2A3-206ENST00000397043 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
ATP2A3-206ENST00000397043 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
ATP2A3-206ENST00000397043 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
ATP2A3-206ENST00000397043 PKD2Q13563 968 aa21.8■■□□□ 1.08
ATP2A3-206ENST00000397043 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
ATP2A3-206ENST00000397043 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
ATP2A3-206ENST00000397043 WDR62O43379 1518 aa21.79■■□□□ 1.08
ATP2A3-206ENST00000397043 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
ATP2A3-206ENST00000397043 B4GALNT3Q6L9W6 998 aa21.76■■□□□ 1.07
ATP2A3-206ENST00000397043 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
ATP2A3-206ENST00000397043 AKNAQ7Z591 1439 aa21.75■■□□□ 1.07
ATP2A3-206ENST00000397043 NUP153P49790 1475 aaKnown RBP21.73■■□□□ 1.07
ATP2A3-206ENST00000397043 NCOA1Q15788 1441 aa21.72■■□□□ 1.07
ATP2A3-206ENST00000397043 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
ATP2A3-206ENST00000397043 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
ATP2A3-206ENST00000397043 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
ATP2A3-206ENST00000397043 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
ATP2A3-206ENST00000397043 ROCK1Q13464 1354 aa21.7■■□□□ 1.06
ATP2A3-206ENST00000397043 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
ATP2A3-206ENST00000397043 DISP1Q96F81 1524 aa21.69■■□□□ 1.06
ATP2A3-206ENST00000397043 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
ATP2A3-206ENST00000397043 ERCC6Q03468 1493 aa21.67■■□□□ 1.06
ATP2A3-206ENST00000397043 PPP4R2Q9NY27 417 aa21.67■■□□□ 1.06
ATP2A3-206ENST00000397043 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
ATP2A3-206ENST00000397043 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
ATP2A3-206ENST00000397043 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
ATP2A3-206ENST00000397043 CARD11Q9BXL7 1154 aa21.66■■□□□ 1.06
ATP2A3-206ENST00000397043 NUP155O75694 1391 aa21.65■■□□□ 1.06
ATP2A3-206ENST00000397043 USP47Q96K76 1375 aa21.65■■□□□ 1.06
ATP2A3-206ENST00000397043 KIAA0556O60303 1618 aa21.64■■□□□ 1.05
ATP2A3-206ENST00000397043 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
ATP2A3-206ENST00000397043 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
ATP2A3-206ENST00000397043 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 ZBED9Q6R2W3 1325 aa21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 CAMSAP2Q08AD1 1489 aa21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
ATP2A3-206ENST00000397043 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
ATP2A3-206ENST00000397043 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
ATP2A3-206ENST00000397043 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
ATP2A3-206ENST00000397043 DNMT1P26358 1616 aaKnown RBP21.6■■□□□ 1.05
ATP2A3-206ENST00000397043 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
ATP2A3-206ENST00000397043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.05
ATP2A3-206ENST00000397043 MSH5O43196 834 aa21.58■■□□□ 1.04
ATP2A3-206ENST00000397043 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
ATP2A3-206ENST00000397043 GPATCH8Q9UKJ3 1502 aaKnown RBP21.57■■□□□ 1.04
ATP2A3-206ENST00000397043 PZPP20742 1482 aa21.57■■□□□ 1.04
ATP2A3-206ENST00000397043 CARMIL2Q6F5E8 1435 aa21.56■■□□□ 1.04
ATP2A3-206ENST00000397043 KIAA1107Q9UPP5 1409 aa21.56■■□□□ 1.04
ATP2A3-206ENST00000397043 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
ATP2A3-206ENST00000397043 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
ATP2A3-206ENST00000397043 KIF14Q15058 1648 aa21.51■■□□□ 1.03
ATP2A3-206ENST00000397043 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
ATP2A3-206ENST00000397043 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
ATP2A3-206ENST00000397043 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
ATP2A3-206ENST00000397043 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
ATP2A3-206ENST00000397043 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
ATP2A3-206ENST00000397043 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
ATP2A3-206ENST00000397043 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
ATP2A3-206ENST00000397043 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
ATP2A3-206ENST00000397043 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
ATP2A3-206ENST00000397043 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
ATP2A3-206ENST00000397043 PNISRQ8TF01 805 aaKnown RBP21.41■■□□□ 1.02
ATP2A3-206ENST00000397043 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
ATP2A3-206ENST00000397043 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
ATP2A3-206ENST00000397043 CC2D1BQ5T0F9 858 aaKnown RBP21.38■■□□□ 1.01
ATP2A3-206ENST00000397043 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
ATP2A3-206ENST00000397043 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
ATP2A3-206ENST00000397043 BCL11AQ9H165 835 aa21.37■■□□□ 1.01
ATP2A3-206ENST00000397043 ATP10BO94823 1461 aa21.37■■□□□ 1.01
ATP2A3-206ENST00000397043 BCORL1Q5H9F3 1711 aa21.36■■□□□ 1.01
ATP2A3-206ENST00000397043 PTPRGP23470 1445 aa21.34■■□□□ 1.01
ATP2A3-206ENST00000397043 ADGRL2O95490 1459 aa21.33■■□□□ 1.01
ATP2A3-206ENST00000397043 SMG6Q86US8 1419 aaKnown RBP21.33■■□□□ 1
ATP2A3-206ENST00000397043 MBD5Q9P267 1494 aa21.32■■□□□ 1
ATP2A3-206ENST00000397043 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
ATP2A3-206ENST00000397043 ARID4BQ4LE39 1312 aaPredicted RBP21.31■■□□□ 1
ATP2A3-206ENST00000397043 NBR1Q14596 966 aa21.3■■□□□ 1
ATP2A3-206ENST00000397043 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
ATP2A3-206ENST00000397043 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
ATP2A3-206ENST00000397043 RALBP1Q15311 655 aa21.28■■□□□ 1
ATP2A3-206ENST00000397043 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
ATP2A3-206ENST00000397043 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
ATP2A3-206ENST00000397043 KDM5CP41229 1560 aa21.26■□□□□ 0.99
ATP2A3-206ENST00000397043 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms