RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
ITGA4-203ENST00000397033 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
ITGA4-203ENST00000397033 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
ITGA4-203ENST00000397033 NCOA2Q15596 1464 aa16.28■□□□□ 0.2
ITGA4-203ENST00000397033 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
ITGA4-203ENST00000397033 GGT6Q6P531 493 aa16.28■□□□□ 0.2
ITGA4-203ENST00000397033 CASKIN1Q8WXD9 1431 aa16.27■□□□□ 0.19
ITGA4-203ENST00000397033 NEUROD2Q15784 382 aa16.27■□□□□ 0.19
ITGA4-203ENST00000397033 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
ITGA4-203ENST00000397033 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
ITGA4-203ENST00000397033 MSH5O43196 834 aa16.26■□□□□ 0.19
ITGA4-203ENST00000397033 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
ITGA4-203ENST00000397033 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
ITGA4-203ENST00000397033 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
ITGA4-203ENST00000397033 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
ITGA4-203ENST00000397033 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
ITGA4-203ENST00000397033 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
ITGA4-203ENST00000397033 MLECQ14165 292 aa16.21■□□□□ 0.19
ITGA4-203ENST00000397033 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
ITGA4-203ENST00000397033 TIAM1Q13009 1591 aa16.2■□□□□ 0.18
ITGA4-203ENST00000397033 PTPRGP23470 1445 aa16.2■□□□□ 0.18
ITGA4-203ENST00000397033 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
ITGA4-203ENST00000397033 KIF3BO15066 747 aa16.19■□□□□ 0.18
ITGA4-203ENST00000397033 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
ITGA4-203ENST00000397033 CCDC184Q52MB2 194 aa16.19■□□□□ 0.18
ITGA4-203ENST00000397033 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
ITGA4-203ENST00000397033 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
ITGA4-203ENST00000397033 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
ITGA4-203ENST00000397033 SNAPC4Q5SXM2 1469 aa16.18■□□□□ 0.18
ITGA4-203ENST00000397033 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
ITGA4-203ENST00000397033 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
ITGA4-203ENST00000397033 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
ITGA4-203ENST00000397033 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
ITGA4-203ENST00000397033 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
ITGA4-203ENST00000397033 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
ITGA4-203ENST00000397033 PCF11O94913 1555 aaKnown RBP16.15■□□□□ 0.18
ITGA4-203ENST00000397033 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
ITGA4-203ENST00000397033 ROCK2O75116 1388 aaKnown RBP16.15■□□□□ 0.18
ITGA4-203ENST00000397033 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
ITGA4-203ENST00000397033 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
ITGA4-203ENST00000397033 NEFMP07197 916 aa16.14■□□□□ 0.17
ITGA4-203ENST00000397033 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
ITGA4-203ENST00000397033 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
ITGA4-203ENST00000397033 STK26Q9P289 416 aa16.13■□□□□ 0.17
ITGA4-203ENST00000397033 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
ITGA4-203ENST00000397033 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
ITGA4-203ENST00000397033 KIF7Q2M1P5 1343 aa16.09■□□□□ 0.17
ITGA4-203ENST00000397033 PTPRKQ15262 1439 aa16.08■□□□□ 0.17
ITGA4-203ENST00000397033 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
ITGA4-203ENST00000397033 ARXQ96QS3 562 aa16.08■□□□□ 0.16
ITGA4-203ENST00000397033 TMF1P82094 1093 aa16.08■□□□□ 0.16
ITGA4-203ENST00000397033 NAIPQ13075 1403 aa16.07■□□□□ 0.16
ITGA4-203ENST00000397033 USP47Q96K76 1375 aa16.06■□□□□ 0.16
ITGA4-203ENST00000397033 NBPF1Q3BBV0 1214 aa16.06■□□□□ 0.16
ITGA4-203ENST00000397033 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-203ENST00000397033 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
ITGA4-203ENST00000397033 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-203ENST00000397033 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
ITGA4-203ENST00000397033 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-203ENST00000397033 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
ITGA4-203ENST00000397033 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
ITGA4-203ENST00000397033 CUL7Q14999 1698 aa16.04■□□□□ 0.16
ITGA4-203ENST00000397033 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
ITGA4-203ENST00000397033 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
ITGA4-203ENST00000397033 CCDC146Q8IYE0 955 aa16.02■□□□□ 0.16
ITGA4-203ENST00000397033 PANK3Q9H999 370 aa16.02■□□□□ 0.16
ITGA4-203ENST00000397033 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
ITGA4-203ENST00000397033 IPO9Q96P70 1041 aaKnown RBP16.02■□□□□ 0.15
ITGA4-203ENST00000397033 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
ITGA4-203ENST00000397033 TRAK1Q9UPV9 953 aa16.01■□□□□ 0.15
ITGA4-203ENST00000397033 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
ITGA4-203ENST00000397033 KIAA0586Q9BVV6 1533 aa16.01■□□□□ 0.15
ITGA4-203ENST00000397033 SOX12O15370 315 aa16.01■□□□□ 0.15
ITGA4-203ENST00000397033 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
ITGA4-203ENST00000397033 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
ITGA4-203ENST00000397033 PLIN1O60240 522 aa15.99■□□□□ 0.15
ITGA4-203ENST00000397033 CCDC7Q96M83 1385 aa15.99■□□□□ 0.15
ITGA4-203ENST00000397033 RGS3P49796 1198 aa15.98■□□□□ 0.15
ITGA4-203ENST00000397033 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
ITGA4-203ENST00000397033 POGKQ9P215 609 aa15.98■□□□□ 0.15
ITGA4-203ENST00000397033 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
ITGA4-203ENST00000397033 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
ITGA4-203ENST00000397033 IQGAP2Q13576 1575 aa15.97■□□□□ 0.15
ITGA4-203ENST00000397033 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
ITGA4-203ENST00000397033 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
ITGA4-203ENST00000397033 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
ITGA4-203ENST00000397033 MAGI1Q96QZ7 1491 aaPredicted RBP15.94■□□□□ 0.14
ITGA4-203ENST00000397033 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
ITGA4-203ENST00000397033 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
ITGA4-203ENST00000397033 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
ITGA4-203ENST00000397033 WASHC2CQ9Y4E1 1318 aa15.93■□□□□ 0.14
ITGA4-203ENST00000397033 CDCA8Q53HL2 280 aa15.93■□□□□ 0.14
ITGA4-203ENST00000397033 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
ITGA4-203ENST00000397033 KANK1Q14678 1352 aa15.92■□□□□ 0.14
ITGA4-203ENST00000397033 MAPKBP1O60336 1514 aa15.92■□□□□ 0.14
ITGA4-203ENST00000397033 DAPK1P53355 1430 aa15.92■□□□□ 0.14
ITGA4-203ENST00000397033 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
ITGA4-203ENST00000397033 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
ITGA4-203ENST00000397033 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
ITGA4-203ENST00000397033 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms