RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
GAPDH-202ENST00000396856 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
GAPDH-202ENST00000396856 MLECQ14165 292 aa19.79■□□□□ 0.76
GAPDH-202ENST00000396856 STRCQ7RTU9 1775 aa19.78■□□□□ 0.76
GAPDH-202ENST00000396856 ZFYVE16Q7Z3T8 1539 aa19.77■□□□□ 0.76
GAPDH-202ENST00000396856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.751e-323■■■□□ 18.8
GAPDH-202ENST00000396856 ARHGEF12Q9NZN5 1544 aa19.76■□□□□ 0.75
GAPDH-202ENST00000396856 CEBPAP49715 358 aaPredicted RBP19.75■□□□□ 0.75
GAPDH-202ENST00000396856 DMRT2Q9Y5R5 561 aa19.75■□□□□ 0.75
GAPDH-202ENST00000396856 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
GAPDH-202ENST00000396856 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
GAPDH-202ENST00000396856 CDK13Q14004 1512 aaKnown RBP19.73■□□□□ 0.75
GAPDH-202ENST00000396856 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
GAPDH-202ENST00000396856 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
GAPDH-202ENST00000396856 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.75
GAPDH-202ENST00000396856 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
GAPDH-202ENST00000396856 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
GAPDH-202ENST00000396856 ATP10AO60312 1499 aa19.69■□□□□ 0.74
GAPDH-202ENST00000396856 SCAPERQ9BY12 1400 aa19.68■□□□□ 0.74
GAPDH-202ENST00000396856 PTPRTO14522 1441 aa19.67■□□□□ 0.74
GAPDH-202ENST00000396856 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
GAPDH-202ENST00000396856 PLCH2O75038 1416 aa19.65■□□□□ 0.74
GAPDH-202ENST00000396856 SETD1BQ9UPS6 1966 aaKnown RBP19.63■□□□□ 0.73
GAPDH-202ENST00000396856 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
GAPDH-202ENST00000396856 UHRF1BP1Q6BDS2 1440 aa19.62■□□□□ 0.73
GAPDH-202ENST00000396856 CLIP1P30622 1438 aa19.6■□□□□ 0.73
GAPDH-202ENST00000396856 TROQ12816 1431 aaPredicted RBP19.6■□□□□ 0.73
GAPDH-202ENST00000396856 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
GAPDH-202ENST00000396856 IQSEC2Q5JU85 1478 aa19.59■□□□□ 0.73
GAPDH-202ENST00000396856 CCDC18Q5T9S5 1454 aa19.59■□□□□ 0.73
GAPDH-202ENST00000396856 KIF14Q15058 1648 aa19.58■□□□□ 0.73
GAPDH-202ENST00000396856 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
GAPDH-202ENST00000396856 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
GAPDH-202ENST00000396856 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
GAPDH-202ENST00000396856 AFAP1Q8N556 730 aa19.54■□□□□ 0.72
GAPDH-202ENST00000396856 LRRIQ1Q96JM4 1722 aa19.54■□□□□ 0.72
GAPDH-202ENST00000396856 KDM5CP41229 1560 aa19.51■□□□□ 0.71
GAPDH-202ENST00000396856 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
GAPDH-202ENST00000396856 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
GAPDH-202ENST00000396856 C3P01024 1663 aa19.5■□□□□ 0.71
GAPDH-202ENST00000396856 REREQ9P2R6 1566 aa19.49■□□□□ 0.71
GAPDH-202ENST00000396856 ZNF518AQ6AHZ1 1483 aa19.49■□□□□ 0.71
GAPDH-202ENST00000396856 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
GAPDH-202ENST00000396856 DIP2CQ9Y2E4 1556 aa19.47■□□□□ 0.71
GAPDH-202ENST00000396856 AGLP35573 1532 aa19.44■□□□□ 0.7
GAPDH-202ENST00000396856 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
GAPDH-202ENST00000396856 PREX2Q70Z35 1606 aa19.42■□□□□ 0.7
GAPDH-202ENST00000396856 UBAP1LF5GYI3 381 aa19.41■□□□□ 0.7
GAPDH-202ENST00000396856 ZNF335Q9H4Z2 1342 aaPredicted RBP19.41■□□□□ 0.7
GAPDH-202ENST00000396856 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
GAPDH-202ENST00000396856 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
GAPDH-202ENST00000396856 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
GAPDH-202ENST00000396856 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
GAPDH-202ENST00000396856 CAMSAP1Q5T5Y3 1602 aa19.39■□□□□ 0.69
GAPDH-202ENST00000396856 NPATQ14207 1427 aa19.36■□□□□ 0.69
GAPDH-202ENST00000396856 ABCC1P33527 1531 aa19.35■□□□□ 0.69
GAPDH-202ENST00000396856 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
GAPDH-202ENST00000396856 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
GAPDH-202ENST00000396856 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
GAPDH-202ENST00000396856 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
GAPDH-202ENST00000396856 ZMYM3Q14202 1370 aa19.33■□□□□ 0.69
GAPDH-202ENST00000396856 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.68
GAPDH-202ENST00000396856 GPATCH8Q9UKJ3 1502 aaKnown RBP19.32■□□□□ 0.68
GAPDH-202ENST00000396856 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
GAPDH-202ENST00000396856 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
GAPDH-202ENST00000396856 PKD2Q13563 968 aa19.3■□□□□ 0.68
GAPDH-202ENST00000396856 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
GAPDH-202ENST00000396856 ITSN2Q9NZM3 1697 aa19.3■□□□□ 0.68
GAPDH-202ENST00000396856 HSPA1LP34931 641 aa19.29■□□□□ 0.68
GAPDH-202ENST00000396856 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
GAPDH-202ENST00000396856 MROH2AA6NES4 1674 aa19.28■□□□□ 0.68
GAPDH-202ENST00000396856 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
GAPDH-202ENST00000396856 ZNF777Q9ULD5 760 aaPredicted RBP19.28■□□□□ 0.68
GAPDH-202ENST00000396856 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
GAPDH-202ENST00000396856 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
GAPDH-202ENST00000396856 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.68
GAPDH-202ENST00000396856 SAMD9LQ8IVG5 1584 aa19.26■□□□□ 0.67
GAPDH-202ENST00000396856 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
GAPDH-202ENST00000396856 SYCP2Q9BX26 1530 aa19.24■□□□□ 0.67
GAPDH-202ENST00000396856 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
GAPDH-202ENST00000396856 ZNF142P52746 1687 aaPredicted RBP19.23■□□□□ 0.67
GAPDH-202ENST00000396856 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
GAPDH-202ENST00000396856 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
GAPDH-202ENST00000396856 HNRNPMP52272 730 aaKnown RBP eCLIP19.2■□□□□ 0.66
GAPDH-202ENST00000396856 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
GAPDH-202ENST00000396856 SPAG9O60271 1321 aaKnown RBP19.2■□□□□ 0.66
GAPDH-202ENST00000396856 CEP170BQ9Y4F5 1589 aaPredicted RBP19.19■□□□□ 0.66
GAPDH-202ENST00000396856 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
GAPDH-202ENST00000396856 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
GAPDH-202ENST00000396856 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
GAPDH-202ENST00000396856 TOM1O60784 492 aa19.16■□□□□ 0.66
GAPDH-202ENST00000396856 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
GAPDH-202ENST00000396856 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
GAPDH-202ENST00000396856 ALKQ9UM73 1620 aa19.14■□□□□ 0.66
GAPDH-202ENST00000396856 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.66
GAPDH-202ENST00000396856 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
GAPDH-202ENST00000396856 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
GAPDH-202ENST00000396856 INO80Q9ULG1 1556 aaPredicted RBP19.14■□□□□ 0.65
GAPDH-202ENST00000396856 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
GAPDH-202ENST00000396856 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms